EnhancerDB
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  3. vista3409[chr1:154977099-154977253]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3409[chr1:154977099-154977253]
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Tissue distribution of vista3409
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Transcription factor that possibly regulate vista3409[chr1:154977099-154977253]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154977088 154977100 BHLHE23 JASPAR yes 32326687
chr1 154977088 154977100 BHLHE23 JASPAR yes 118374716
chr1 154977089 154977099 BHLHE22 JASPAR yes 32326688
chr1 154977089 154977099 NEUROG2 JASPAR yes 32326689
chr1 154977089 154977099 OLIG1 JASPAR yes 32326690
chr1 154977089 154977099 OLIG2 JASPAR yes 32326691
chr1 154977089 154977099 OLIG3 JASPAR yes 32326692
chr1 154977089 154977099 BHLHE22 JASPAR yes 118374717
chr1 154977089 154977099 NEUROG2 JASPAR yes 118374718
chr1 154977089 154977099 OLIG1 JASPAR yes 118374719
chr1 154977089 154977099 OLIG2 JASPAR yes 118374720
chr1 154977089 154977099 OLIG3 JASPAR yes 118374721
chr1 154977093 154977106 EOMES JASPAR yes 32326693
chr1 154977093 154977106 EOMES JASPAR yes 118374722
chr1 154977139 154977142 MYB TRANSFAC yes 32326694
chr1 154977139 154977142 MYB TRANSFAC yes 118374723
chr1 154977143 154977148 TFAP2A TRANSFAC yes 32326695
chr1 154977143 154977148 TFAP2A TRANSFAC yes 118374724
chr1 154977143 154977149 MZF1 JASPAR yes 32326696
chr1 154977143 154977149 MZF1 JASPAR yes 118374725
chr1 154977152 154977164 INSM1 JASPAR yes 32326697
chr1 154977152 154977164 INSM1 JASPAR yes 118374726
chr1 154977156 154977169 NFKB1 JASPAR yes 32326698
chr1 154977156 154977169 NFKB2 JASPAR yes 32326699
chr1 154977156 154977169 NFKB1 JASPAR yes 118374727
chr1 154977156 154977169 NFKB2 JASPAR yes 118374728
chr1 154977157 154977168 NFKB1 JASPAR yes 32326700
chr1 154977157 154977168 NFKB1 JASPAR yes 118374729
chr1 154977157 154977170 NFKB1 JASPAR yes 32326701
chr1 154977157 154977170 NFKB2 JASPAR yes 32326702
chr1 154977157 154977170 NFKB1 JASPAR yes 118374730
chr1 154977157 154977170 NFKB2 JASPAR yes 118374731
chr1 154977158 154977168 NFKB1 JASPAR yes 32326703
chr1 154977158 154977168 NFKB1 JASPAR yes 118374732
chr1 154977158 154977169 NFKB1 JASPAR yes 32326704
chr1 154977158 154977169 NFKB1 JASPAR yes 118374733
chr1 154977165 154977176 EBF1 JASPAR yes 32326705
chr1 154977165 154977176 EBF1 JASPAR yes 118374734
chr1 154977171 154977183 NHLH1 JASPAR yes 32326706
chr1 154977171 154977183 NHLH1 JASPAR yes 118374735
chr1 154977172 154977182 NHLH1 JASPAR yes 32326707
chr1 154977172 154977182 TFAP4 JASPAR yes 32326708
chr1 154977172 154977182 NHLH1 JASPAR yes 118374736
chr1 154977172 154977182 TFAP4 JASPAR yes 118374737
chr1 154977175 154977188 ATF4 JASPAR yes 32326709
chr1 154977175 154977188 ATF4 JASPAR yes 118374738
chr1 154977199 154977203 NFE TRANSFAC yes 32326710
chr1 154977199 154977203 NFE TRANSFAC yes 118374739
chr1 154977207 154977228 REST JASPAR yes 32326711
chr1 154977207 154977228 REST JASPAR yes 118374740
chr1 154977211 154977215 NFE TRANSFAC yes 32326712
chr1 154977211 154977215 NFE TRANSFAC yes 118374741
chr1 154977213 154977228 RFX5 JASPAR yes 32326713
chr1 154977213 154977228 RFX5 JASPAR yes 118374742
chr1 154977216 154977231 TFAP2A JASPAR yes 32326714
chr1 154977216 154977231 TFAP2C JASPAR yes 32326715
chr1 154977216 154977231 TFAP2A JASPAR yes 118374743
chr1 154977216 154977231 TFAP2C JASPAR yes 118374744
chr1 154977218 154977233 TFAP2A JASPAR yes 32326716
chr1 154977218 154977233 TFAP2A JASPAR yes 118374745
chr1 154977219 154977230 EBF1 JASPAR yes 32326717
chr1 154977219 154977230 EBF1 JASPAR yes 118374746
chr1 154977220 154977229 TFAP2A JASPAR yes 32326718
chr1 154977220 154977229 TFAP2A JASPAR yes 118374747
SNP sites on vista3409[chr1:154977099-154977253]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154977107 rs371715356 G A no 642383
chr1 154977113 rs113012729 A G no 642384
Genes possibly regulated by vista3409[chr1:154977099-154977253]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154897210 154909467 - PMVK ENSG00000163344.5 154909467 0.58 1.0 1308 32368
chr1 154916552 154928599 - PBXIP1 ENSG00000163346.12 154928599 0.66 1.0 1309 51500
chr1 154929502 154936329 - PYGO2 ENSG00000163348.3 154936329 0.62 0.99 1310 59230
chr1 154934774 154946871 - SHC1 ENSG00000160691.14 154946871 0.76 1.0 1311 69772
chr1 154947129 154951725 + CKS1B ENSG00000173207.8 154947129 0.93 0.99 1312 70030
chr1 154955814 154965587 + FLAD1 ENSG00000160688.14 154955814 0.78 1.0 1313 78715
chr1 154966062 154966791 + LENEP ENSG00000163352.5 154966062 0.82 1.0 1314 88963
chr1 154975127 154990998 + ZBTB7B ENSG00000160685.9 154975127 0.68 1.0 1315 98028
chr1 154990996 155006257 - DCST2 ENSG00000163354.10 155006257 0.79 1.0 1316 70996
chr1 155006300 155023406 + DCST1 ENSG00000163357.6 155006300 0.78 1.0 1317 70953
chr1 155023042 155035252 + ADAM15 ENSG00000143537.9 155023042 0.65 1.0 1318 54211
chr1 155036207 155042029 + EFNA4 ENSG00000243364.3 155036207 0.64 0.99 1319 41046
chr1 155036224 155059283 + EFNA3 ENSG00000251246.1 155036224 1.0 0.88 1321 41029
chr1 155036224 155060014 + EFNA3 ENSG00000143590.9 155036224 0.86 1.0 1320 41029
Expression level of Genes
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miRNAs possibly regulated by vista3409[chr1:154977099-154977253]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results