EnhancerDB
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  3. vista3476[chr1:156662788-156663099]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3476[chr1:156662788-156663099]
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Tissue distribution of vista3476
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Transcription factor that possibly regulate vista3476[chr1:156662788-156663099]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 156662736 156663370 TCF7L2 UCSC Txn Factor no Conserved 107837286
chr1 156662915 156663264 PHF8 UCSC Txn Factor no Conserved 107837320
chr1 156662783 156662801 IRF2 JASPAR yes 32401298
chr1 156662783 156662801 IRF2 JASPAR yes 118378301
chr1 156662786 156662797 FOS JASPAR yes 32401299
chr1 156662786 156662797 FOS JASPAR yes 118378302
chr1 156662787 156662801 JUN JASPAR yes 32401300
chr1 156662787 156662801 STAT1 JASPAR yes 32401301
chr1 156662787 156662801 JUN JASPAR yes 118378303
chr1 156662787 156662801 STAT1 JASPAR yes 118378304
chr1 156662788 156662799 DUX4 JASPAR yes 32401302
chr1 156662788 156662799 DUX4 JASPAR yes 118378305
chr1 156662788 156662802 IRF7 JASPAR yes 32401303
chr1 156662788 156662802 IRF7 JASPAR yes 118378306
chr1 156662801 156662807 SOX10 JASPAR yes 32401304
chr1 156662801 156662807 SOX10 JASPAR yes 118378307
chr1 156662817 156662823 SP1 TRANSFAC yes 32401305
chr1 156662817 156662823 SP1 TRANSFAC yes 118378308
chr1 156662817 156662827 SP1 JASPAR yes 32401306
chr1 156662817 156662827 SP1 JASPAR yes 118378309
chr1 156662819 156662833 PLAG1 JASPAR yes 32401307
chr1 156662819 156662833 PLAG1 JASPAR yes 118378310
chr1 156662826 156662840 GLIS2 JASPAR yes 32401308
chr1 156662826 156662840 GLIS3 JASPAR yes 32401309
chr1 156662826 156662840 ZIC1 JASPAR yes 32401310
chr1 156662826 156662840 GLIS2 JASPAR yes 118378311
chr1 156662826 156662840 GLIS3 JASPAR yes 118378312
chr1 156662826 156662840 ZIC1 JASPAR yes 118378313
chr1 156662826 156662841 ZIC3 JASPAR yes 32401311
chr1 156662826 156662841 ZIC4 JASPAR yes 32401312
chr1 156662826 156662841 ZIC3 JASPAR yes 118378314
chr1 156662826 156662841 ZIC4 JASPAR yes 118378315
chr1 156662828 156662843 RUNX2 JASPAR yes 32401313
chr1 156662828 156662843 RUNX2 JASPAR yes 118378316
chr1 156662828 156662848 RREB1 JASPAR yes 32401314
chr1 156662828 156662848 RREB1 JASPAR yes 118378317
chr1 156662845 156662855 SP1 JASPAR yes 32401315
chr1 156662845 156662855 SP1 JASPAR yes 118378318
chr1 156662847 156662851 NFE TRANSFAC yes 32401316
chr1 156662847 156662851 NFE TRANSFAC yes 118378319
chr1 156662861 156662873 NHLH1 JASPAR yes 32401317
chr1 156662861 156662873 NHLH1 JASPAR yes 118378320
chr1 156662862 156662872 NHLH1 JASPAR yes 32401318
chr1 156662862 156662872 NHLH1 JASPAR yes 118378321
chr1 156662864 156662873 ZEB1 JASPAR yes 32401319
chr1 156662864 156662873 ZEB1 JASPAR yes 118378322
chr1 156662865 156662873 TBX15 JASPAR yes 32401320
chr1 156662865 156662873 TBX4 JASPAR yes 32401321
chr1 156662865 156662873 TBX15 JASPAR yes 118378323
chr1 156662865 156662873 TBX4 JASPAR yes 118378324
chr1 156662888 156662900 TAL1 JASPAR yes 32401322
chr1 156662888 156662900 TAL1 JASPAR yes 118378325
chr1 156662889 156662902 ZBTB18 JASPAR yes 32401323
chr1 156662889 156662902 ZBTB18 JASPAR yes 118378326
chr1 156662890 156662900 FIGLA JASPAR yes 32401324
chr1 156662890 156662900 ID4 JASPAR yes 32401325
chr1 156662890 156662900 MSC JASPAR yes 32401326
chr1 156662890 156662900 MYF6 JASPAR yes 32401327
