EnhancerDB
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  3. vista34819[chr2:220557392-220557516]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34819[chr2:220557392-220557516]
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Tissue distribution of vista34819
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Transcription factor that possibly regulate vista34819[chr2:220557392-220557516]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 220557389 220557393 NFE TRANSFAC yes 22212953
chr2 220557389 220557393 NFE TRANSFAC yes 81047117
chr2 220557417 220557421 H4TF2 TRANSFAC yes 22212954
chr2 220557417 220557421 H4TF2 TRANSFAC yes 81047118
chr2 220557418 220557438 TP63 JASPAR yes 22212955
chr2 220557418 220557438 TP63 JASPAR yes 81047119
chr2 220557419 220557437 TP63 JASPAR yes 22212956
chr2 220557419 220557437 TP63 JASPAR yes 81047120
chr2 220557420 220557430 SP1 JASPAR yes 22212957
chr2 220557420 220557430 SP1 JASPAR yes 81047121
chr2 220557422 220557426 NFE TRANSFAC yes 22212958
chr2 220557422 220557426 NFE TRANSFAC yes 81047122
chr2 220557425 220557431 MZF1 JASPAR yes 22212959
chr2 220557425 220557431 MZF1 JASPAR yes 81047123
chr2 220557436 220557442 NFE2 TRANSFAC yes 22212960
chr2 220557436 220557442 NFE2 TRANSFAC yes 81047124
chr2 220557452 220557465 DUXA JASPAR yes 22212961
chr2 220557452 220557465 DUXA JASPAR yes 81047125
chr2 220557456 220557466 MEOX2 JASPAR yes 22212962
chr2 220557456 220557466 MEOX2 JASPAR yes 81047126
chr2 220557457 220557473 POU4F2 JASPAR yes 22212963
chr2 220557457 220557473 POU4F2 JASPAR yes 81047127
chr2 220557458 220557468 PAX7 JASPAR yes 22212964
chr2 220557458 220557468 PAX7 JASPAR yes 81047128
chr2 220557460 220557472 HNF1B JASPAR yes 22212965
chr2 220557460 220557472 HNF1B JASPAR yes 81047129
chr2 220557476 220557487 GCM1 JASPAR yes 22212966
chr2 220557476 220557487 GCM1 JASPAR yes 81047130
chr2 220557484 220557492 MEIS2 JASPAR yes 22212967
chr2 220557484 220557492 MEIS3 JASPAR yes 22212968
chr2 220557484 220557492 MEIS2 JASPAR yes 81047131
chr2 220557484 220557492 MEIS3 JASPAR yes 81047132
chr2 220557496 220557501 TFAP2A TRANSFAC yes 22212969
chr2 220557496 220557501 TFAP2A TRANSFAC yes 81047133
chr2 220557496 220557502 MZF1 JASPAR yes 22212970
chr2 220557496 220557502 MZF1 JASPAR yes 81047134
SNP sites on vista34819[chr2:220557392-220557516]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 220557403 rs141589487 T A no 6373068
chr2 220557429 rs116303786 C T
MZF1 SP1 TP63
6373069
chr2 220557467 rs13026396 T C
HNF1B PAX7 POU4F2
6373070
chr2 220557487 rs115205307 G A
GCM1 MEIS2 MEIS3
6373071
chr2 220557489 rs6436159 C T
MEIS2 MEIS3
6373072
Genes possibly regulated by vista34819[chr2:220557392-220557516]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 220462582 220481173 + STK11IP ENSG00000144589.16 220462582 0.75 1.0 3183 5190
chr2 220492049 220506702 + SLC4A3 ENSG00000114923.12 220492049 0.95 1.0 3184 34657
Expression level of Genes
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miRNAs possibly regulated by vista34819[chr2:220557392-220557516]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results