EnhancerDB
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  3. vista34060[chr2:188404228-188404596]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34060[chr2:188404228-188404596]
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Tissue distribution of vista34060
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Transcription factor that possibly regulate vista34060[chr2:188404228-188404596]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 188404231 188404243 FOXI1 JASPAR yes 22177245
chr2 188404231 188404243 FOXI1 JASPAR yes 79517900
chr2 188404234 188404238 YY1 TRANSFAC yes 22177246
chr2 188404234 188404238 YY1 TRANSFAC yes 79517901
chr2 188404237 188404252 FOXP1 JASPAR yes 22177247
chr2 188404237 188404252 FOXP1 JASPAR yes 79517902
chr2 188404238 188404252 FOXF2 JASPAR yes 22177248
chr2 188404238 188404252 FOXF2 JASPAR yes 79517903
chr2 188404239 188404247 FOXD1 JASPAR yes 22177249
chr2 188404239 188404247 FOXG1 JASPAR yes 22177250
chr2 188404239 188404247 FOXO3 JASPAR yes 22177251
chr2 188404239 188404247 FOXD1 JASPAR yes 79517904
chr2 188404239 188404247 FOXG1 JASPAR yes 79517905
chr2 188404239 188404247 FOXO3 JASPAR yes 79517906
chr2 188404240 188404247 FOXD2 JASPAR yes 22177252
chr2 188404240 188404247 FOXI1 JASPAR yes 22177253
chr2 188404240 188404247 FOXL1 JASPAR yes 22177254
chr2 188404240 188404247 FOXO4 JASPAR yes 22177255
chr2 188404240 188404247 FOXO6 JASPAR yes 22177256
chr2 188404240 188404247 FOXP3 JASPAR yes 22177257
chr2 188404240 188404247 FOXD2 JASPAR yes 79517907
chr2 188404240 188404247 FOXI1 JASPAR yes 79517908
chr2 188404240 188404247 FOXL1 JASPAR yes 79517909
chr2 188404240 188404247 FOXO4 JASPAR yes 79517910
chr2 188404240 188404247 FOXO6 JASPAR yes 79517911
chr2 188404240 188404247 FOXP3 JASPAR yes 79517912
chr2 188404240 188404250 HOXD11 JASPAR yes 22177258
chr2 188404240 188404250 HOXD11 JASPAR yes 79517913
chr2 188404240 188404251 HOXC11 JASPAR yes 22177259
chr2 188404240 188404251 HOXC12 JASPAR yes 22177260
chr2 188404240 188404251 HOXC13 JASPAR yes 22177261
chr2 188404240 188404251 HOXD12 JASPAR yes 22177262
chr2 188404240 188404251 HOXC11 JASPAR yes 79517914
chr2 188404240 188404251 HOXC12 JASPAR yes 79517915
chr2 188404240 188404251 HOXC13 JASPAR yes 79517916
chr2 188404240 188404251 HOXD12 JASPAR yes 79517917
chr2 188404257 188404272 FOXP1 JASPAR yes 22177263
chr2 188404257 188404272 FOXP1 JASPAR yes 79517918
chr2 188404258 188404269 FOXA1 JASPAR yes 22177264
chr2 188404258 188404269 FOXA1 JASPAR yes 79517919
chr2 188404258 188404273 FOXA1 JASPAR yes 22177265
chr2 188404258 188404273 FOXA1 JASPAR yes 79517920
chr2 188404259 188404270 FOXB1 JASPAR yes 22177266
chr2 188404259 188404270 FOXC1 JASPAR yes 22177267
chr2 188404259 188404270 FOXB1 JASPAR yes 79517921
chr2 188404259 188404270 FOXC1 JASPAR yes 79517922
chr2 188404259 188404271 FOXC2 JASPAR yes 22177268
chr2 188404259 188404271 FOXC2 JASPAR yes 79517923
chr2 188404273 188404279 GATA3 JASPAR yes 22177269
chr2 188404273 188404279 GATA3 JASPAR yes 79517924
chr2 188404283 188404286 MYB TRANSFAC yes 22177270
chr2 188404283 188404286 MYB TRANSFAC yes 79517925
chr2 188404283 188404299 ZNF143 JASPAR yes 22177271
chr2 188404283 188404299 ZNF143 JASPAR yes 79517926
chr2 188404294 188404298 YY1 TRANSFAC yes 22177272
chr2 188404294 188404298 YY1 TRANSFAC yes 79517927
chr2 188404296 188404314 MAFF JASPAR yes 22177273
chr2 188404296 188404314 MAFF JASPAR yes 79517928
chr2 188404297 188404312 MAFK JASPAR yes 22177274
chr2 188404297 188404312 MAFK JASPAR yes 79517929
chr2 188404301 188404312 NRL JASPAR yes 22177275
chr2 188404301 188404312 NRL JASPAR yes 79517930
chr2 188404312 188404320 RHOXF1 JASPAR yes 22177276
chr2 188404312 188404320 RHOXF1 JASPAR yes 79517931
chr2 188404315 188404321 ZNF354C JASPAR yes 22177277
chr2 188404315 188404321 ZNF354C JASPAR yes 79517932
chr2 188404321 188404326 NFY TRANSFAC yes 22177278
chr2 188404321 188404326 NFY TRANSFAC yes 79517933
chr2 188404322 188404332 NFATC3 JASPAR yes 22177279
chr2 188404322 188404332 NFATC3 JASPAR yes 79517934
