EnhancerDB
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  3. vista34328[chr2:200270966-200271332]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34328[chr2:200270966-200271332]
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Tissue distribution of vista34328
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Transcription factor that possibly regulate vista34328[chr2:200270966-200271332]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 200270967 200270981 GATA2 JASPAR yes 22190094
chr2 200270967 200270981 GATA2 JASPAR yes 80054875
chr2 200270969 200270977 GATA3 JASPAR yes 22190095
chr2 200270969 200270977 GATA3 JASPAR yes 80054876
chr2 200270990 200271002 HNF1B JASPAR yes 22190096
chr2 200270990 200271002 MEF2A JASPAR yes 22190097
chr2 200270990 200271002 HNF1B JASPAR yes 80054877
chr2 200270990 200271002 MEF2A JASPAR yes 80054878
chr2 200270992 200270996 TEAD2 TRANSFAC yes 22190098
chr2 200270992 200270996 TEAD2 TRANSFAC yes 80054879
chr2 200270992 200271002 ALX3 JASPAR yes 22190099
chr2 200270992 200271002 HOXB2 JASPAR yes 22190100
chr2 200270992 200271002 MNX1 JASPAR yes 22190101
chr2 200270992 200271002 ALX3 JASPAR yes 80054880
chr2 200270992 200271002 HOXB2 JASPAR yes 80054881
chr2 200270992 200271002 MNX1 JASPAR yes 80054882
chr2 200270993 200271001 LMX1A JASPAR yes 22190102
chr2 200270993 200271001 LMX1B JASPAR yes 22190103
chr2 200270993 200271001 NKX6-1 JASPAR yes 22190104
chr2 200270993 200271001 NKX6-2 JASPAR yes 22190105
chr2 200270993 200271001 VAX1 JASPAR yes 22190106
chr2 200270993 200271001 VAX2 JASPAR yes 22190107
chr2 200270993 200271001 VSX1 JASPAR yes 22190108
chr2 200270993 200271001 VSX2 JASPAR yes 22190109
chr2 200270993 200271001 LMX1A JASPAR yes 80054883
chr2 200270993 200271001 LMX1B JASPAR yes 80054884
chr2 200270993 200271001 NKX6-1 JASPAR yes 80054885
chr2 200270993 200271001 NKX6-2 JASPAR yes 80054886
chr2 200270993 200271001 VAX1 JASPAR yes 80054887
chr2 200270993 200271001 VAX2 JASPAR yes 80054888
chr2 200270993 200271001 VSX1 JASPAR yes 80054889
chr2 200270993 200271001 VSX2 JASPAR yes 80054890
chr2 200270998 200271001 MYB TRANSFAC yes 22190110
chr2 200270998 200271001 MYB TRANSFAC yes 80054891
chr2 200271000 200271008 TBX5 JASPAR yes 22190111
chr2 200271000 200271008 TBX5 JASPAR yes 80054892
chr2 200271016 200271030 IRF7 JASPAR yes 22190112
chr2 200271016 200271030 IRF7 JASPAR yes 80054893
chr2 200271027 200271037 NFATC3 JASPAR yes 22190113
chr2 200271027 200271037 NFATC3 JASPAR yes 80054894
chr2 200271029 200271037 FOXO3 JASPAR yes 22190114
chr2 200271029 200271037 FOXO3 JASPAR yes 80054895
chr2 200271056 200271060 TEAD2 TRANSFAC yes 22190115
chr2 200271056 200271060 TEAD2 TRANSFAC yes 80054896
chr2 200271061 200271067 TCF4 TRANSFAC yes 22190116
chr2 200271061 200271067 TCF4 TRANSFAC yes 80054897
chr2 200271064 200271072 FOXO3 JASPAR yes 22190117
chr2 200271064 200271072 FOXO3 JASPAR yes 80054898
chr2 200271074 200271086 IRF1 JASPAR yes 22190118
chr2 200271074 200271086 IRF1 JASPAR yes 80054899
chr2 200271079 200271083 YY1 TRANSFAC yes 22190119
chr2 200271079 200271083 YY1 TRANSFAC yes 80054900
chr2 200271112 200271124 POU2F1 JASPAR yes 22190120
chr2 200271112 200271124 POU2F1 JASPAR yes 80054901
chr2 200271112 200271125 POU3F3 JASPAR yes 22190121
chr2 200271112 200271125 POU3F3 JASPAR yes 80054902
chr2 200271112 200271126 POU1F1 JASPAR yes 22190122
chr2 200271112 200271126 POU1F1 JASPAR yes 80054903
chr2 200271113 200271125 POU3F1 JASPAR yes 22190123
chr2 200271113 200271125 POU3F2 JASPAR yes 22190124
chr2 200271113 200271125 POU3F1 JASPAR yes 80054904
chr2 200271113 200271125 POU3F2 JASPAR yes 80054905
chr2 200271114 200271123 POU3F4 JASPAR yes 22190125
chr2 200271114 200271123 POU5F1B JASPAR yes 22190126
chr2 200271114 200271123 POU3F4 JASPAR yes 80054906
chr2 200271114 200271123 POU5F1B JASPAR yes 80054907
chr2 200271114 200271125 FOXB1 JASPAR yes 22190127
chr2 200271114 200271125 FOXB1 JASPAR yes 80054908
chr2 200271119 200271137 IRF2 JASPAR yes 22190128
chr2 200271119 200271137 IRF2 JASPAR yes 80054909
chr2 200271120 200271141 IRF1 JASPAR yes 22190129
