EnhancerDB
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  3. vista3406[chr1:154972628-154972915]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3406[chr1:154972628-154972915]
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Tissue distribution of vista3406
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Transcription factor that possibly regulate vista3406[chr1:154972628-154972915]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154971399 154975557 POLR2A UCSC Txn Factor no Conserved 107833641
chr1 154971399 154975557 POLR2A UCSC Txn Factor no Conserved 107833642
chr1 154971399 154975557 POLR2A UCSC Txn Factor no Conserved 107833643
chr1 154972071 154972816 MYC UCSC Txn Factor no Conserved 107833646
chr1 154972080 154972722 MAX UCSC Txn Factor no Conserved 107833653
chr1 154972507 154972789 EGR1 UCSC Txn Factor no Conserved 107833964
chr1 154972643 154972648 SP1 TRANSFAC yes 32325793
chr1 154972643 154972648 SP1 TRANSFAC yes 118374499
chr1 154972643 154972649 SP1 TRANSFAC yes 32325794
chr1 154972643 154972649 SP1 TRANSFAC yes 118374500
chr1 154972645 154972655 SP1 JASPAR yes 32325795
chr1 154972645 154972655 SP1 JASPAR yes 118374501
chr1 154972646 154972654 SP1 TRANSFAC yes 32325796
chr1 154972646 154972654 SP1 TRANSFAC yes 118374502
chr1 154972647 154972652 SP1 TRANSFAC yes 32325797
chr1 154972647 154972652 SP1 TRANSFAC yes 118374503
chr1 154972648 154972653 SP1 TRANSFAC yes 32325798
chr1 154972648 154972653 SP1 TRANSFAC yes 118374504
chr1 154972648 154972654 SP1 TRANSFAC yes 32325799
chr1 154972648 154972654 SP1 TRANSFAC yes 118374505
chr1 154972649 154972657 SP1 TRANSFAC yes 32325800
chr1 154972649 154972657 WT1 TRANSFAC yes 32325801
chr1 154972649 154972657 SP1 TRANSFAC yes 118374506
chr1 154972649 154972657 WT1 TRANSFAC yes 118374507
chr1 154972651 154972658 SP1 TRANSFAC yes 32325802
chr1 154972651 154972658 SP1 TRANSFAC yes 118374508
chr1 154972653 154972658 SP1 TRANSFAC yes 32325803
chr1 154972653 154972658 SP1 TRANSFAC yes 118374509
chr1 154972661 154972672 EBF1 JASPAR yes 32325804
chr1 154972661 154972672 EBF1 JASPAR yes 118374510
chr1 154972661 154972674 TFAP2A JASPAR yes 32325805
chr1 154972661 154972674 TFAP2B JASPAR yes 32325806
chr1 154972661 154972674 TFAP2C JASPAR yes 32325807
chr1 154972661 154972674 TFAP2A JASPAR yes 118374511
chr1 154972661 154972674 TFAP2B JASPAR yes 118374512
chr1 154972661 154972674 TFAP2C JASPAR yes 118374513
chr1 154972662 154972677 TFAP2A JASPAR yes 32325808
chr1 154972662 154972677 TFAP2C JASPAR yes 32325809
chr1 154972662 154972677 TFAP2A JASPAR yes 118374514
chr1 154972662 154972677 TFAP2C JASPAR yes 118374515
chr1 154972663 154972674 EBF1 JASPAR yes 32325810
chr1 154972663 154972674 EBF1 JASPAR yes 118374516
chr1 154972664 154972673 TFAP2A JASPAR yes 32325811
chr1 154972664 154972673 TFAP2A JASPAR yes 118374517
chr1 154972668 154972673 SP1 TRANSFAC yes 32325812
chr1 154972668 154972673 SP1 TRANSFAC yes 118374518
chr1 154972671 154972686 ZIC3 JASPAR yes 32325813
chr1 154972671 154972686 ZIC4 JASPAR yes 32325814
chr1 154972671 154972686 ZIC3 JASPAR yes 118374519
chr1 154972671 154972686 ZIC4 JASPAR yes 118374520
chr1 154972672 154972686 ZIC1 JASPAR yes 32325815
chr1 154972672 154972686 ZIC1 JASPAR yes 118374521
chr1 154972678 154972694 ZNF143 JASPAR yes 32325816
chr1 154972678 154972694 ZNF143 JASPAR yes 118374522
chr1 154972687 154972697 SP1 JASPAR yes 32325817
chr1 154972687 154972697 SP1 JASPAR yes 118374523
chr1 154972689 154972695 MAZ TRANSFAC yes 32325818
chr1 154972689 154972695 MAZ TRANSFAC yes 118374524
chr1 154972693 154972700 SP1 TRANSFAC yes 32325819
chr1 154972693 154972700 SP1 TRANSFAC yes 118374525
chr1 154972693 154972703 SP1 JASPAR yes 32325820
chr1 154972693 154972703 SP1 JASPAR yes 118374526
chr1 154972694 154972702 SP1 TRANSFAC yes 32325821
chr1 154972694 154972702 SP1 TRANSFAC yes 118374527
chr1 154972694 154972703 SP1 TRANSFAC yes 32325822
chr1 154972694 154972703 SP1 TRANSFAC yes 118374528
chr1 154972694 154972704 SP1 JASPAR yes 32325823
chr1 154972694 154972704 SP1 JASPAR yes 118374529
