EnhancerDB
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  3. vista3439[chr1:155946363-155946660]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3439[chr1:155946363-155946660]
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Tissue distribution of vista3439
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Transcription factor that possibly regulate vista3439[chr1:155946363-155946660]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 155946328 155950254 POLR2A UCSC Txn Factor no Conserved 107835739
chr1 155946351 155946368 ZNF410 JASPAR yes 32370401
chr1 155946351 155946368 ZNF410 JASPAR yes 118376293
chr1 155946364 155946374 NFATC3 JASPAR yes 32370403
chr1 155946364 155946374 NFATC3 JASPAR yes 118376294
chr1 155946366 155946373 NFATC2 JASPAR yes 32370404
chr1 155946366 155946373 NFATC2 JASPAR yes 118376295
chr1 155946390 155946396 NFE2 TRANSFAC yes 32370405
chr1 155946390 155946396 NFE2 TRANSFAC yes 118376296
chr1 155946393 155946413 RREB1 JASPAR yes 32370406
chr1 155946393 155946413 RREB1 JASPAR yes 118376297
chr1 155946414 155946426 INSM1 JASPAR yes 32370407
chr1 155946414 155946426 INSM1 JASPAR yes 118376298
chr1 155946430 155946451 ZNF263 JASPAR yes 32370408
chr1 155946430 155946451 ZNF263 JASPAR yes 118376299
chr1 155946431 155946443 INSM1 JASPAR yes 32370409
chr1 155946431 155946443 INSM1 JASPAR yes 118376300
chr1 155946433 155946453 RREB1 JASPAR yes 32370410
chr1 155946433 155946453 RREB1 JASPAR yes 118376301
chr1 155946449 155946467 IRF2 JASPAR yes 32370411
chr1 155946449 155946467 IRF2 JASPAR yes 118376302
chr1 155946450 155946471 IRF1 JASPAR yes 32370412
chr1 155946450 155946471 IRF1 JASPAR yes 118376303
chr1 155946452 155946467 PRDM1 JASPAR yes 32370413
chr1 155946452 155946467 STAT2 JASPAR yes 32370414
chr1 155946452 155946467 PRDM1 JASPAR yes 118376304
chr1 155946452 155946467 STAT2 JASPAR yes 118376305
chr1 155946456 155946474 SRF JASPAR yes 32370415
chr1 155946456 155946474 SRF JASPAR yes 118376306
chr1 155946457 155946462 ETS2 TRANSFAC yes 32370416
chr1 155946457 155946462 ETS2 TRANSFAC yes 118376307
chr1 155946481 155946492 RUNX1 JASPAR yes 32370417
chr1 155946481 155946492 RUNX1 JASPAR yes 118376308
chr1 155946482 155946492 RUNX3 JASPAR yes 32370418
chr1 155946482 155946492 RUNX3 JASPAR yes 118376309
chr1 155946483 155946492 RUNX2 JASPAR yes 32370419
chr1 155946483 155946492 RUNX2 JASPAR yes 118376310
chr1 155946500 155946511 E2F4 JASPAR yes 32370420
chr1 155946500 155946511 E2F4 JASPAR yes 118376311
chr1 155946502 155946511 SP1 TRANSFAC yes 32370421
chr1 155946502 155946511 SP1 TRANSFAC yes 118376312
chr1 155946503 155946509 SP1 TRANSFAC yes 32370422
chr1 155946503 155946509 SP1 TRANSFAC yes 118376313
chr1 155946503 155946513 SP1 JASPAR yes 32370423
chr1 155946503 155946513 SP1 JASPAR yes 118376314
chr1 155946504 155946511 SP1 TRANSFAC yes 32370424
chr1 155946504 155946511 SP1 TRANSFAC yes 118376315
chr1 155946505 155946510 SP1 TRANSFAC yes 32370425
chr1 155946505 155946510 SP1 TRANSFAC yes 118376316
chr1 155946505 155946511 SP1 TRANSFAC yes 32370426
