EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id	More
chr2	219844526	219845157	CTCF	UCSC Txn Factor	no	Conserved	108435274
chr2	219844657	219845008	RUNX3	UCSC Txn Factor	no	Conserved	108435275
chr2	219844792	219845065	RAD21	UCSC Txn Factor	no	Conserved	108435276
chr2	219844905	219844911	SOX10	JASPAR	yes		22212261
chr2	219844913	219844934	ZNF263	JASPAR	yes		22212262
chr2	219844914	219844920	MZF1	JASPAR	yes		22212263
chr2	219844933	219844952	CTCF	JASPAR	yes		22212264
chr2	219844951	219844966	ZBTB33	JASPAR	yes		22212265
chr2	219844953	219844958	SP1	TRANSFAC	yes		22212266
chr2	219844974	219844987	SMAD2	JASPAR	yes		22212267

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id	More

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr2	219745085	219764303	+	WNT10A	ENSG00000135925.4	219745085	0.84	1.0	3154	216
chr2	219824377	219826876	+	CDK5R2	ENSG00000171450.4	219824377	0.92	1.0	3155	79508
chr2	219845809	219850379	-	FEV	ENSG00000163497.2	219850379	0.95	0.93	3156	94617
chr2	219854911	219858143	-	CRYBA2	ENSG00000163499.7	219858143	1.0	0.98	3157	86853
chr2	219867568	219906249	-	CCDC108	ENSG00000181378.9	219906249	0.97	1.0	3158	38747
chr2	219919142	219925189	-	IHH	ENSG00000163501.6	219925189	0.94	0.96	3159	19807

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results