chr1 156662890 156662900 TCF3 JASPAR yes 32401328
chr1 156662890 156662900 TCF4 JASPAR yes 32401329
chr1 156662890 156662900 FIGLA JASPAR yes 118378327
chr1 156662890 156662900 ID4 JASPAR yes 118378328
chr1 156662890 156662900 MSC JASPAR yes 118378329
chr1 156662890 156662900 MYF6 JASPAR yes 118378330
chr1 156662890 156662900 TCF3 JASPAR yes 118378331
chr1 156662890 156662900 TCF4 JASPAR yes 118378332
chr1 156662892 156662897 USF2 TRANSFAC yes 32401330
chr1 156662892 156662897 USF2 TRANSFAC yes 118378333
chr1 156662908 156662929 ZNF263 JASPAR yes 32401331
chr1 156662908 156662929 ZNF263 JASPAR yes 118378334
chr1 156662912 156662933 ZNF263 JASPAR yes 32401332
chr1 156662912 156662933 ZNF263 JASPAR yes 118378335
chr1 156662914 156662920 SP1 TRANSFAC yes 32401333
chr1 156662914 156662920 SP1 TRANSFAC yes 118378336
chr1 156662914 156662924 SP1 JASPAR yes 32401334
chr1 156662914 156662924 SP1 JASPAR yes 118378337
chr1 156662914 156662934 RREB1 JASPAR yes 32401335
chr1 156662914 156662934 RREB1 JASPAR yes 118378338
chr1 156662915 156662925 ZNF740 JASPAR yes 32401336
chr1 156662915 156662925 ZNF740 JASPAR yes 118378339
chr1 156662915 156662936 ZNF263 JASPAR yes 32401337
chr1 156662915 156662936 ZNF263 JASPAR yes 118378340
chr1 156662917 156662937 RREB1 JASPAR yes 32401338
chr1 156662917 156662937 RREB1 JASPAR yes 118378341
chr1 156662918 156662924 MZF1 JASPAR yes 32401339
chr1 156662918 156662924 MZF1 JASPAR yes 118378342
chr1 156662919 156662929 SP1 JASPAR yes 32401340
chr1 156662919 156662929 SP1 JASPAR yes 118378343
chr1 156662921 156662941 RREB1 JASPAR yes 32401341
chr1 156662921 156662941 RREB1 JASPAR yes 118378344
chr1 156662932 156662942 NKX2-3 JASPAR yes 32401342
chr1 156662932 156662942 NKX2-3 JASPAR yes 118378345
chr1 156662933 156662942 NKX2-8 JASPAR yes 32401343
chr1 156662933 156662942 NKX2-8 JASPAR yes 118378346
chr1 156662938 156662953 HSF1 JASPAR yes 32401344
chr1 156662938 156662953 HSF1 JASPAR yes 118378347
chr1 156662942 156662953 EBF1 JASPAR yes 32401345
chr1 156662942 156662953 EBF1 JASPAR yes 118378348
chr1 156662958 156662967 SP1 TRANSFAC yes 32401346
chr1 156662958 156662967 SP1 TRANSFAC yes 118378349
chr1 156662958 156662968 SP1 JASPAR yes 32401347
chr1 156662958 156662968 SP1 JASPAR yes 118378350
chr1 156662958 156662975 RXRA JASPAR yes 32401348
chr1 156662958 156662975 RXRA JASPAR yes 118378351
chr1 156662960 156662966 MAZ TRANSFAC yes 32401349
chr1 156662960 156662966 MAZ TRANSFAC yes 118378352
chr1 156662964 156662974 SP1 JASPAR yes 32401350
chr1 156662964 156662974 SP1 JASPAR yes 118378353
chr1 156662965 156662969 LFA1 TRANSFAC yes 32401351
chr1 156662965 156662969 LFA1 TRANSFAC yes 118378354
chr1 156662974 156662985 TFAP2A JASPAR yes 32401352
chr1 156662974 156662985 TFAP2B JASPAR yes 32401353
chr1 156662974 156662985 TFAP2C JASPAR yes 32401354
chr1 156662974 156662985 TFAP2A JASPAR yes 118378355
chr1 156662974 156662985 TFAP2B JASPAR yes 118378356
chr1 156662974 156662985 TFAP2C JASPAR yes 118378357
chr1 156662984 156662989 SP1 TRANSFAC yes 32401355
chr1 156662984 156662989 SP1 TRANSFAC yes 118378358
chr1 156662986 156662991 TFAP2A TRANSFAC yes 32401356
chr1 156662986 156662991 TFAP2A TRANSFAC yes 118378359
chr1 156662986 156662992 MZF1 JASPAR yes 32401357
chr1 156662986 156662992 MZF1 JASPAR yes 118378360
chr1 156662989 156663003 NR2F1 JASPAR yes 32401358
chr1 156662989 156663003 NR2F1 JASPAR yes 118378361
chr1 156662991 156663007 SOX8 JASPAR yes 32401359