chr1 155946505 155946511 SP1 TRANSFAC yes 118376317
chr1 155946505 155946512 SP1 TRANSFAC yes 32370427
chr1 155946505 155946512 SP1 TRANSFAC yes 118376318
chr1 155946549 155946563 FOXF2 JASPAR yes 32370428
chr1 155946549 155946563 FOXF2 JASPAR yes 118376319
chr1 155946549 155946564 FOXP1 JASPAR yes 32370429
chr1 155946549 155946564 FOXP1 JASPAR yes 118376320
chr1 155946550 155946561 FOXA1 JASPAR yes 32370430
chr1 155946550 155946561 FOXA1 JASPAR yes 118376321
chr1 155946550 155946565 FOXA1 JASPAR yes 32370431
chr1 155946550 155946565 FOXA1 JASPAR yes 118376322
chr1 155946551 155946563 FOXC2 JASPAR yes 32370432
chr1 155946551 155946563 FOXC2 JASPAR yes 118376323
chr1 155946552 155946563 FOXP2 JASPAR yes 32370433
chr1 155946552 155946563 FOXP2 JASPAR yes 118376324
chr1 155946552 155946564 FOXI1 JASPAR yes 32370434
chr1 155946552 155946564 FOXI1 JASPAR yes 118376325
chr1 155946574 155946579 SP1 TRANSFAC yes 32370435
chr1 155946574 155946579 SP1 TRANSFAC yes 118376326
chr1 155946586 155946597 NRF1 JASPAR yes 32370436
chr1 155946586 155946597 NRF1 JASPAR yes 118376327
chr1 155946605 155946609 NFE TRANSFAC yes 32370437
chr1 155946605 155946609 NFE TRANSFAC yes 118376328
chr1 155946605 155946618 SMAD2 JASPAR yes 32370438
chr1 155946605 155946618 SMAD2 JASPAR yes 118376329
chr1 155946611 155946625 ZIC1 JASPAR yes 32370439
chr1 155946611 155946625 ZIC1 JASPAR yes 118376330
chr1 155946611 155946626 ZIC3 JASPAR yes 32370440
chr1 155946611 155946626 ZIC4 JASPAR yes 32370441
chr1 155946611 155946626 ZIC3 JASPAR yes 118376331
chr1 155946611 155946626 ZIC4 JASPAR yes 118376332
chr1 155946655 155946670 FOXP1 JASPAR yes 32370442
chr1 155946655 155946670 FOXP1 JASPAR yes 118376333
SNP sites on vista3439[chr1:155946363-155946660]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 155946399 rs7534858 A C
POLR2A RREB1
646388
chr1 155946513 rs559942704 C G
POLR2A SP1
646389
Genes possibly regulated by vista3439[chr1:155946363-155946660]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 155867599 155881195 - RIT1 ENSG00000143622.6 155881195 0.72 0.97 1345 34832
chr1 155882834 155904191 - KIAA0907 ENSG00000132680.6 155904191 0.61 0.99 1346 57828
chr1 155911480 155912625 + RXFP4 ENSG00000173080.4 155911480 0.96 0.99 1347 65117
chr1 155916630 155976861 - ARHGEF2 ENSG00000116584.13 155976861 0.83 1.0 1348 69799
chr1 155978839 155990750 - SSR2 ENSG00000163479.9 155990750 0.65 0.99 1349 55910
chr1 156005092 156023585 - UBQLN4 ENSG00000160803.7 156023585 0.61 1.0 1350 23075
chr1 156024543 156028301 + LAMTOR2 ENSG00000116586.7 156024543 0.73 0.99 1351 22117
chr1 156030951 156040295 + RAB25 ENSG00000132698.9 156030951 0.84 1.0 1352 15709
Expression level of Genes
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miRNAs possibly regulated by vista3439[chr1:155946363-155946660]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 155921064 155921087 - hsa-miR-6738-3p MIMAT0027378 155948332 0.11172161172161173 0.916667 0.0 86
Expression level of miRNAs
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