EnhancerDB
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  3. vista34343[chr2:200850363-200850607]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34343[chr2:200850363-200850607]
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Tissue distribution of vista34343
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Transcription factor that possibly regulate vista34343[chr2:200850363-200850607]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 200850344 200850722 CTCF UCSC Txn Factor no Conserved 108434850
chr2 200850354 200850790 ELF1 UCSC Txn Factor no Conserved 108434851
chr2 200850387 200850766 GABPA UCSC Txn Factor no Conserved 108434852
chr2 200850408 200850697 RAD21 UCSC Txn Factor no Conserved 108434853
chr2 200850360 200850363 MYB TRANSFAC yes 22190761
chr2 200850360 200850363 MYB TRANSFAC yes 80074512
chr2 200850405 200850408 MYB TRANSFAC yes 22190762
chr2 200850405 200850408 MYB TRANSFAC yes 80074513
chr2 200850410 200850424 BATF3 JASPAR yes 22190763
chr2 200850410 200850424 BATF3 JASPAR yes 80074514
chr2 200850420 200850426 ZNF354C JASPAR yes 22190764
chr2 200850420 200850426 ZNF354C JASPAR yes 80074515
chr2 200850452 200850462 ALX3 JASPAR yes 22190765
chr2 200850452 200850462 EN2 JASPAR yes 22190766
chr2 200850452 200850462 ESX1 JASPAR yes 22190767
chr2 200850452 200850462 GBX2 JASPAR yes 22190768
chr2 200850452 200850462 GSX1 JASPAR yes 22190769
chr2 200850452 200850462 GSX2 JASPAR yes 22190770
chr2 200850452 200850462 LBX2 JASPAR yes 22190771
chr2 200850452 200850462 LHX2 JASPAR yes 22190772
chr2 200850452 200850462 ALX3 JASPAR yes 80074516
chr2 200850452 200850462 EN2 JASPAR yes 80074517
chr2 200850452 200850462 ESX1 JASPAR yes 80074518
chr2 200850452 200850462 GBX2 JASPAR yes 80074519
chr2 200850452 200850462 GSX1 JASPAR yes 80074520
chr2 200850452 200850462 GSX2 JASPAR yes 80074521
chr2 200850452 200850462 LBX2 JASPAR yes 80074522
chr2 200850452 200850462 LHX2 JASPAR yes 80074523
chr2 200850453 200850461 BARX1 JASPAR yes 22190773
chr2 200850453 200850461 BSX JASPAR yes 22190774
chr2 200850453 200850461 DLX6 JASPAR yes 22190775
chr2 200850453 200850461 ISX JASPAR yes 22190776
chr2 200850453 200850461 LBX1 JASPAR yes 22190777
chr2 200850453 200850461 LHX9 JASPAR yes 22190778
chr2 200850453 200850461 MSX1 JASPAR yes 22190779
chr2 200850453 200850461 MSX2 JASPAR yes 22190780
chr2 200850453 200850461 NKX6-2 JASPAR yes 22190781
chr2 200850453 200850461 PRRX1 JASPAR yes 22190782
chr2 200850453 200850461 RAX2 JASPAR yes 22190783
chr2 200850453 200850461 SHOX JASPAR yes 22190784
chr2 200850453 200850461 UNCX JASPAR yes 22190785
chr2 200850453 200850461 BARX1 JASPAR yes 80074524
chr2 200850453 200850461 BSX JASPAR yes 80074525
chr2 200850453 200850461 DLX6 JASPAR yes 80074526
chr2 200850453 200850461 ISX JASPAR yes 80074527
chr2 200850453 200850461 LBX1 JASPAR yes 80074528
chr2 200850453 200850461 LHX9 JASPAR yes 80074529
chr2 200850453 200850461 MSX1 JASPAR yes 80074530
chr2 200850453 200850461 MSX2 JASPAR yes 80074531
chr2 200850453 200850461 NKX6-2 JASPAR yes 80074532
chr2 200850453 200850461 PRRX1 JASPAR yes 80074533
chr2 200850453 200850461 RAX2 JASPAR yes 80074534
chr2 200850453 200850461 SHOX JASPAR yes 80074535
chr2 200850453 200850461 UNCX JASPAR yes 80074536
chr2 200850466 200850476 CUX1 JASPAR yes 22190786
chr2 200850466 200850476 CUX2 JASPAR yes 22190787
chr2 200850466 200850476 CUX1 JASPAR yes 80074537
chr2 200850466 200850476 CUX2 JASPAR yes 80074538
chr2 200850479 200850499 TP53 JASPAR yes 22190788
chr2 200850479 200850499 TP53 JASPAR yes 80074539
chr2 200850485 200850499 EBF1 JASPAR yes 22190789
