EnhancerDB
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  3. vista3460[chr1:156462474-156462813]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3460[chr1:156462474-156462813]
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Tissue distribution of vista3460
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Transcription factor that possibly regulate vista3460[chr1:156462474-156462813]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 156461203 156463519 POLR2A UCSC Txn Factor no Conserved 107836377
chr1 156461203 156463519 POLR2A UCSC Txn Factor no Conserved 107836378
chr1 156462417 156462733 EBF1 UCSC Txn Factor no Conserved 107836435
chr1 156462473 156462477 NFE TRANSFAC yes 32391374
chr1 156462473 156462477 NFE TRANSFAC yes 118377304
chr1 156462498 156462503 SP1 TRANSFAC yes 32391375
chr1 156462498 156462503 SP1 TRANSFAC yes 118377305
chr1 156462501 156462508 SP1 TRANSFAC yes 32391376
chr1 156462501 156462508 SP1 TRANSFAC yes 118377306
chr1 156462503 156462508 SP1 TRANSFAC yes 32391377
chr1 156462503 156462508 SP1 TRANSFAC yes 118377307
chr1 156462526 156462540 RXRB JASPAR yes 32391378
chr1 156462526 156462540 RXRG JASPAR yes 32391379
chr1 156462526 156462540 RXRB JASPAR yes 118377308
chr1 156462526 156462540 RXRG JASPAR yes 118377309
chr1 156462526 156462541 NR2C2 JASPAR yes 32391380
chr1 156462526 156462541 NR2C2 JASPAR yes 118377310
chr1 156462538 156462544 MZF1 JASPAR yes 32391381
chr1 156462538 156462544 MZF1 JASPAR yes 118377311
chr1 156462539 156462559 RREB1 JASPAR yes 32391382
chr1 156462539 156462559 RREB1 JASPAR yes 118377312
chr1 156462563 156462574 EBF1 JASPAR yes 32391383
chr1 156462563 156462574 EBF1 JASPAR yes 118377313
chr1 156462569 156462590 IRF1 JASPAR yes 32391384
chr1 156462569 156462590 IRF1 JASPAR yes 118377314
chr1 156462573 156462587 STAT1 JASPAR yes 32391385
chr1 156462573 156462587 STAT1 JASPAR yes 118377315
chr1 156462573 156462588 PRDM1 JASPAR yes 32391386
chr1 156462573 156462588 STAT2 JASPAR yes 32391387
chr1 156462573 156462588 PRDM1 JASPAR yes 118377316
chr1 156462573 156462588 STAT2 JASPAR yes 118377317
chr1 156462573 156462591 IRF2 JASPAR yes 32391388
chr1 156462573 156462591 IRF2 JASPAR yes 118377318
chr1 156462574 156462586 IRF1 JASPAR yes 32391389
chr1 156462574 156462586 IRF1 JASPAR yes 118377319
chr1 156462585 156462597 NHLH1 JASPAR yes 32391390
chr1 156462585 156462597 NHLH1 JASPAR yes 118377320
chr1 156462586 156462596 NHLH1 JASPAR yes 32391391
chr1 156462586 156462596 NHLH1 JASPAR yes 118377321
chr1 156462593 156462598 SP1 TRANSFAC yes 32391392
chr1 156462593 156462598 SP1 TRANSFAC yes 118377322
chr1 156462593 156462607 PLAG1 JASPAR yes 32391393
chr1 156462593 156462607 PLAG1 JASPAR yes 118377323
chr1 156462595 156462608 TFAP2A JASPAR yes 32391394
chr1 156462595 156462608 TFAP2B JASPAR yes 32391395
chr1 156462595 156462608 TFAP2C JASPAR yes 32391396
chr1 156462595 156462608 TFAP2A JASPAR yes 118377324
chr1 156462595 156462608 TFAP2B JASPAR yes 118377325
chr1 156462595 156462608 TFAP2C JASPAR yes 118377326
chr1 156462601 156462608 SP1 TRANSFAC yes 32391397
chr1 156462601 156462608 SP1 TRANSFAC yes 118377327
chr1 156462603 156462608 SP1 TRANSFAC yes 32391398
chr1 156462603 156462608 SP1 TRANSFAC yes 118377328
chr1 156462604 156462609 SP1 TRANSFAC yes 32391399
chr1 156462604 156462609 SP1 TRANSFAC yes 118377329
chr1 156462608 156462612 ESR1 TRANSFAC yes 32391400
chr1 156462608 156462612 ESR1 TRANSFAC yes 118377330
chr1 156462628 156462640 POU3F1 JASPAR yes 32391401
chr1 156462628 156462640 POU3F2 JASPAR yes 32391402
chr1 156462628 156462640 POU3F1 JASPAR yes 118377331
chr1 156462628 156462640 POU3F2 JASPAR yes 118377332
chr1 156462628 156462641 POU3F3 JASPAR yes 32391403
chr1 156462628 156462641 POU3F3 JASPAR yes 118377333
chr1 156462630 156462639 POU3F4 JASPAR yes 32391404
chr1 156462630 156462639 POU3F4 JASPAR yes 118377334
chr1 156462653 156462673 ESR1 JASPAR yes 32391405
chr1 156462653 156462673 ESR1 JASPAR yes 118377335
