EnhancerDB
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  3. vista34897[chr2:224761528-224761781]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34897[chr2:224761528-224761781]
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Tissue distribution of vista34897
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Transcription factor that possibly regulate vista34897[chr2:224761528-224761781]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 224761426 224761883 NFIC UCSC Txn Factor no Conserved 108435357
chr2 224761511 224761858 RUNX3 UCSC Txn Factor no Conserved 108435358
chr2 224761520 224761828 ATF2 UCSC Txn Factor no Conserved 108435359
chr2 224761538 224761830 PAX5 UCSC Txn Factor no Conserved 108435360
chr2 224761540 224761836 FOXM1 UCSC Txn Factor no Conserved 108435361
chr2 224761565 224761818 BATF UCSC Txn Factor no Conserved 108435362
chr2 224761570 224761820 IRF4 UCSC Txn Factor no Conserved 108435363
chr2 224761521 224761535 RXRB JASPAR yes 22216071
chr2 224761521 224761535 RXRG JASPAR yes 22216072
chr2 224761521 224761535 RXRB JASPAR yes 81298520
chr2 224761521 224761535 RXRG JASPAR yes 81298521
chr2 224761521 224761536 NR2C2 JASPAR yes 22216073
chr2 224761521 224761536 NR2C2 JASPAR yes 81298522
chr2 224761534 224761545 FOXH1 JASPAR yes 22216074
chr2 224761534 224761545 FOXH1 JASPAR yes 81298523
chr2 224761548 224761554 YY1 JASPAR yes 22216075
chr2 224761548 224761554 YY1 JASPAR yes 81298524
chr2 224761554 224761558 YY1 TRANSFAC yes 22216076
chr2 224761554 224761558 YY1 TRANSFAC yes 81298525
chr2 224761615 224761630 HSF1 JASPAR yes 22216077
chr2 224761615 224761630 HSF1 JASPAR yes 81298526
chr2 224761620 224761635 HSF1 JASPAR yes 22216078
chr2 224761620 224761635 HSF1 JASPAR yes 81298527
chr2 224761621 224761638 BCL6B JASPAR yes 22216079
chr2 224761621 224761638 BCL6B JASPAR yes 81298528
chr2 224761669 224761684 TFAP2C JASPAR yes 22216080
chr2 224761669 224761684 TFAP2C JASPAR yes 81298529
chr2 224761670 224761681 TFAP2A JASPAR yes 22216081
chr2 224761670 224761681 TFAP2B JASPAR yes 22216082
chr2 224761670 224761681 TFAP2C JASPAR yes 22216083
chr2 224761670 224761681 TFAP2A JASPAR yes 81298530
chr2 224761670 224761681 TFAP2B JASPAR yes 81298531
chr2 224761670 224761681 TFAP2C JASPAR yes 81298532
chr2 224761671 224761680 TFAP2A JASPAR yes 22216084
chr2 224761671 224761680 TFAP2A JASPAR yes 81298533
chr2 224761674 224761687 NR2F1 JASPAR yes 22216085
chr2 224761674 224761687 NR2F1 JASPAR yes 81298534
chr2 224761678 224761682 ESR1 TRANSFAC yes 22216086
chr2 224761678 224761682 ESR1 TRANSFAC yes 81298535
chr2 224761689 224761700 JUND JASPAR yes 22216087
chr2 224761689 224761700 JUND JASPAR yes 81298536
chr2 224761690 224761699 JDP2 JASPAR yes 22216088
chr2 224761690 224761699 JDP2 JASPAR yes 81298537
chr2 224761690 224761701 JUNB JASPAR yes 22216089
chr2 224761690 224761701 JUNB JASPAR yes 81298538
chr2 224761690 224761704 JUN JASPAR yes 22216090
chr2 224761690 224761704 JUN JASPAR yes 81298539
chr2 224761691 224761702 BATF JASPAR yes 22216091
chr2 224761691 224761702 BATF JASPAR yes 81298540
chr2 224761692 224761703 CDX2 JASPAR yes 22216092