chr2 188404324 188404335 NFKB1 JASPAR yes 22177280
chr2 188404324 188404335 NFKB1 JASPAR yes 79517935
chr2 188404325 188404335 RELA JASPAR yes 22177281
chr2 188404325 188404335 REL JASPAR yes 22177282
chr2 188404325 188404335 RELA JASPAR yes 79517936
chr2 188404325 188404335 REL JASPAR yes 79517937
chr2 188404336 188404340 YY1 TRANSFAC yes 22177283
chr2 188404336 188404340 YY1 TRANSFAC yes 79517938
chr2 188404348 188404359 STAT3 JASPAR yes 22177284
chr2 188404348 188404359 STAT3 JASPAR yes 79517939
chr2 188404371 188404385 GATA2 JASPAR yes 22177285
chr2 188404371 188404385 GATA2 JASPAR yes 79517940
chr2 188404373 188404381 GATA3 JASPAR yes 22177286
chr2 188404373 188404381 GATA3 JASPAR yes 79517941
chr2 188404385 188404391 TCF4 TRANSFAC yes 22177287
chr2 188404385 188404391 TCF4 TRANSFAC yes 79517942
chr2 188404393 188404399 GATA3 JASPAR yes 22177288
chr2 188404393 188404399 GATA3 JASPAR yes 79517943
chr2 188404417 188404421 H4TF2 TRANSFAC yes 22177289
chr2 188404417 188404421 H4TF2 TRANSFAC yes 79517944
chr2 188404421 188404425 YY1 TRANSFAC yes 22177290
chr2 188404421 188404425 YY1 TRANSFAC yes 79517945
chr2 188404422 188404437 FOXP1 JASPAR yes 22177291
chr2 188404422 188404437 FOXP1 JASPAR yes 79517946
chr2 188404423 188404432 SRY JASPAR yes 22177292
chr2 188404423 188404432 SRY JASPAR yes 79517947
chr2 188404423 188404434 FOXP2 JASPAR yes 22177293
chr2 188404423 188404434 FOXP2 JASPAR yes 79517948
chr2 188404425 188404433 FOXO3 JASPAR yes 22177294
chr2 188404425 188404433 FOXO3 JASPAR yes 79517949
chr2 188404476 188404482 HiNF-A TRANSFAC yes 22177295
chr2 188404476 188404482 HiNF-A TRANSFAC yes 79517950
chr2 188404479 188404500 ZNF263 JASPAR yes 22177296
chr2 188404479 188404500 ZNF263 JASPAR yes 79517951
chr2 188404482 188404503 ZNF263 JASPAR yes 22177297
chr2 188404482 188404503 ZNF263 JASPAR yes 79517952
chr2 188404491 188404498 CEBPA TRANSFAC yes 22177298
chr2 188404491 188404498 CEBPA TRANSFAC yes 79517953
chr2 188404499 188404508 SRY JASPAR yes 22177299
chr2 188404499 188404508 SRY JASPAR yes 79517954
chr2 188404527 188404532 GATA2 JASPAR yes 22177300
chr2 188404527 188404532 GATA2 JASPAR yes 79517955
chr2 188404537 188404548 FOXA1 JASPAR yes 22177301
chr2 188404537 188404548 FOXH1 JASPAR yes 22177302
chr2 188404537 188404548 FOXA1 JASPAR yes 79517956
chr2 188404537 188404548 FOXH1 JASPAR yes 79517957
chr2 188404537 188404552 FOXA1 JASPAR yes 22177303
chr2 188404537 188404552 FOXA1 JASPAR yes 79517958
chr2 188404538 188404549 FOXB1 JASPAR yes 22177304
chr2 188404538 188404549 FOXC1 JASPAR yes 22177305
chr2 188404538 188404549 FOXB1 JASPAR yes 79517959
chr2 188404538 188404549 FOXC1 JASPAR yes 79517960
chr2 188404538 188404550 FOXC2 JASPAR yes 22177306
chr2 188404538 188404550 FOXC2 JASPAR yes 79517961
chr2 188404541 188404549 FOXG1 JASPAR yes 22177307
chr2 188404541 188404549 FOXG1 JASPAR yes 79517962
chr2 188404542 188404554 GRHL1 JASPAR yes 22177308
chr2 188404542 188404554 GRHL1 JASPAR yes 79517963
chr2 188404560 188404581 MAFG JASPAR yes 22177309
chr2 188404560 188404581 MAFG JASPAR yes 79517964
chr2 188404583 188404595 TGIF1 JASPAR yes 22177310
chr2 188404583 188404595 TGIF1 JASPAR yes 79517965
chr2 188404592 188404595 MYB TRANSFAC yes 22177311
chr2 188404592 188404595 MYB TRANSFAC yes 79517966
SNP sites on vista34060[chr2:188404228-188404596]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 188404283 rs13427829 G A
MYB ZNF143
6245229
chr2 188404292 rs570244100 G A
ZNF143
6245230
chr2 188404423 rs538905070 A G
FOXP1 FOXP2 SRY YY1
6245231
chr2 188404579 rs368882303 A G
MAFG
6245232
Genes possibly regulated by vista34060[chr2:188404228-188404596]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 188207856 188313187 - CALCRL ENSG00000064989.8 188313187 0.96 1.0 2983 8959
chr2 188328957 188430487 - TFPI ENSG00000003436.10 188430487 0.87 0.94 2984 74109
Expression level of Genes
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miRNAs possibly regulated by vista34060[chr2:188404228-188404596]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results