chr1 154972695 154972700 SP1 TRANSFAC yes 32325824
chr1 154972695 154972700 SP1 TRANSFAC yes 118374530
chr1 154972696 154972701 SP1 TRANSFAC yes 32325825
chr1 154972696 154972701 SP1 TRANSFAC yes 118374531
chr1 154972696 154972702 SP1 TRANSFAC yes 32325826
chr1 154972696 154972702 SP1 TRANSFAC yes 118374532
chr1 154972701 154972705 H4TF2 TRANSFAC yes 32325827
chr1 154972701 154972705 H4TF2 TRANSFAC yes 118374533
chr1 154972703 154972709 MZF1 JASPAR yes 32325828
chr1 154972703 154972709 MZF1 JASPAR yes 118374534
chr1 154972709 154972720 NRL JASPAR yes 32325829
chr1 154972709 154972720 NRL JASPAR yes 118374535
chr1 154972739 154972759 RREB1 JASPAR yes 32325830
chr1 154972739 154972759 RREB1 JASPAR yes 118374536
chr1 154972746 154972766 RREB1 JASPAR yes 32325831
chr1 154972746 154972766 RREB1 JASPAR yes 118374537
chr1 154972750 154972762 INSM1 JASPAR yes 32325832
chr1 154972750 154972762 INSM1 JASPAR yes 118374538
chr1 154972760 154972775 NR2C2 JASPAR yes 32325833
chr1 154972760 154972775 NR2C2 JASPAR yes 118374539
chr1 154972776 154972785 NKX2-8 JASPAR yes 32325834
chr1 154972776 154972785 NKX2-8 JASPAR yes 118374540
chr1 154972782 154972795 NFKB1 JASPAR yes 32325835
chr1 154972782 154972795 NFKB1 JASPAR yes 118374541
chr1 154972783 154972794 NFKB1 JASPAR yes 32325836
chr1 154972783 154972794 NFKB1 JASPAR yes 118374542
chr1 154972799 154972804 H4TF1 TRANSFAC yes 32325837
chr1 154972799 154972804 H4TF1 TRANSFAC yes 118374543
chr1 154972805 154972811 JUN TRANSFAC yes 32325838
chr1 154972805 154972811 JUN TRANSFAC yes 118374544
chr1 154972822 154972826 YY1 TRANSFAC yes 32325839
chr1 154972822 154972826 YY1 TRANSFAC yes 118374545
chr1 154972831 154972852 IRF1 JASPAR yes 32325840
chr1 154972831 154972852 IRF1 JASPAR yes 118374546
chr1 154972833 154972854 IRF1 JASPAR yes 32325841
chr1 154972833 154972854 IRF1 JASPAR yes 118374547
chr1 154972851 154972857 MAZ TRANSFAC yes 32325842
chr1 154972851 154972857 MAZ TRANSFAC yes 118374548
chr1 154972853 154972865 GLI2 JASPAR yes 32325843
chr1 154972853 154972865 GLI2 JASPAR yes 118374549
chr1 154972854 154972866 ZBTB7A JASPAR yes 32325844
chr1 154972854 154972866 ZBTB7A JASPAR yes 118374550
chr1 154972856 154972861 SP1 TRANSFAC yes 32325845
chr1 154972856 154972861 SP1 TRANSFAC yes 118374551
chr1 154972876 154972879 MYB TRANSFAC yes 32325846
chr1 154972876 154972879 MYB TRANSFAC yes 118374552
chr1 154972903 154972913 SREBF1 JASPAR yes 32325847
chr1 154972903 154972913 SREBF2 JASPAR yes 32325848
chr1 154972903 154972913 SREBF1 JASPAR yes 118374553
chr1 154972903 154972913 SREBF2 JASPAR yes 118374554
SNP sites on vista3406[chr1:154972628-154972915]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3406[chr1:154972628-154972915]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154897210 154909467 - PMVK ENSG00000163344.5 154909467 0.58 1.0 1308 36839
chr1 154916552 154928599 - PBXIP1 ENSG00000163346.12 154928599 0.66 1.0 1309 55971
chr1 154929502 154936329 - PYGO2 ENSG00000163348.3 154936329 0.62 0.99 1310 63701
chr1 154934774 154946871 - SHC1 ENSG00000160691.14 154946871 0.76 1.0 1311 74243
chr1 154947129 154951725 + CKS1B ENSG00000173207.8 154947129 0.93 0.99 1312 74501
chr1 154955814 154965587 + FLAD1 ENSG00000160688.14 154955814 0.78 1.0 1313 83186
chr1 154966062 154966791 + LENEP ENSG00000163352.5 154966062 0.82 1.0 1314 93434
chr1 154975127 154990998 + ZBTB7B ENSG00000160685.9 154975127 0.68 1.0 1315 97788
chr1 154990996 155006257 - DCST2 ENSG00000163354.10 155006257 0.79 1.0 1316 66658
chr1 155006300 155023406 + DCST1 ENSG00000163357.6 155006300 0.78 1.0 1317 66615
chr1 155023042 155035252 + ADAM15 ENSG00000143537.9 155023042 0.65 1.0 1318 49873
chr1 155036207 155042029 + EFNA4 ENSG00000243364.3 155036207 0.64 0.99 1319 36708
chr1 155036224 155059283 + EFNA3 ENSG00000251246.1 155036224 1.0 0.88 1321 36691
chr1 155036224 155060014 + EFNA3 ENSG00000143590.9 155036224 0.86 1.0 1320 36691
Expression level of Genes
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miRNAs possibly regulated by vista3406[chr1:154972628-154972915]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results