EnhancerDB
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  3. vista3413[chr1:154997722-154998120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3413[chr1:154997722-154998120]
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Tissue distribution of vista3413
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Transcription factor that possibly regulate vista3413[chr1:154997722-154998120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154997727 154997733 GATA3 JASPAR yes 118374964
chr1 154997752 154997767 HNF1A JASPAR yes 118374965
chr1 154997753 154997766 HNF1B JASPAR yes 118374966
chr1 154997754 154997764 PAX3 JASPAR yes 118374967
chr1 154997754 154997764 PAX7 JASPAR yes 118374968
chr1 154997757 154997773 POU4F2 JASPAR yes 118374969
chr1 154997757 154997773 POU4F3 JASPAR yes 118374970
chr1 154997763 154997778 HNF1A JASPAR yes 118374971
chr1 154997764 154997777 HNF1B JASPAR yes 118374972
chr1 154997765 154997776 BATF JASPAR yes 118374973
chr1 154997769 154997775 JUN TRANSFAC yes 118374974
chr1 154997784 154997804 RREB1 JASPAR yes 118374975
chr1 154997789 154997809 RREB1 JASPAR yes 118374976
chr1 154997791 154997806 FOXA1 JASPAR yes 118374977
chr1 154997792 154997798 TCF4 TRANSFAC yes 118374978
chr1 154997792 154997804 FOXI1 JASPAR yes 118374979
chr1 154997792 154997807 FOXP1 JASPAR yes 118374980
chr1 154997793 154997805 FOXC2 JASPAR yes 118374981
chr1 154997794 154997814 RREB1 JASPAR yes 118374982
chr1 154997795 154997806 FOXA1 JASPAR yes 118374983
chr1 154997795 154997816 IRF1 JASPAR yes 118374984
chr1 154997796 154997811 FOXP1 JASPAR yes 118374985
chr1 154997799 154997811 IRF1 JASPAR yes 118374986
chr1 154997799 154997819 RREB1 JASPAR yes 118374987
chr1 154997800 154997821 IRF1 JASPAR yes 118374988
chr1 154997801 154997807 TCF4 TRANSFAC yes 118374989
chr1 154997801 154997816 FOXP1 JASPAR yes 118374990
chr1 154997804 154997816 IRF1 JASPAR yes 118374991
chr1 154997804 154997824 RREB1 JASPAR yes 118374992
chr1 154997806 154997812 TCF4 TRANSFAC yes 118374993
chr1 154997806 154997821 FOXP1 JASPAR yes 118374994
chr1 154997807 154997822 STAT2 JASPAR yes 118374995
chr1 154997809 154997821 IRF1 JASPAR yes 118374996
chr1 154997811 154997817 TCF4 TRANSFAC yes 118374997
chr1 154997811 154997826 FOXP1 JASPAR yes 118374998
chr1 154997812 154997823 FOXP2 JASPAR yes 118374999
chr1 154997839 154997843 NFE TRANSFAC yes 118375000
chr1 154997839 154997846 GATA1 TRANSFAC yes 118375001
chr1 154997858 154997863 MYC TRANSFAC yes 118375002
chr1 154997859 154997870 CEBPA JASPAR yes 118375003
chr1 154997859 154997870 CEBPB JASPAR yes 118375004
chr1 154997860 154997870 CEBPB JASPAR yes 118375005
chr1 154997860 154997870 CEBPD JASPAR yes 118375006
chr1 154997860 154997870 CEBPE JASPAR yes 118375007
chr1 154997860 154997870 CEBPG JASPAR yes 118375008
chr1 154997860 154997871 CEBPA JASPAR yes 118375009
chr1 154997860 154997871 CEBPB JASPAR yes 118375010
chr1 154997872 154997889 ESR1 JASPAR yes 118375011
chr1 154997889 154997902 ELF3 JASPAR yes 118375012
chr1 154997890 154997900 GABPA JASPAR yes 118375013
chr1 154997890 154997901 ELF5 JASPAR yes 118375014
chr1 154997890 154997902 EHF JASPAR yes 118375015
chr1 154997890 154997902 ELF4 JASPAR yes 118375016
chr1 154997892 154997898 ETS1 JASPAR yes 118375017
chr1 154997892 154997898 SPI1 JASPAR yes 118375018
chr1 154997892 154997902 ELK1 JASPAR yes 118375019
chr1 154997945 154997957 HES5 JASPAR yes 118375020
chr1 154997945 154997957 HES7 JASPAR yes 118375021
chr1 154997946 154997956 BHLHE40 JASPAR yes 118375022
