EnhancerDB
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  3. vista34365[chr2:201829288-201829721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34365[chr2:201829288-201829721]
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Tissue distribution of vista34365
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Transcription factor that possibly regulate vista34365[chr2:201829288-201829721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 201829294 201829299 ETS2 TRANSFAC yes 22191713
chr2 201829339 201829348 SRY JASPAR yes 22191714
chr2 201829346 201829350 YY1 TRANSFAC yes 22191715
chr2 201829359 201829380 IRF1 JASPAR yes 22191716
chr2 201829362 201829376 IRF7 JASPAR yes 22191717
chr2 201829364 201829376 IRF1 JASPAR yes 22191718
chr2 201829400 201829407 NKX3-1 JASPAR yes 22191719
chr2 201829408 201829412 YY1 TRANSFAC yes 22191720
chr2 201829455 201829465 MAX JASPAR yes 22191721
chr2 201829456 201829466 BHLHE40 JASPAR yes 22191722
chr2 201829456 201829466 BHLHE41 JASPAR yes 22191723
chr2 201829456 201829466 MAX JASPAR yes 22191724
chr2 201829456 201829466 MLXIPL JASPAR yes 22191725
chr2 201829456 201829466 MLX JASPAR yes 22191726
chr2 201829456 201829466 MNT JASPAR yes 22191727
chr2 201829456 201829466 TFE3 JASPAR yes 22191728
chr2 201829458 201829463 MYC TRANSFAC yes 22191729
chr2 201829458 201829463 USF1 TRANSFAC yes 22191730
chr2 201829458 201829463 USF2 TRANSFAC yes 22191731
chr2 201829469 201829474 MYB TRANSFAC yes 22191732
chr2 201829505 201829510 ETS2 TRANSFAC yes 22191733
chr2 201829518 201829528 MAX JASPAR yes 22191734
chr2 201829535 201829545 POU6F2 JASPAR yes 22191735
chr2 201829536 201829546 ALX3 JASPAR yes 22191736
chr2 201829536 201829546 EMX1 JASPAR yes 22191737
chr2 201829536 201829546 EMX2 JASPAR yes 22191738
chr2 201829536 201829546 ESX1 JASPAR yes 22191739
chr2 201829536 201829546 GBX2 JASPAR yes 22191740
chr2 201829536 201829546 GSX1 JASPAR yes 22191741
chr2 201829536 201829546 GSX2 JASPAR yes 22191742
chr2 201829536 201829546 HESX1 JASPAR yes 22191743
chr2 201829536 201829546 HOXB2 JASPAR yes 22191744
chr2 201829536 201829546 HOXB3 JASPAR yes 22191745
chr2 201829536 201829546 LBX2 JASPAR yes 22191746
chr2 201829536 201829546 LHX2 JASPAR yes 22191747
chr2 201829536 201829546 LHX6 JASPAR yes 22191748
chr2 201829536 201829546 MEOX1 JASPAR yes 22191749
chr2 201829536 201829546 MEOX2 JASPAR yes 22191750
chr2 201829536 201829546 MIXL1 JASPAR yes 22191751
chr2 201829536 201829546 MNX1 JASPAR yes 22191752
chr2 201829536 201829546 NOTO JASPAR yes 22191753
chr2 201829536 201829546 RAX JASPAR yes 22191754
chr2 201829536 201829547 HOXA10 JASPAR yes 22191755
chr2 201829537 201829545 BSX JASPAR yes 22191756
chr2 201829537 201829545 DLX6 JASPAR yes 22191757
chr2 201829537 201829545 EN1 JASPAR yes 22191758
chr2 201829537 201829545 ISX JASPAR yes 22191759
chr2 201829537 201829545 LBX1 JASPAR yes 22191760
chr2 201829537 201829545 LHX9 JASPAR yes 22191761