chr2 224761692 224761703 CDX2 JASPAR yes 81298541
chr2 224761692 224761706 FOXF2 JASPAR yes 22216093
chr2 224761692 224761706 FOXF2 JASPAR yes 81298542
chr2 224761693 224761704 HOXA10 JASPAR yes 22216094
chr2 224761693 224761704 HOXC11 JASPAR yes 22216095
chr2 224761693 224761704 HOXC12 JASPAR yes 22216096
chr2 224761693 224761704 HOXD12 JASPAR yes 22216097
chr2 224761693 224761704 HOXA10 JASPAR yes 81298543
chr2 224761693 224761704 HOXC11 JASPAR yes 81298544
chr2 224761693 224761704 HOXC12 JASPAR yes 81298545
chr2 224761693 224761704 HOXD12 JASPAR yes 81298546
chr2 224761693 224761714 IRF1 JASPAR yes 22216098
chr2 224761693 224761714 IRF1 JASPAR yes 81298547
chr2 224761694 224761703 CDX1 JASPAR yes 22216099
chr2 224761694 224761703 CDX1 JASPAR yes 81298548
chr2 224761694 224761704 HOXC10 JASPAR yes 22216100
chr2 224761694 224761704 HOXD11 JASPAR yes 22216101
chr2 224761694 224761704 HOXC10 JASPAR yes 81298549
chr2 224761694 224761704 HOXD11 JASPAR yes 81298550
chr2 224761696 224761710 IRF7 JASPAR yes 22216102
chr2 224761696 224761710 IRF8 JASPAR yes 22216103
chr2 224761696 224761710 IRF7 JASPAR yes 81298551
chr2 224761696 224761710 IRF8 JASPAR yes 81298552
chr2 224761697 224761712 STAT2 JASPAR yes 22216104
chr2 224761697 224761712 STAT2 JASPAR yes 81298553
chr2 224761742 224761757 MEF2A JASPAR yes 22216105
chr2 224761742 224761757 MEF2A JASPAR yes 81298554
chr2 224761743 224761758 MEF2C JASPAR yes 22216106
chr2 224761743 224761758 MEF2C JASPAR yes 81298555
chr2 224761746 224761750 YY1 TRANSFAC yes 22216107
chr2 224761746 224761750 YY1 TRANSFAC yes 81298556
chr2 224761751 224761754 MYB TRANSFAC yes 22216108
chr2 224761751 224761754 MYB TRANSFAC yes 81298557
chr2 224761751 224761766 AR JASPAR yes 22216109
chr2 224761751 224761766 AR JASPAR yes 81298558
chr2 224761761 224761776 FOXP1 JASPAR yes 22216110
chr2 224761761 224761776 FOXP1 JASPAR yes 81298559
chr2 224761761 224761782 ZNF263 JASPAR yes 22216111
chr2 224761761 224761782 ZNF263 JASPAR yes 81298560
chr2 224761762 224761783 ZNF263 JASPAR yes 22216112
chr2 224761762 224761783 ZNF263 JASPAR yes 81298561
chr2 224761775 224761785 MZF1 JASPAR yes 22216113
chr2 224761775 224761785 MZF1 JASPAR yes 81298562
SNP sites on vista34897[chr2:224761528-224761781]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 224761568 rs113018545 G T
ATF2 BATF FOXM1 NFIC PAX5 RUNX3
6396028
chr2 224761606 rs142106112 A G
ATF2 BATF FOXM1 IRF4 NFIC PAX5 RUNX3
6396029
chr2 224761632 rs554630416 G C
ATF2 BATF BCL6B FOXM1 HSF1 IRF4 NFIC PAX5 RUNX3
6396030
Genes possibly regulated by vista34897[chr2:224761528-224761781]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 224616403 224702744 - AP1S3 ENSG00000152056.12 224702744 0.86 1.0 3194 41216
chr2 224720433 224810104 - WDFY1 ENSG00000085449.10 224810104 0.71 1.0 3195 51677
chr2 224822121 224832431 + MRPL44 ENSG00000135900.3 224822121 0.6 0.99 3196 39660
Expression level of Genes
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miRNAs possibly regulated by vista34897[chr2:224761528-224761781]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results