chr2 200850485 200850499 EBF1 JASPAR yes 80074540
chr2 200850502 200850507 ETS2 TRANSFAC yes 22190790
chr2 200850502 200850507 ETS2 TRANSFAC yes 80074541
chr2 200850515 200850519 YY1 TRANSFAC yes 22190791
chr2 200850515 200850519 YY1 TRANSFAC yes 80074542
chr2 200850521 200850540 CTCF JASPAR yes 22190792
chr2 200850521 200850540 CTCF JASPAR yes 80074543
chr2 200850525 200850529 YY1 TRANSFAC yes 22190793
chr2 200850525 200850529 YY1 TRANSFAC yes 80074544
chr2 200850530 200850542 E2F1 JASPAR yes 22190794
chr2 200850530 200850542 E2F1 JASPAR yes 80074545
chr2 200850531 200850542 E2F1 JASPAR yes 22190795
chr2 200850531 200850542 E2F1 JASPAR yes 80074546
chr2 200850532 200850546 PLAG1 JASPAR yes 22190796
chr2 200850532 200850546 PLAG1 JASPAR yes 80074547
chr2 200850554 200850575 ZNF263 JASPAR yes 22190797
chr2 200850554 200850575 ZNF263 JASPAR yes 80074548
chr2 200850556 200850577 IRF1 JASPAR yes 22190798
chr2 200850556 200850577 IRF1 JASPAR yes 80074549
chr2 200850559 200850564 ETS2 TRANSFAC yes 22190799
chr2 200850559 200850564 ETS2 TRANSFAC yes 80074550
chr2 200850560 200850574 STAT1 JASPAR yes 22190800
chr2 200850560 200850574 STAT1 JASPAR yes 80074551
chr2 200850560 200850575 PRDM1 JASPAR yes 22190801
chr2 200850560 200850575 STAT2 JASPAR yes 22190802
chr2 200850560 200850575 PRDM1 JASPAR yes 80074552
chr2 200850560 200850575 STAT2 JASPAR yes 80074553
chr2 200850560 200850578 NR3C1 JASPAR yes 22190803
chr2 200850560 200850578 NR3C1 JASPAR yes 80074554
chr2 200850571 200850581 TFCP2 JASPAR yes 22190804
chr2 200850571 200850581 TFCP2 JASPAR yes 80074555
chr2 200850575 200850580 MYC TRANSFAC yes 22190805
chr2 200850575 200850580 MYC TRANSFAC yes 80074556
chr2 200850576 200850597 IRF1 JASPAR yes 22190806
chr2 200850576 200850597 IRF1 JASPAR yes 80074557
chr2 200850578 200850589 FLI1 JASPAR yes 22190807
chr2 200850578 200850589 FLI1 JASPAR yes 80074558
chr2 200850578 200850593 AR JASPAR yes 22190808
chr2 200850578 200850593 STAT2 JASPAR yes 22190809
chr2 200850578 200850593 AR JASPAR yes 80074559
chr2 200850578 200850593 STAT2 JASPAR yes 80074560
chr2 200850579 200850589 ERF JASPAR yes 22190810
chr2 200850579 200850589 ETS1 JASPAR yes 22190811
chr2 200850579 200850589 ERF JASPAR yes 80074561
chr2 200850579 200850589 ETS1 JASPAR yes 80074562
chr2 200850579 200850590 ELF5 JASPAR yes 22190812
chr2 200850579 200850590 ETV2 JASPAR yes 22190813
chr2 200850579 200850590 ELF5 JASPAR yes 80074563
chr2 200850579 200850590 ETV2 JASPAR yes 80074564
chr2 200850579 200850592 ELF1 JASPAR yes 22190814
chr2 200850579 200850592 ELF1 JASPAR yes 80074565
chr2 200850579 200850593 SPIC JASPAR yes 22190815
chr2 200850579 200850593 SPIC JASPAR yes 80074566
chr2 200850596 200850607 NFKB1 JASPAR yes 22190816
chr2 200850596 200850607 NFKB1 JASPAR yes 80074567
SNP sites on vista34343[chr2:200850363-200850607]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 200850378 rs281792 C T
CTCF ELF1
6288343
chr2 200850402 rs281791 G A
CTCF ELF1 GABPA
6288344
chr2 200850492 rs143296750 G A
CTCF EBF1 ELF1 GABPA RAD21 TP53
6288345
Genes possibly regulated by vista34343[chr2:200850363-200850607]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 200775979 200820658 + C2orf69 ENSG00000178074.5 200775979 0.57 0.99 3033 25616
chr2 200794698 200820459 - TYW5 ENSG00000162971.6 200820459 0.71 0.99 3034 70096
chr2 200820040 200873263 + C2orf47 ENSG00000162972.6 200820040 0.72 0.99 3035 69677
Expression level of Genes
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miRNAs possibly regulated by vista34343[chr2:200850363-200850607]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results