EnhancerDB
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  3. vista34878[chr2:223987654-223987955]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34878[chr2:223987654-223987955]
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Tissue distribution of vista34878
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Transcription factor that possibly regulate vista34878[chr2:223987654-223987955]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 223987650 223987665 MEF2C JASPAR yes 22215066
chr2 223987650 223987665 MEF2C JASPAR yes 81242729
chr2 223987651 223987666 MEF2A JASPAR yes 22215067
chr2 223987651 223987666 MEF2A JASPAR yes 81242730
chr2 223987652 223987664 MEF2A JASPAR yes 22215068
chr2 223987652 223987664 MEF2D JASPAR yes 22215069
chr2 223987652 223987664 MEF2A JASPAR yes 81242731
chr2 223987652 223987664 MEF2D JASPAR yes 81242732
chr2 223987653 223987663 MEF2A JASPAR yes 22215070
chr2 223987653 223987663 MEF2A JASPAR yes 81242733
chr2 223987658 223987662 TEAD2 TRANSFAC yes 22215071
chr2 223987658 223987662 TEAD2 TRANSFAC yes 81242734
chr2 223987658 223987663 TBP TRANSFAC yes 22215072
chr2 223987658 223987663 TBP TRANSFAC yes 81242735
chr2 223987658 223987664 TFIID TRANSFAC yes 22215073
chr2 223987658 223987664 TFIID TRANSFAC yes 81242736
chr2 223987661 223987673 YY1 JASPAR yes 22215074
chr2 223987661 223987673 YY1 JASPAR yes 81242737
chr2 223987690 223987695 ETS2 TRANSFAC yes 22215075
chr2 223987690 223987695 ETS2 TRANSFAC yes 81242738
chr2 223987698 223987710 FOXI1 JASPAR yes 22215076
chr2 223987698 223987710 FOXI1 JASPAR yes 81242739
chr2 223987701 223987705 YY1 TRANSFAC yes 22215077
chr2 223987701 223987705 YY1 TRANSFAC yes 81242740
chr2 223987735 223987746 EBF1 JASPAR yes 22215078
chr2 223987735 223987746 EBF1 JASPAR yes 81242741
chr2 223987735 223987750 ZBTB33 JASPAR yes 22215079
chr2 223987735 223987750 ZBTB33 JASPAR yes 81242742
chr2 223987736 223987747 EBF1 JASPAR yes 22215080
chr2 223987736 223987747 EBF1 JASPAR yes 81242743
chr2 223987741 223987753 PKNOX1 JASPAR yes 22215081
chr2 223987741 223987753 PKNOX2 JASPAR yes 22215082
chr2 223987741 223987753 TGIF1 JASPAR yes 22215083
chr2 223987741 223987753 TGIF2 JASPAR yes 22215084
chr2 223987741 223987753 PKNOX1 JASPAR yes 81242744
chr2 223987741 223987753 PKNOX2 JASPAR yes 81242745
chr2 223987741 223987753 TGIF1 JASPAR yes 81242746
chr2 223987741 223987753 TGIF2 JASPAR yes 81242747
chr2 223987750 223987762 PKNOX1 JASPAR yes 22215085
chr2 223987750 223987762 TGIF1 JASPAR yes 22215086
chr2 223987750 223987762 TGIF2 JASPAR yes 22215087
chr2 223987750 223987762 PKNOX1 JASPAR yes 81242748
chr2 223987750 223987762 TGIF1 JASPAR yes 81242749
chr2 223987750 223987762 TGIF2 JASPAR yes 81242750
chr2 223987757 223987773 SOX4 JASPAR yes 22215088
chr2 223987757 223987773 SOX4 JASPAR yes 81242751
chr2 223987765 223987784 RFX2 JASPAR yes 22215089
chr2 223987765 223987784 RFX2 JASPAR yes 81242752
chr2 223987769 223987785 RFX2 JASPAR yes 22215090
chr2 223987769 223987785 RFX3 JASPAR yes 22215091
chr2 223987769 223987785 RFX5 JASPAR yes 22215092
chr2 223987769 223987785 RFX2 JASPAR yes 81242753
chr2 223987769 223987785 RFX3 JASPAR yes 81242754
chr2 223987769 223987785 RFX5 JASPAR yes 81242755
