EnhancerDB
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  3. vista34420[chr2:204315265-204315638]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34420[chr2:204315265-204315638]
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Tissue distribution of vista34420
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Transcription factor that possibly regulate vista34420[chr2:204315265-204315638]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 204315260 204315270 NFKB1 JASPAR yes 22194398
chr2 204315260 204315270 NFKB1 JASPAR yes 80233348
chr2 204315264 204315279 JUND JASPAR yes 22194399
chr2 204315264 204315279 JUND JASPAR yes 80233349
chr2 204315265 204315278 JUN JASPAR yes 22194400
chr2 204315265 204315278 JUN JASPAR yes 80233350
chr2 204315266 204315273 JUN TRANSFAC yes 22194401
chr2 204315266 204315273 JUN TRANSFAC yes 80233351
chr2 204315290 204315297 NKX3-1 JASPAR yes 22194402
chr2 204315290 204315297 NKX3-1 JASPAR yes 80233352
chr2 204315305 204315309 YY1 TRANSFAC yes 22194403
chr2 204315305 204315309 YY1 TRANSFAC yes 80233353
chr2 204315310 204315320 ID4 JASPAR yes 22194404
chr2 204315310 204315320 TCF3 JASPAR yes 22194405
chr2 204315310 204315320 TCF4 JASPAR yes 22194406
chr2 204315310 204315320 ID4 JASPAR yes 80233354
chr2 204315310 204315320 TCF3 JASPAR yes 80233355
chr2 204315310 204315320 TCF4 JASPAR yes 80233356
chr2 204315336 204315351 FOXP1 JASPAR yes 22194407
chr2 204315336 204315351 FOXP1 JASPAR yes 80233357
chr2 204315341 204315353 IRF1 JASPAR yes 22194408
chr2 204315341 204315353 IRF1 JASPAR yes 80233358
chr2 204315368 204315376 GATA3 JASPAR yes 22194409
chr2 204315368 204315376 GATA3 JASPAR yes 80233359
chr2 204315370 204315384 RORA JASPAR yes 22194410
chr2 204315370 204315384 RORA JASPAR yes 80233360
chr2 204315401 204315416 RFX5 JASPAR yes 22194411
chr2 204315401 204315416 RFX5 JASPAR yes 80233361
chr2 204315447 204315462 TFAP2C JASPAR yes 22194412
chr2 204315447 204315462 TFAP2C JASPAR yes 80233362
chr2 204315449 204315462 TFAP2A JASPAR yes 22194413
chr2 204315449 204315462 TFAP2B JASPAR yes 22194414
chr2 204315449 204315462 TFAP2C JASPAR yes 22194415
chr2 204315449 204315462 TFAP2A JASPAR yes 80233363
chr2 204315449 204315462 TFAP2B JASPAR yes 80233364
chr2 204315449 204315462 TFAP2C JASPAR yes 80233365
chr2 204315454 204315469 HNF4G JASPAR yes 22194416
chr2 204315454 204315469 NR2C2 JASPAR yes 22194417
chr2 204315454 204315469 HNF4G JASPAR yes 80233366
chr2 204315454 204315469 NR2C2 JASPAR yes 80233367
chr2 204315455 204315469 NR2F1 JASPAR yes 22194418
chr2 204315455 204315469 RXRB JASPAR yes 22194419
chr2 204315455 204315469 RXRG JASPAR yes 22194420
chr2 204315455 204315469 NR2F1 JASPAR yes 80233368
chr2 204315455 204315469 RXRB JASPAR yes 80233369
chr2 204315455 204315469 RXRG JASPAR yes 80233370
chr2 204315455 204315470 HNF4A JASPAR yes 22194421
chr2 204315455 204315470 HNF4A JASPAR yes 80233371
chr2 204315457 204315461 LFA1 TRANSFAC yes 22194422
chr2 204315457 204315461 LFA1 TRANSFAC yes 80233372
chr2 204315491 204315497 YY1 JASPAR yes 22194423
chr2 204315491 204315497 YY1 JASPAR yes 80233373
chr2 204315502 204315513 DMRT3 JASPAR yes 22194424
chr2 204315502 204315513 DMRT3 JASPAR yes 80233374
chr2 204315510 204315520 SP1 JASPAR yes 22194425
chr2 204315510 204315520 SP1 JASPAR yes 80233375
chr2 204315513 204315518 SP1 TRANSFAC yes 22194426
chr2 204315513 204315518 SP1 TRANSFAC yes 80233376
chr2 204315614 204315635 IRF1 JASPAR yes 22194427
chr2 204315614 204315635 IRF1 JASPAR yes 80233377
chr2 204315616 204315631 STAT2 JASPAR yes 22194428
chr2 204315616 204315631 STAT2 JASPAR yes 80233378
chr2 204315619 204315634 FOXP1 JASPAR yes 22194429
chr2 204315619 204315634 FOXP1 JASPAR yes 80233379
chr2 204315620 204315635 FOXP1 JASPAR yes 22194430
chr2 204315620 204315635 FOXP1 JASPAR yes 80233380
chr2 204315621 204315636 FOXP1 JASPAR yes 22194431
chr2 204315621 204315636 FOXP1 JASPAR yes 80233381
chr2 204315622 204315637 FOXP1 JASPAR yes 22194432
chr2 204315622 204315637 FOXP1 JASPAR yes 80233382
chr2 204315623 204315638 FOXP1 JASPAR yes 22194433
chr2 204315623 204315638 FOXP1 JASPAR yes 80233383
SNP sites on vista34420[chr2:204315265-204315638]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 204315394 rs11679740 G A no 6300651
chr2 204315441 rs536529774 T C,G no 6300652
chr2 204315618 rs72926436 G T
IRF1 STAT2
6300653
Genes possibly regulated by vista34420[chr2:204315265-204315638]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 204259068 204400133 - RAPH1 ENSG00000173166.13 204400133 0.84 1.0 3071 15505
Expression level of Genes
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miRNAs possibly regulated by vista34420[chr2:204315265-204315638]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results