EnhancerDB
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  3. vista34887[chr2:224452508-224452858]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34887[chr2:224452508-224452858]
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Tissue distribution of vista34887
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Transcription factor that possibly regulate vista34887[chr2:224452508-224452858]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 224452503 224452509 HiNF-A TRANSFAC yes 22215567
chr2 224452503 224452509 HiNF-A TRANSFAC yes 81267202
chr2 224452533 224452544 HOXC13 JASPAR yes 22215568
chr2 224452533 224452544 HOXC13 JASPAR yes 81267203
chr2 224452534 224452544 HOXA13 JASPAR yes 22215569
chr2 224452534 224452544 HOXB13 JASPAR yes 22215570
chr2 224452534 224452544 HOXD13 JASPAR yes 22215571
chr2 224452534 224452544 HOXA13 JASPAR yes 81267204
chr2 224452534 224452544 HOXB13 JASPAR yes 81267205
chr2 224452534 224452544 HOXD13 JASPAR yes 81267206
chr2 224452536 224452540 TEAD2 TRANSFAC yes 22215572
chr2 224452536 224452540 TEAD2 TRANSFAC yes 81267207
chr2 224452536 224452541 TBP TRANSFAC yes 22215573
chr2 224452536 224452541 TBP TRANSFAC yes 81267208
chr2 224452536 224452542 TFIID TRANSFAC yes 22215574
chr2 224452536 224452542 TFIID TRANSFAC yes 81267209
chr2 224452543 224452547 NFE TRANSFAC yes 22215575
chr2 224452543 224452547 NFE TRANSFAC yes 81267210
chr2 224452547 224452562 ZBTB33 JASPAR yes 22215576
chr2 224452547 224452562 ZBTB33 JASPAR yes 81267211
chr2 224452550 224452565 ZBTB33 JASPAR yes 22215577
chr2 224452550 224452565 ZBTB33 JASPAR yes 81267212
chr2 224452556 224452563 JUN TRANSFAC yes 22215578
chr2 224452556 224452563 SP1 TRANSFAC yes 22215579
chr2 224452556 224452563 JUN TRANSFAC yes 81267213
chr2 224452556 224452563 SP1 TRANSFAC yes 81267214
chr2 224452582 224452594 INSM1 JASPAR yes 22215580
chr2 224452582 224452594 INSM1 JASPAR yes 81267215
chr2 224452583 224452593 MZF1 JASPAR yes 22215581
chr2 224452583 224452593 MZF1 JASPAR yes 81267216
chr2 224452595 224452600 SP1 TRANSFAC yes 22215582
chr2 224452595 224452600 SP1 TRANSFAC yes 81267217
chr2 224452595 224452601 SP1 TRANSFAC yes 22215583
chr2 224452595 224452601 SP1 TRANSFAC yes 81267218
chr2 224452595 224452602 SP1 TRANSFAC yes 22215584
chr2 224452595 224452602 SP1 TRANSFAC yes 81267219
chr2 224452602 224452615 DUXA JASPAR yes 22215585
chr2 224452602 224452615 DUXA JASPAR yes 81267220
chr2 224452603 224452614 PHOX2A JASPAR yes 22215586
chr2 224452603 224452614 PROP1 JASPAR yes 22215587
chr2 224452603 224452614 PHOX2A JASPAR yes 81267221
chr2 224452603 224452614 PROP1 JASPAR yes 81267222
chr2 224452605 224452616 HOXA10 JASPAR yes 22215588
chr2 224452605 224452616 HOXA10 JASPAR yes 81267223
chr2 224452605 224452620 HNF1A JASPAR yes 22215589
chr2 224452605 224452620 HNF1A JASPAR yes 81267224
chr2 224452606 224452616 GSX2 JASPAR yes 22215590
chr2 224452606 224452616 HOXB2 JASPAR yes 22215591
chr2 224452606 224452616 HOXB3 JASPAR yes 22215592
chr2 224452606 224452616 MNX1 JASPAR yes 22215593
chr2 224452606 224452616 POU6F1 JASPAR yes 22215594
chr2 224452606 224452616 GSX2 JASPAR yes 81267225
chr2 224452606 224452616 HOXB2 JASPAR yes 81267226
chr2 224452606 224452616 HOXB3 JASPAR yes 81267227
chr2 224452606 224452616 MNX1 JASPAR yes 81267228
chr2 224452606 224452616 POU6F1 JASPAR yes 81267229
chr2 224452606 224452619 HNF1B JASPAR yes 22215595
chr2 224452606 224452619 HNF1B JASPAR yes 81267230
chr2 224452607 224452615 LMX1A JASPAR yes 22215596
chr2 224452607 224452615 LMX1B JASPAR yes 22215597
chr2 224452607 224452615 NKX6-1 JASPAR yes 22215598
chr2 224452607 224452615 NKX6-2 JASPAR yes 22215599
chr2 224452607 224452615 VAX1 JASPAR yes 22215600
chr2 224452607 224452615 VAX2 JASPAR yes 22215601
chr2 224452607 224452615 VSX1 JASPAR yes 22215602
chr2 224452607 224452615 VSX2 JASPAR yes 22215603
chr2 224452607 224452615 LMX1A JASPAR yes 81267231
chr2 224452607 224452615 LMX1B JASPAR yes 81267232
chr2 224452607 224452615 NKX6-1 JASPAR yes 81267233
chr2 224452607 224452615 NKX6-2 JASPAR yes 81267234