chr2 223987774 223987785 FOXA1 JASPAR yes 22215093
chr2 223987774 223987785 FOXA1 JASPAR yes 81242756
chr2 223987775 223987789 MTF1 JASPAR yes 22215094
chr2 223987775 223987789 MTF1 JASPAR yes 81242757
chr2 223987792 223987805 DUXA JASPAR yes 22215095
chr2 223987792 223987805 DUXA JASPAR yes 81242758
chr2 223987793 223987804 PHOX2A JASPAR yes 22215096
chr2 223987793 223987804 PROP1 JASPAR yes 22215097
chr2 223987793 223987804 PHOX2A JASPAR yes 81242759
chr2 223987793 223987804 PROP1 JASPAR yes 81242760
chr2 223987793 223987809 POU4F2 JASPAR yes 22215098
chr2 223987793 223987809 POU4F3 JASPAR yes 22215099
chr2 223987793 223987809 POU4F2 JASPAR yes 81242761
chr2 223987793 223987809 POU4F3 JASPAR yes 81242762
chr2 223987797 223987805 LMX1A JASPAR yes 22215100
chr2 223987797 223987805 LMX1B JASPAR yes 22215101
chr2 223987797 223987805 NKX6-1 JASPAR yes 22215102
chr2 223987797 223987805 NKX6-2 JASPAR yes 22215103
chr2 223987797 223987805 VAX1 JASPAR yes 22215104
chr2 223987797 223987805 VAX2 JASPAR yes 22215105
chr2 223987797 223987805 VSX1 JASPAR yes 22215106
chr2 223987797 223987805 VSX2 JASPAR yes 22215107
chr2 223987797 223987805 LMX1A JASPAR yes 81242763
chr2 223987797 223987805 LMX1B JASPAR yes 81242764
chr2 223987797 223987805 NKX6-1 JASPAR yes 81242765
chr2 223987797 223987805 NKX6-2 JASPAR yes 81242766
chr2 223987797 223987805 VAX1 JASPAR yes 81242767
chr2 223987797 223987805 VAX2 JASPAR yes 81242768
chr2 223987797 223987805 VSX1 JASPAR yes 81242769
chr2 223987797 223987805 VSX2 JASPAR yes 81242770
chr2 223987804 223987810 NFIC JASPAR yes 22215108
chr2 223987804 223987810 NFIC JASPAR yes 81242771
chr2 223987804 223987819 SCRT1 JASPAR yes 22215109
chr2 223987804 223987819 SCRT1 JASPAR yes 81242772
chr2 223987808 223987818 MSC JASPAR yes 22215110
chr2 223987808 223987818 MSC JASPAR yes 81242773
chr2 223987814 223987829 STAT1 JASPAR yes 22215111
chr2 223987814 223987829 STAT1 JASPAR yes 81242774
chr2 223987816 223987827 STAT1 JASPAR yes 22215112
chr2 223987816 223987827 STAT1 JASPAR yes 81242775
chr2 223987824 223987836 POU3F1 JASPAR yes 22215113
chr2 223987824 223987836 POU3F2 JASPAR yes 22215114
chr2 223987824 223987836 POU3F1 JASPAR yes 81242776
chr2 223987824 223987836 POU3F2 JASPAR yes 81242777
chr2 223987824 223987837 POU3F3 JASPAR yes 22215115
chr2 223987824 223987837 POU3F3 JASPAR yes 81242778
chr2 223987826 223987835 POU3F4 JASPAR yes 22215116
chr2 223987826 223987835 POU5F1B JASPAR yes 22215117
chr2 223987826 223987835 POU3F4 JASPAR yes 81242779
chr2 223987826 223987835 POU5F1B JASPAR yes 81242780
chr2 223987832 223987841 NFIX JASPAR yes 22215118
chr2 223987832 223987841 NFIX JASPAR yes 81242781
chr2 223987832 223987842 NFIA JASPAR yes 22215119
chr2 223987832 223987842 NFIA JASPAR yes 81242782
chr2 223987834 223987840 NFIC JASPAR yes 22215120
chr2 223987834 223987840 NFIC JASPAR yes 81242783
chr2 223987844 223987860 SOX4 JASPAR yes 22215121
chr2 223987844 223987860 SOX4 JASPAR yes 81242784
chr2 223987849 223987855 NFIC JASPAR yes 22215122
chr2 223987849 223987855 NFIC JASPAR yes 81242785
chr2 223987893 223987908 FOXA1 JASPAR yes 22215123
chr2 223987893 223987908 FOXA1 JASPAR yes 81242786
