EnhancerDB
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  3. vista34625[chr2:216223263-216223304]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34625[chr2:216223263-216223304]
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Tissue distribution of vista34625
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Transcription factor that possibly regulate vista34625[chr2:216223263-216223304]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 216223257 216223263 SOX10 JASPAR yes 22203800
chr2 216223257 216223263 SOX10 JASPAR yes 80767538
chr2 216223270 216223274 YY1 TRANSFAC yes 22203801
chr2 216223270 216223274 YY1 TRANSFAC yes 80767539
chr2 216223275 216223280 NFY TRANSFAC yes 22203802
chr2 216223275 216223280 NFY TRANSFAC yes 80767540
chr2 216223288 216223297 SOX9 JASPAR yes 22203803
chr2 216223288 216223297 SOX9 JASPAR yes 80767541
chr2 216223294 216223304 RELA JASPAR yes 22203804
chr2 216223294 216223304 REL JASPAR yes 22203805
chr2 216223294 216223304 RELA JASPAR yes 80767542
chr2 216223294 216223304 REL JASPAR yes 80767543
chr2 216223294 216223305 NFKB1 JASPAR yes 22203806
chr2 216223294 216223305 NFKB1 JASPAR yes 80767544
chr2 216223294 216223307 NFKB1 JASPAR yes 22203807
chr2 216223294 216223307 NFKB2 JASPAR yes 22203808
chr2 216223294 216223307 NFKB1 JASPAR yes 80767545
chr2 216223294 216223307 NFKB2 JASPAR yes 80767546
chr2 216223295 216223305 NFKB1 JASPAR yes 22203809
chr2 216223295 216223305 RELA JASPAR yes 22203810
chr2 216223295 216223305 NFKB1 JASPAR yes 80767547
chr2 216223295 216223305 RELA JASPAR yes 80767548
chr2 216223295 216223306 NFKB1 JASPAR yes 22203811
chr2 216223295 216223306 NFKB1 JASPAR yes 80767549
chr2 216223301 216223307 MZF1 JASPAR yes 22203812
chr2 216223301 216223307 MZF1 JASPAR yes 80767550
SNP sites on vista34625[chr2:216223263-216223304]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 216223270 rs7580569 A G
YY1
6345155
chr2 216223271 rs537729242 C A,T
YY1
6345156
chr2 216223272 rs57989798 A G
YY1
6345157
chr2 216223302 rs145525336 TC T
MZF1 NFKB1 NFKB2 REL RELA
6345158
Genes possibly regulated by vista34625[chr2:216223263-216223304]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 216176540 216214487 + ATIC ENSG00000138363.10 216176540 0.87 0.99 3116 53277
chr2 216225163 216300895 - FN1 ENSG00000115414.14 216300895 0.93 0.96 3117 22409
Expression level of Genes
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miRNAs possibly regulated by vista34625[chr2:216223263-216223304]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results