chr1 154997946 154997956 BHLHE41 JASPAR yes 118375023
chr1 154997946 154997956 HEY1 JASPAR yes 118375024
chr1 154997946 154997956 HEY2 JASPAR yes 118375025
chr1 154997946 154997956 MAX JASPAR yes 118375026
chr1 154997946 154997956 MNT JASPAR yes 118375027
chr1 154997946 154997956 TFE3 JASPAR yes 118375028
chr1 154997946 154997956 TFEB JASPAR yes 118375029
chr1 154997948 154997953 MYC TRANSFAC yes 118375030
chr1 154997948 154997953 USF1 TRANSFAC yes 118375031
chr1 154997948 154997953 USF2 TRANSFAC yes 118375032
chr1 154997956 154997966 SP1 JASPAR yes 118375033
chr1 154997956 154997975 PAX5 JASPAR yes 118375034
chr1 154997959 154997964 SP1 TRANSFAC yes 118375035
chr1 154997973 154997988 MEF2A JASPAR yes 118375036
chr1 154997974 154997989 MEF2C JASPAR yes 118375037
chr1 154997975 154997987 MEF2A JASPAR yes 118375038
chr1 154997975 154997987 MEF2B JASPAR yes 118375039
chr1 154997975 154997987 MEF2D JASPAR yes 118375040
chr1 154997977 154997981 YY1 TRANSFAC yes 118375041
chr1 154997995 154998006 CEBPB JASPAR yes 118375042
chr1 154997998 154998010 YY1 JASPAR yes 118375043
chr1 154998020 154998038 RARA JASPAR yes 118375044
chr1 154998027 154998040 NR2F1 JASPAR yes 118375045
chr1 154998029 154998040 ESRRA JASPAR yes 118375046
chr1 154998029 154998040 ESRRB JASPAR yes 118375047
chr1 154998030 154998038 NR4A2 JASPAR yes 118375048
chr1 154998031 154998041 RORA JASPAR yes 118375049
chr1 154998046 154998060 PLAG1 JASPAR yes 118375050
chr1 154998081 154998092 NFE2 JASPAR yes 118375051
chr1 154998082 154998093 FOSL2 JASPAR yes 118375052
chr1 154998094 154998104 SP1 JASPAR yes 118375053
chr1 154998095 154998103 SP1 TRANSFAC yes 118375054
SNP sites on vista3413[chr1:154997722-154998120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154997779 rs546582459 C T no 642526
chr1 154997780 rs139069757 G A no 642527
chr1 154997850 rs143026343 G A no 642528
chr1 154997873 rs557344328 C T
ESR1
642529
chr1 154997951 rs9427168 C T
BHLHE40 BHLHE41 HES5 HES7 HEY1 HEY2 MAX MNT MYC TFE3 TFEB USF1 USF2
642530
chr1 154998034 rs185147775 A C
ESRRA ESRRB NR2F1 NR4A2 RARA RORA
642531
Genes possibly regulated by vista3413[chr1:154997722-154998120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154897210 154909467 - PMVK ENSG00000163344.5 154909467 0.58 1.0 1308 11745
chr1 154916552 154928599 - PBXIP1 ENSG00000163346.12 154928599 0.66 1.0 1309 30877
chr1 154929502 154936329 - PYGO2 ENSG00000163348.3 154936329 0.62 0.99 1310 38607
chr1 154934774 154946871 - SHC1 ENSG00000160691.14 154946871 0.76 1.0 1311 49149
chr1 154947129 154951725 + CKS1B ENSG00000173207.8 154947129 0.93 0.99 1312 49407
chr1 154955814 154965587 + FLAD1 ENSG00000160688.14 154955814 0.78 1.0 1313 58092
chr1 154966062 154966791 + LENEP ENSG00000163352.5 154966062 0.82 1.0 1314 68340
chr1 154975127 154990998 + ZBTB7B ENSG00000160685.9 154975127 0.68 1.0 1315 77405
chr1 154990996 155006257 - DCST2 ENSG00000163354.10 155006257 0.79 1.0 1316 91863
chr1 155006300 155023406 + DCST1 ENSG00000163357.6 155006300 0.78 1.0 1317 91820
chr1 155023042 155035252 + ADAM15 ENSG00000143537.9 155023042 0.65 1.0 1318 75078
chr1 155036207 155042029 + EFNA4 ENSG00000243364.3 155036207 0.64 0.99 1319 61913
chr1 155036224 155059283 + EFNA3 ENSG00000251246.1 155036224 1.0 0.88 1321 61896
chr1 155036224 155060014 + EFNA3 ENSG00000143590.9 155036224 0.86 1.0 1320 61896
Expression level of Genes
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miRNAs possibly regulated by vista3413[chr1:154997722-154998120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results