chr2 201829537 201829545 LMX1A JASPAR yes 22191762
chr2 201829537 201829545 LMX1B JASPAR yes 22191763
chr2 201829537 201829545 NKX6-1 JASPAR yes 22191764
chr2 201829537 201829545 NKX6-2 JASPAR yes 22191765
chr2 201829537 201829545 PAX4 JASPAR yes 22191766
chr2 201829537 201829545 PDX1 JASPAR yes 22191767
chr2 201829537 201829545 PRRX1 JASPAR yes 22191768
chr2 201829537 201829545 RAX2 JASPAR yes 22191769
chr2 201829537 201829545 SHOX JASPAR yes 22191770
chr2 201829537 201829545 UNCX JASPAR yes 22191771
chr2 201829537 201829545 VAX1 JASPAR yes 22191772
chr2 201829537 201829545 VAX2 JASPAR yes 22191773
chr2 201829537 201829545 VSX1 JASPAR yes 22191774
chr2 201829537 201829545 VSX2 JASPAR yes 22191775
chr2 201829537 201829547 HOXB13 JASPAR yes 22191776
chr2 201829537 201829547 HOXD13 JASPAR yes 22191777
chr2 201829576 201829582 PEA3 TRANSFAC yes 22191778
chr2 201829586 201829607 IRF1 JASPAR yes 22191779
chr2 201829588 201829603 IRF9 JASPAR yes 22191780
chr2 201829589 201829603 IRF7 JASPAR yes 22191781
chr2 201829589 201829603 IRF8 JASPAR yes 22191782
chr2 201829625 201829639 PLAG1 JASPAR yes 22191783
chr2 201829643 201829653 NFATC3 JASPAR yes 22191784
chr2 201829644 201829651 NFATC2 JASPAR yes 22191785
chr2 201829658 201829662 H4TF2 TRANSFAC yes 22191786
chr2 201829665 201829680 MYBL2 JASPAR yes 22191787
chr2 201829672 201829675 MYB TRANSFAC yes 22191788
chr2 201829672 201829684 NHLH1 JASPAR yes 22191789
chr2 201829672 201829685 ZBTB18 JASPAR yes 22191790
chr2 201829673 201829683 FIGLA JASPAR yes 22191791
chr2 201829673 201829683 MSC JASPAR yes 22191792
chr2 201829673 201829683 MYF6 JASPAR yes 22191793
chr2 201829673 201829683 NHLH1 JASPAR yes 22191794
chr2 201829673 201829683 TFAP4 JASPAR yes 22191795
chr2 201829688 201829694 NFIC JASPAR yes 22191796
chr2 201829702 201829717 RFX5 JASPAR yes 22191797
SNP sites on vista34365[chr2:201829288-201829721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 201829411 rs140760675 T A,C
YY1
6292922
chr2 201829522 rs537895366 C T
MAX
6292923
chr2 201829536 rs16836377 A C
ALX3 EMX1 EMX2 ESX1 GBX2 GSX1 GSX2 HESX1 HOXA10 HOXB2 HOXB3 LBX2 LHX2 LHX6 MEOX1 MEOX2 MIXL1 MNX1 NOTO POU6F2 RAX
6292924
chr2 201829551 rs575635316 CAGA C no 6292925
chr2 201829602 rs874358 C G
IRF1 IRF7 IRF8 IRF9
6292926
Genes possibly regulated by vista34365[chr2:201829288-201829721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 201717732 201729422 - CLK1 ENSG00000013441.11 201729422 0.67 0.99 3041 134
chr2 201735630 201754026 - PPIL3 ENSG00000240344.4 201754026 0.76 1.0 3042 24738
chr2 201754050 201768655 + NIF3L1 ENSG00000196290.10 201754050 0.61 0.99 3043 24762
chr2 201773696 201828403 - ORC2 ENSG00000115942.4 201828403 0.66 0.99 3044 99115
Expression level of Genes
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miRNAs possibly regulated by vista34365[chr2:201829288-201829721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results