chr2 224452607 224452615 VAX1 JASPAR yes 81267235
chr2 224452607 224452615 VAX2 JASPAR yes 81267236
chr2 224452607 224452615 VSX1 JASPAR yes 81267237
chr2 224452607 224452615 VSX2 JASPAR yes 81267238
chr2 224452612 224452616 YY1 TRANSFAC yes 22215604
chr2 224452612 224452616 YY1 TRANSFAC yes 81267239
chr2 224452624 224452628 H4TF2 TRANSFAC yes 22215605
chr2 224452624 224452628 H4TF2 TRANSFAC yes 81267240
chr2 224452626 224452643 ZNF410 JASPAR yes 22215606
chr2 224452626 224452643 ZNF410 JASPAR yes 81267241
chr2 224452635 224452648 ZBTB18 JASPAR yes 22215607
chr2 224452635 224452648 ZBTB18 JASPAR yes 81267242
chr2 224452641 224452657 ZNF143 JASPAR yes 22215608
chr2 224452641 224452657 ZNF143 JASPAR yes 81267243
chr2 224452667 224452678 DUX4 JASPAR yes 22215609
chr2 224452667 224452678 DUX4 JASPAR yes 81267244
chr2 224452683 224452694 NFE2L2 JASPAR yes 22215610
chr2 224452683 224452694 NFE2L2 JASPAR yes 81267245
chr2 224452698 224452714 POU4F2 JASPAR yes 22215611
chr2 224452698 224452714 POU4F3 JASPAR yes 22215612
chr2 224452698 224452714 POU4F2 JASPAR yes 81267246
chr2 224452698 224452714 POU4F3 JASPAR yes 81267247
chr2 224452700 224452714 POU4F1 JASPAR yes 22215613
chr2 224452700 224452714 POU4F1 JASPAR yes 81267248
chr2 224452700 224452715 HNF1A JASPAR yes 22215614
chr2 224452700 224452715 HNF1A JASPAR yes 81267249
chr2 224452701 224452713 HNF1B JASPAR yes 22215615
chr2 224452701 224452713 HNF1B JASPAR yes 81267250
chr2 224452701 224452714 HNF1B JASPAR yes 22215616
chr2 224452701 224452714 HNF1B JASPAR yes 81267251
chr2 224452701 224452715 POU4F1 JASPAR yes 22215617
chr2 224452701 224452715 POU4F1 JASPAR yes 81267252
chr2 224452701 224452717 POU4F3 JASPAR yes 22215618
chr2 224452701 224452717 POU4F3 JASPAR yes 81267253
chr2 224452715 224452724 POU3F4 JASPAR yes 22215619
chr2 224452715 224452724 POU3F4 JASPAR yes 81267254
chr2 224452735 224452750 FOXA1 JASPAR yes 22215620
chr2 224452735 224452750 FOXA1 JASPAR yes 81267255
chr2 224452737 224452749 FOXC2 JASPAR yes 22215621
chr2 224452737 224452749 FOXC2 JASPAR yes 81267256
chr2 224452737 224452751 FOXF2 JASPAR yes 22215622
chr2 224452737 224452751 FOXF2 JASPAR yes 81267257
chr2 224452738 224452749 FOXB1 JASPAR yes 22215623
chr2 224452738 224452749 FOXC1 JASPAR yes 22215624
chr2 224452738 224452749 FOXB1 JASPAR yes 81267258
chr2 224452738 224452749 FOXC1 JASPAR yes 81267259
chr2 224452739 224452743 YY1 TRANSFAC yes 22215625
chr2 224452739 224452743 YY1 TRANSFAC yes 81267260
chr2 224452755 224452775 RREB1 JASPAR yes 22215626
chr2 224452755 224452775 RREB1 JASPAR yes 81267261
chr2 224452757 224452769 INSM1 JASPAR yes 22215627
chr2 224452757 224452769 INSM1 JASPAR yes 81267262
chr2 224452773 224452787 GLIS3 JASPAR yes 22215628
chr2 224452773 224452787 GLIS3 JASPAR yes 81267263
chr2 224452821 224452837 ZNF143 JASPAR yes 22215629
chr2 224452821 224452837 ZNF143 JASPAR yes 81267264
chr2 224452829 224452844 FOXP1 JASPAR yes 22215630
chr2 224452829 224452844 FOXP1 JASPAR yes 81267265
chr2 224452832 224452846 STAT1 JASPAR yes 22215631
chr2 224452832 224452846 STAT1 JASPAR yes 81267266
chr2 224452832 224452847 STAT2 JASPAR yes 22215632
chr2 224452832 224452847 STAT2 JASPAR yes 81267267
chr2 224452846 224452860 GATA2 JASPAR yes 22215633
chr2 224452846 224452860 GATA2 JASPAR yes 81267268
chr2 224452853 224452864 CDX2 JASPAR yes 22215634
chr2 224452853 224452864 CDX2 JASPAR yes 81267269
SNP sites on vista34887[chr2:224452508-224452858]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 224452515 rs116704728 C T no 6393015
chr2 224452528 rs140331301 G T no 6393016
chr2 224452576 rs539201972 C A,G,T no 6393017
Genes possibly regulated by vista34887[chr2:224452508-224452858]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 224461658 224467221 - SCG2 ENSG00000171951.4 224467221 0.93 0.99 3193 85637
Expression level of Genes
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miRNAs possibly regulated by vista34887[chr2:224452508-224452858]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results