EnhancerDB
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  3. vista34873[chr2:223823432-223823602]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34873[chr2:223823432-223823602]
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Tissue distribution of vista34873
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Transcription factor that possibly regulate vista34873[chr2:223823432-223823602]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 223823437 223823453 SOX8 JASPAR yes 22214873
chr2 223823437 223823453 SOX8 JASPAR yes 81228627
chr2 223823446 223823450 YY1 TRANSFAC yes 22214874
chr2 223823446 223823450 YY1 TRANSFAC yes 81228628
chr2 223823456 223823470 GATA2 JASPAR yes 22214875
chr2 223823456 223823470 GATA2 JASPAR yes 81228629
chr2 223823458 223823466 GATA3 JASPAR yes 22214876
chr2 223823458 223823466 GATA3 JASPAR yes 81228630
chr2 223823458 223823473 FOXP1 JASPAR yes 22214877
chr2 223823458 223823473 FOXP1 JASPAR yes 81228631
chr2 223823461 223823467 TBP TRANSFAC yes 22214878
chr2 223823461 223823467 TBP TRANSFAC yes 81228632
chr2 223823466 223823481 HNF1A JASPAR yes 22214879
chr2 223823466 223823481 HNF1A JASPAR yes 81228633
chr2 223823467 223823480 HNF1B JASPAR yes 22214880
chr2 223823467 223823480 HNF1B JASPAR yes 81228634
chr2 223823475 223823487 GRHL1 JASPAR yes 22214881
chr2 223823475 223823487 GRHL1 JASPAR yes 81228635
chr2 223823476 223823479 MYB TRANSFAC yes 22214882
chr2 223823476 223823479 MYB TRANSFAC yes 81228636
chr2 223823476 223823487 PROP1 JASPAR yes 22214883
chr2 223823476 223823487 PROP1 JASPAR yes 81228637
chr2 223823478 223823490 FOXI1 JASPAR yes 22214884
chr2 223823478 223823490 FOXI1 JASPAR yes 81228638
chr2 223823479 223823491 FOXC2 JASPAR yes 22214885
chr2 223823479 223823491 FOXC2 JASPAR yes 81228639
chr2 223823479 223823493 FOXF2 JASPAR yes 22214886
chr2 223823479 223823493 FOXF2 JASPAR yes 81228640
chr2 223823480 223823488 FOXG1 JASPAR yes 22214887
chr2 223823480 223823488 FOXO3 JASPAR yes 22214888
chr2 223823480 223823488 FOXG1 JASPAR yes 81228641
chr2 223823480 223823488 FOXO3 JASPAR yes 81228642
chr2 223823480 223823491 FOXC1 JASPAR yes 22214889
chr2 223823480 223823491 FOXC1 JASPAR yes 81228643
chr2 223823493 223823497 YY1 TRANSFAC yes 22214890
chr2 223823493 223823497 YY1 TRANSFAC yes 81228644
chr2 223823500 223823510 RELA JASPAR yes 22214891
chr2 223823500 223823510 REL JASPAR yes 22214892
chr2 223823500 223823510 RELA JASPAR yes 81228645
chr2 223823500 223823510 REL JASPAR yes 81228646
chr2 223823500 223823511 NFKB1 JASPAR yes 22214893
chr2 223823500 223823511 NFKB1 JASPAR yes 81228647
chr2 223823510 223823521 USF1 JASPAR yes 22214894
chr2 223823510 223823521 USF2 JASPAR yes 22214895
chr2 223823510 223823521 USF1 JASPAR yes 81228648
chr2 223823510 223823521 USF2 JASPAR yes 81228649
chr2 223823515 223823530 NFYB JASPAR yes 22214896
chr2 223823515 223823530 NFYB JASPAR yes 81228650
chr2 223823517 223823533 NFYA JASPAR yes 22214897
chr2 223823517 223823533 NFYA JASPAR yes 81228651
chr2 223823518 223823536 NFYA JASPAR yes 22214898
chr2 223823518 223823536 NFYA JASPAR yes 81228652
chr2 223823522 223823526 H1TF2 TRANSFAC yes 22214899
chr2 223823522 223823526 NFE TRANSFAC yes 22214900
chr2 223823522 223823526 SRF TRANSFAC yes 22214901
chr2 223823522 223823526 H1TF2 TRANSFAC yes 81228653
chr2 223823522 223823526 NFE TRANSFAC yes 81228654
chr2 223823522 223823526 SRF TRANSFAC yes 81228655
chr2 223823522 223823532 HOXA13 JASPAR yes 22214902
chr2 223823522 223823532 HOXA13 JASPAR yes 81228656
chr2 223823537 223823558 IRF1 JASPAR yes 22214903
chr2 223823537 223823558 IRF1 JASPAR yes 81228657
chr2 223823539 223823554 STAT2 JASPAR yes 22214904
chr2 223823539 223823554 STAT2 JASPAR yes 81228658
chr2 223823540 223823554 STAT1 JASPAR yes 22214905
chr2 223823540 223823554 STAT1 JASPAR yes 81228659
chr2 223823541 223823553 IRF1 JASPAR yes 22214906
chr2 223823541 223823553 IRF1 JASPAR yes 81228660
chr2 223823541 223823555 IRF7 JASPAR yes 22214907
chr2 223823541 223823555 IRF8 JASPAR yes 22214908
chr2 223823541 223823555 IRF7 JASPAR yes 81228661
chr2 223823541 223823555 IRF8 JASPAR yes 81228662
chr2 223823541 223823556 IRF9 JASPAR yes 22214909
chr2 223823541 223823556 IRF9 JASPAR yes 81228663
chr2 223823560 223823578 IRF2 JASPAR yes 22214910
chr2 223823560 223823578 IRF2 JASPAR yes 81228664
chr2 223823572 223823576 YY1 TRANSFAC yes 22214911
chr2 223823572 223823576 YY1 TRANSFAC yes 81228665
chr2 223823576 223823583 JUN TRANSFAC yes 22214912
chr2 223823576 223823583 JUN TRANSFAC yes 81228666
chr2 223823594 223823602 OTX1 JASPAR yes 22214913
chr2 223823594 223823602 OTX2 JASPAR yes 22214914
chr2 223823594 223823602 OTX1 JASPAR yes 81228667
chr2 223823594 223823602 OTX2 JASPAR yes 81228668
SNP sites on vista34873[chr2:223823432-223823602]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 223823549 rs144660220 G T
IRF1 IRF7 IRF8 IRF9 STAT1 STAT2
6389319
chr2 223823585 rs7585246 C G no 6389320
Genes possibly regulated by vista34873[chr2:223823432-223823602]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 223725652 223809357 + ACSL3 ENSG00000123983.9 223725652 0.69 0.99 3191 2220
chr2 223916532 224063117 + KCNE4 ENSG00000152049.5 223916532 0.83 0.99 3192 7070
Expression level of Genes
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miRNAs possibly regulated by vista34873[chr2:223823432-223823602]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results