chr2 200271120 200271141 IRF1 JASPAR yes 80054910
chr2 200271122 200271137 STAT2 JASPAR yes 22190130
chr2 200271122 200271137 STAT2 JASPAR yes 80054911
chr2 200271124 200271136 IRF1 JASPAR yes 22190131
chr2 200271124 200271136 IRF1 JASPAR yes 80054912
chr2 200271124 200271138 IRF8 JASPAR yes 22190132
chr2 200271124 200271138 IRF8 JASPAR yes 80054913
chr2 200271124 200271139 IRF9 JASPAR yes 22190133
chr2 200271124 200271139 IRF9 JASPAR yes 80054914
chr2 200271129 200271133 YY1 TRANSFAC yes 22190134
chr2 200271129 200271133 YY1 TRANSFAC yes 80054915
chr2 200271131 200271141 HOXD11 JASPAR yes 22190135
chr2 200271131 200271141 HOXD11 JASPAR yes 80054916
chr2 200271144 200271152 GATA3 JASPAR yes 22190136
chr2 200271144 200271152 GATA3 JASPAR yes 80054917
chr2 200271147 200271162 RUNX2 JASPAR yes 22190137
chr2 200271147 200271162 RUNX2 JASPAR yes 80054918
chr2 200271148 200271157 RUNX2 JASPAR yes 22190138
chr2 200271148 200271157 RUNX2 JASPAR yes 80054919
chr2 200271148 200271158 RUNX3 JASPAR yes 22190139
chr2 200271148 200271158 RUNX3 JASPAR yes 80054920
chr2 200271148 200271159 RUNX1 JASPAR yes 22190140
chr2 200271148 200271159 RUNX1 JASPAR yes 80054921
chr2 200271154 200271172 RARA JASPAR yes 22190141
chr2 200271154 200271172 RARA JASPAR yes 80054922
chr2 200271166 200271169 MYB TRANSFAC yes 22190142
chr2 200271166 200271169 MYB TRANSFAC yes 80054923
chr2 200271169 200271175 SOX10 JASPAR yes 22190143
chr2 200271169 200271175 SOX10 JASPAR yes 80054924
chr2 200271188 200271206 MAFF JASPAR yes 22190144
chr2 200271188 200271206 MAFF JASPAR yes 80054925
chr2 200271189 200271204 MAFK JASPAR yes 22190145
chr2 200271189 200271204 MAFK JASPAR yes 80054926
chr2 200271191 200271204 POU3F3 JASPAR yes 22190146
chr2 200271191 200271204 POU3F3 JASPAR yes 80054927
chr2 200271193 200271204 NRL JASPAR yes 22190147
chr2 200271193 200271204 NRL JASPAR yes 80054928
chr2 200271198 200271202 YY1 TRANSFAC yes 22190148
chr2 200271198 200271202 YY1 TRANSFAC yes 80054929
chr2 200271199 200271209 NFATC3 JASPAR yes 22190149
chr2 200271199 200271209 NFATC3 JASPAR yes 80054930
chr2 200271200 200271207 NFATC2 JASPAR yes 22190150
chr2 200271200 200271207 NFATC2 JASPAR yes 80054931
chr2 200271208 200271213 GATA2 JASPAR yes 22190151
chr2 200271208 200271213 GATA2 JASPAR yes 80054932
chr2 200271215 200271219 NFE TRANSFAC yes 22190152
chr2 200271215 200271219 NFE TRANSFAC yes 80054933
chr2 200271216 200271221 GATA2 JASPAR yes 22190153
chr2 200271216 200271221 GATA2 JASPAR yes 80054934
chr2 200271222 200271232 NFATC3 JASPAR yes 22190154
chr2 200271222 200271232 NFATC3 JASPAR yes 80054935
chr2 200271224 200271231 NFATC2 JASPAR yes 22190155
chr2 200271224 200271231 NFATC2 JASPAR yes 80054936
chr2 200271228 200271240 GRHL1 JASPAR yes 22190156
chr2 200271228 200271240 GRHL1 JASPAR yes 80054937
chr2 200271265 200271271 NFE2 TRANSFAC yes 22190157
chr2 200271265 200271271 NFE2 TRANSFAC yes 80054938
chr2 200271266 200271276 GCM2 JASPAR yes 22190158
chr2 200271266 200271276 GCM2 JASPAR yes 80054939
chr2 200271310 200271321 PHOX2A JASPAR yes 22190159
chr2 200271310 200271321 PROP1 JASPAR yes 22190160
chr2 200271310 200271321 PHOX2A JASPAR yes 80054940
chr2 200271310 200271321 PROP1 JASPAR yes 80054941
chr2 200271313 200271317 TEAD2 TRANSFAC yes 22190161
chr2 200271313 200271317 TEAD2 TRANSFAC yes 80054942
chr2 200271324 200271328 YY1 TRANSFAC yes 22190162
chr2 200271324 200271328 YY1 TRANSFAC yes 80054943
SNP sites on vista34328[chr2:200270966-200271332]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 200271006 rs549299867 C A
TBX5
6286780
chr2 200271208 rs190242135 C T
GATA2 NFATC3
6286781
chr2 200271311 rs140507103 T A
PHOX2A PROP1
6286782
Genes possibly regulated by vista34328[chr2:200270966-200271332]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 200134223 200335989 - SATB2 ENSG00000119042.12 200335989 0.87 0.99 3031 35343
Expression level of Genes
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miRNAs possibly regulated by vista34328[chr2:200270966-200271332]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results