chr1 156462658 156462672 TLX1 JASPAR yes 32391406
chr1 156462658 156462672 TLX1 JASPAR yes 118377336
chr1 156462672 156462687 ZIC3 JASPAR yes 32391407
chr1 156462672 156462687 ZIC4 JASPAR yes 32391408
chr1 156462672 156462687 ZIC3 JASPAR yes 118377337
chr1 156462672 156462687 ZIC4 JASPAR yes 118377338
chr1 156462673 156462687 ZIC1 JASPAR yes 32391409
chr1 156462673 156462687 ZIC1 JASPAR yes 118377339
chr1 156462680 156462685 SP1 TRANSFAC yes 32391410
chr1 156462680 156462685 SP1 TRANSFAC yes 118377340
chr1 156462686 156462695 VENTX JASPAR yes 32391411
chr1 156462686 156462695 VENTX JASPAR yes 118377341
chr1 156462702 156462708 MAZ TRANSFAC yes 32391412
chr1 156462702 156462708 MAZ TRANSFAC yes 118377342
chr1 156462705 156462716 NFKB1 JASPAR yes 32391413
chr1 156462705 156462716 NFKB1 JASPAR yes 118377343
chr1 156462706 156462716 NFKB1 JASPAR yes 32391414
chr1 156462706 156462716 RELA JASPAR yes 32391415
chr1 156462706 156462716 NFKB1 JASPAR yes 118377344
chr1 156462706 156462716 RELA JASPAR yes 118377345
chr1 156462706 156462717 NFKB1 JASPAR yes 32391416
chr1 156462706 156462717 NFKB1 JASPAR yes 118377346
chr1 156462710 156462724 EBF1 JASPAR yes 32391417
chr1 156462710 156462724 EBF1 JASPAR yes 118377347
chr1 156462710 156462729 RFX2 JASPAR yes 32391418
chr1 156462710 156462729 RFX2 JASPAR yes 118377348
chr1 156462715 156462725 NFATC3 JASPAR yes 32391419
chr1 156462715 156462725 NFATC3 JASPAR yes 118377349
chr1 156462727 156462739 INSM1 JASPAR yes 32391420
chr1 156462727 156462739 INSM1 JASPAR yes 118377350
chr1 156462734 156462744 HOXA2 JASPAR yes 32391421
chr1 156462734 156462744 MEOX1 JASPAR yes 32391422
chr1 156462734 156462744 HOXA2 JASPAR yes 118377351
chr1 156462734 156462744 MEOX1 JASPAR yes 118377352
chr1 156462735 156462745 POU6F2 JASPAR yes 32391423
chr1 156462735 156462745 POU6F2 JASPAR yes 118377353
chr1 156462743 156462755 GLI2 JASPAR yes 32391424
chr1 156462743 156462755 GLI2 JASPAR yes 118377354
chr1 156462748 156462762 TLX1 JASPAR yes 32391425
chr1 156462748 156462762 TLX1 JASPAR yes 118377355
chr1 156462749 156462763 TLX1 JASPAR yes 32391426
chr1 156462749 156462763 TLX1 JASPAR yes 118377356
chr1 156462761 156462771 GABPA JASPAR yes 32391427
chr1 156462761 156462771 GABPA JASPAR yes 118377357
chr1 156462761 156462782 ZNF263 JASPAR yes 32391428
chr1 156462761 156462782 ZNF263 JASPAR yes 118377358
chr1 156462762 156462767 ETS2 TRANSFAC yes 32391429
chr1 156462762 156462767 ETS2 TRANSFAC yes 118377359
chr1 156462767 156462788 ZNF263 JASPAR yes 32391430
chr1 156462767 156462788 ZNF263 JASPAR yes 118377360
chr1 156462779 156462793 GATA2 JASPAR yes 32391431
chr1 156462779 156462793 GATA2 JASPAR yes 118377361
chr1 156462781 156462789 GATA3 JASPAR yes 32391432
chr1 156462781 156462789 GATA3 JASPAR yes 118377362
SNP sites on vista3460[chr1:156462474-156462813]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 156462507 rs114924298 C T
EBF1 POLR2A SP1
648838
chr1 156462535 rs181479986 C T
EBF1 NR2C2 POLR2A RXRB RXRG
648839
chr1 156462646 rs145891496 C T
EBF1 POLR2A
648840
chr1 156462680 rs181062903 G A
EBF1 POLR2A SP1 ZIC1 ZIC3 ZIC4
648841
chr1 156462697 rs374899255 G A
EBF1 POLR2A
648842
chr1 156462741 rs190672157 G A
HOXA2 MEOX1 POLR2A POU6F2
648843
Genes possibly regulated by vista3460[chr1:156462474-156462813]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 156374042 156400493 - C1orf61 ENSG00000125462.12 156400493 0.83 1.0 1368 38019
chr1 156433519 156470620 - MEF2D ENSG00000116604.13 156470620 0.7 1.0 1369 92193
chr1 156495197 156542396 - IQGAP3 ENSG00000183856.6 156542396 0.79 1.0 1370 20417
chr1 156549519 156556562 + TTC24 ENSG00000187862.7 156549519 0.99 0.95 1371 13294
chr1 156561554 156564091 + APOA1BP ENSG00000163382.7 156561554 0.56 1.0 1372 1259
Expression level of Genes
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miRNAs possibly regulated by vista3460[chr1:156462474-156462813]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results