chr2 223987894 223987909 FOXP1 JASPAR yes 22215124
chr2 223987894 223987909 FOXP1 JASPAR yes 81242787
chr2 223987895 223987904 SRY JASPAR yes 22215125
chr2 223987895 223987904 SRY JASPAR yes 81242788
chr2 223987895 223987906 FOXP2 JASPAR yes 22215126
chr2 223987895 223987906 FOXP2 JASPAR yes 81242789
chr2 223987895 223987907 FOXC2 JASPAR yes 22215127
chr2 223987895 223987907 FOXC2 JASPAR yes 81242790
chr2 223987895 223987909 FOXF2 JASPAR yes 22215128
chr2 223987895 223987909 FOXF2 JASPAR yes 81242791
chr2 223987896 223987904 FOXD1 JASPAR yes 22215129
chr2 223987896 223987904 FOXG1 JASPAR yes 22215130
chr2 223987896 223987904 FOXO3 JASPAR yes 22215131
chr2 223987896 223987904 FOXD1 JASPAR yes 81242792
chr2 223987896 223987904 FOXG1 JASPAR yes 81242793
chr2 223987896 223987904 FOXO3 JASPAR yes 81242794
chr2 223987896 223987907 FOXB1 JASPAR yes 22215132
chr2 223987896 223987907 FOXC1 JASPAR yes 22215133
chr2 223987896 223987907 FOXB1 JASPAR yes 81242795
chr2 223987896 223987907 FOXC1 JASPAR yes 81242796
chr2 223987897 223987904 FOXD2 JASPAR yes 22215134
chr2 223987897 223987904 FOXI1 JASPAR yes 22215135
chr2 223987897 223987904 FOXL1 JASPAR yes 22215136
chr2 223987897 223987904 FOXO4 JASPAR yes 22215137
chr2 223987897 223987904 FOXO6 JASPAR yes 22215138
chr2 223987897 223987904 FOXP3 JASPAR yes 22215139
chr2 223987897 223987904 FOXD2 JASPAR yes 81242797
chr2 223987897 223987904 FOXI1 JASPAR yes 81242798
chr2 223987897 223987904 FOXL1 JASPAR yes 81242799
chr2 223987897 223987904 FOXO4 JASPAR yes 81242800
chr2 223987897 223987904 FOXO6 JASPAR yes 81242801
chr2 223987897 223987904 FOXP3 JASPAR yes 81242802
chr2 223987897 223987908 FOXA1 JASPAR yes 22215140
chr2 223987897 223987908 FOXA1 JASPAR yes 81242803
chr2 223987900 223987907 NKX3-1 JASPAR yes 22215141
chr2 223987900 223987907 NKX3-1 JASPAR yes 81242804
chr2 223987900 223987914 POU4F1 JASPAR yes 22215142
chr2 223987900 223987914 POU4F1 JASPAR yes 81242805
chr2 223987919 223987931 FOXI1 JASPAR yes 22215143
chr2 223987919 223987931 FOXI1 JASPAR yes 81242806
chr2 223987922 223987926 YY1 TRANSFAC yes 22215144
chr2 223987922 223987926 YY1 TRANSFAC yes 81242807
chr2 223987927 223987932 MYB TRANSFAC yes 22215145
chr2 223987927 223987932 MYB TRANSFAC yes 81242808
chr2 223987952 223987970 NFYA JASPAR yes 22215146
chr2 223987952 223987970 NFYA JASPAR yes 81242809
SNP sites on vista34878[chr2:223987654-223987955]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 223987717 rs552458178 G C no 6390888
chr2 223987738 rs140514558 C T
EBF1 ZBTB33
6390889
chr2 223987757 rs6761103 G A
PKNOX1 SOX4 TGIF1 TGIF2
6390890
chr2 223987819 rs145519094 T G
SCRT1 STAT1
6390891
chr2 223987838 rs6761013 C T
NFIA NFIC NFIX
6390892
chr2 223987895 rs111507769 G A
FOXA1 FOXC2 FOXF2 FOXP1 FOXP2 SRY
6390893
chr2 223987941 rs138142183 C T no 6390894
Genes possibly regulated by vista34878[chr2:223987654-223987955]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 223916532 224063117 + KCNE4 ENSG00000152049.5 223916532 0.83 0.99 3192 28878
Expression level of Genes
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miRNAs possibly regulated by vista34878[chr2:223987654-223987955]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results