chr1 156662991 156663007 SOX8 JASPAR yes 118378362
chr1 156663002 156663006 NFE TRANSFAC yes 32401360
chr1 156663002 156663006 NFE TRANSFAC yes 118378363
chr1 156663019 156663033 TCF7L2 JASPAR yes 32401361
chr1 156663019 156663033 TCF7L2 JASPAR yes 118378364
chr1 156663026 156663031 GATA2 JASPAR yes 32401362
chr1 156663026 156663031 GATA2 JASPAR yes 118378365
chr1 156663027 156663041 E2F7 JASPAR yes 32401363
chr1 156663027 156663041 E2F7 JASPAR yes 118378366
chr1 156663030 156663036 SP1 TRANSFAC yes 32401364
chr1 156663030 156663036 SP1 TRANSFAC yes 118378367
chr1 156663037 156663043 SOX10 JASPAR yes 32401365
chr1 156663037 156663043 SOX10 JASPAR yes 118378368
chr1 156663042 156663047 SP1 TRANSFAC yes 32401366
chr1 156663042 156663047 SP1 TRANSFAC yes 118378369
chr1 156663042 156663049 SP1 TRANSFAC yes 32401367
chr1 156663042 156663049 SP1 TRANSFAC yes 118378370
chr1 156663043 156663063 TP63 JASPAR yes 32401368
chr1 156663043 156663063 TP63 JASPAR yes 118378371
chr1 156663051 156663062 USF2 JASPAR yes 32401369
chr1 156663051 156663062 USF2 JASPAR yes 118378372
chr1 156663051 156663063 HES5 JASPAR yes 32401370
chr1 156663051 156663063 HES5 JASPAR yes 118378373
chr1 156663052 156663062 TFEB JASPAR yes 32401371
chr1 156663052 156663062 TFEB JASPAR yes 118378374
chr1 156663057 156663066 HIC2 JASPAR yes 32401372
chr1 156663057 156663066 HIC2 JASPAR yes 118378375
chr1 156663061 156663073 YY1 JASPAR yes 32401373
chr1 156663061 156663073 YY1 JASPAR yes 118378376
chr1 156663083 156663087 H4TF2 TRANSFAC yes 32401374
chr1 156663083 156663087 H4TF2 TRANSFAC yes 118378377
chr1 156663098 156663104 LEF1 TRANSFAC yes 32401375
chr1 156663098 156663104 SOX10 JASPAR yes 32401376
chr1 156663098 156663104 LEF1 TRANSFAC yes 118378378
chr1 156663098 156663104 SOX10 JASPAR yes 118378379
SNP sites on vista3476[chr1:156662788-156663099]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 156662830 rs561698673 C A
GLIS2 GLIS3 PLAG1 RREB1 RUNX2 TCF7L2 ZIC1 ZIC3 ZIC4
650537
chr1 156662904 rs537551664 A G
TCF7L2
650538
chr1 156662909 rs144159767 G A
TCF7L2 ZNF263
650539
chr1 156662930 rs184898607 C G,T
PHF8 RREB1 TCF7L2 ZNF263
650540
chr1 156662931 rs12740839 A G
PHF8 RREB1 TCF7L2 ZNF263
650541
chr1 156663034 rs75785999 C T
E2F7 PHF8 SP1 TCF7L2
650542
chr1 156663083 rs564301985 C T
H4TF2 PHF8 TCF7L2
650543
Genes possibly regulated by vista3476[chr1:156662788-156663099]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 156564279 156571288 - GPATCH4 ENSG00000160818.12 156571288 0.77 0.99 1373 8500
chr1 156589086 156595517 + HAPLN2 ENSG00000132702.8 156589086 0.92 1.0 1374 26298
chr1 156611182 156629324 + BCAN ENSG00000132692.14 156611182 0.93 1.0 1375 48394
chr1 156638555 156647189 - NES ENSG00000132688.10 156647189 0.8 0.97 1376 84401
chr1 156669398 156675608 - CRABP2 ENSG00000143320.4 156675608 0.97 1.0 1377 87491
chr1 156691683 156698591 - ISG20L2 ENSG00000143319.12 156698591 0.72 1.0 1378 64508
chr1 156698234 156706752 + RRNAD1 ENSG00000143303.7 156698234 0.61 1.0 1379 64865
chr1 156707095 156711382 - MRPL24 ENSG00000143314.8 156711382 0.6 0.99 1380 51717
chr1 156711899 156736717 - HDGF ENSG00000143321.14 156736717 0.7 0.99 1381 26382
chr1 156720402 156770607 + PRCC ENSG00000143294.10 156720402 0.63 0.99 1382 42697
Expression level of Genes
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miRNAs possibly regulated by vista3476[chr1:156662788-156663099]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results