EnhancerDB
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  3. vista34680[chr2:217312390-217312696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34680[chr2:217312390-217312696]
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Tissue distribution of vista34680
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Transcription factor that possibly regulate vista34680[chr2:217312390-217312696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 217312391 217312412 IRF1 JASPAR yes 22206127
chr2 217312392 217312407 FOXP1 JASPAR yes 22206128
chr2 217312392 217312413 IRF1 JASPAR yes 22206129
chr2 217312393 217312414 IRF1 JASPAR yes 22206130
chr2 217312397 217312412 FOXP1 JASPAR yes 22206131
chr2 217312397 217312418 IRF1 JASPAR yes 22206132
chr2 217312398 217312413 FOXP1 JASPAR yes 22206133
chr2 217312401 217312416 STAT2 JASPAR yes 22206134
chr2 217312411 217312419 GATA3 JASPAR yes 22206135
chr2 217312449 217312461 GLI2 JASPAR yes 22206136
chr2 217312449 217312461 ZBTB7B JASPAR yes 22206137
chr2 217312452 217312457 SP1 TRANSFAC yes 22206138
chr2 217312472 217312478 NFIC JASPAR yes 22206139
chr2 217312474 217312478 H1TF2 TRANSFAC yes 22206140
chr2 217312474 217312478 NFE TRANSFAC yes 22206141
chr2 217312474 217312478 SRF TRANSFAC yes 22206142
chr2 217312514 217312520 HiNF-A TRANSFAC yes 22206143
chr2 217312520 217312538 SRF JASPAR yes 22206144
chr2 217312527 217312539 YY1 JASPAR yes 22206145
chr2 217312536 217312547 NFKB1 JASPAR yes 22206146
chr2 217312537 217312542 ETS2 TRANSFAC yes 22206147
chr2 217312545 217312556 FOXP2 JASPAR yes 22206148
chr2 217312546 217312554 FOXO3 JASPAR yes 22206149
chr2 217312547 217312554 FOXD2 JASPAR yes 22206150
chr2 217312547 217312554 FOXI1 JASPAR yes 22206151
chr2 217312547 217312554 FOXL1 JASPAR yes 22206152
chr2 217312547 217312554 FOXO4 JASPAR yes 22206153
chr2 217312547 217312554 FOXO6 JASPAR yes 22206154
chr2 217312547 217312554 FOXP3 JASPAR yes 22206155
chr2 217312547 217312555 FOXD1 JASPAR yes 22206156
chr2 217312547 217312555 FOXG1 JASPAR yes 22206157
chr2 217312547 217312555 FOXO3 JASPAR yes 22206158
chr2 217312554 217312558 H1TF2 TRANSFAC yes 22206159
chr2 217312554 217312558 NFE TRANSFAC yes 22206160
chr2 217312554 217312558 SRF TRANSFAC yes 22206161
chr2 217312556 217312575 RFX2 JASPAR yes 22206162
chr2 217312560 217312576 RFX2 JASPAR yes 22206163
chr2 217312560 217312576 RFX3 JASPAR yes 22206164
chr2 217312560 217312576 RFX4 JASPAR yes 22206165
chr2 217312560 217312576 RFX5 JASPAR yes 22206166
chr2 217312585 217312595 RUNX3 JASPAR yes 22206167
chr2 217312585 217312596 RUNX1 JASPAR yes 22206168
chr2 217312591 217312595 YY1 TRANSFAC yes 22206169
chr2 217312633 217312639 SOX10 JASPAR yes 22206170
chr2 217312680 217312686 YY1 JASPAR yes 22206171
SNP sites on vista34680[chr2:217312390-217312696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 217312392 rs11285787 CA C
FOXP1 IRF1
6353318
chr2 217312392 rs796330087 CA C
FOXP1 IRF1
6353319
chr2 217312475 rs560156758 C T
H1TF2 NFE NFIC SRF
6353320
chr2 217312482 rs74752578 C T no 6353321
chr2 217312503 rs144907526 A G no 6353322
chr2 217312535 rs7598616 G A
SRF YY1
6353323
chr2 217312558 rs571822713 A G
H1TF2 NFE RFX2 SRF
6353324
Genes possibly regulated by vista34680[chr2:217312390-217312696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 217122588 217236750 - MARCH4 ENSG00000144583.4 217236750 0.99 0.94 3122 24360
chr2 217277137 217347776 + SMARCAL1 ENSG00000138375.8 217277137 0.61 0.99 3123 64747
chr2 217362912 217443903 + RPL37A ENSG00000197756.5 217362912 0.79 1.0 3124 49784
Expression level of Genes
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miRNAs possibly regulated by vista34680[chr2:217312390-217312696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results