EnhancerDB
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  3. vista34904[chr2:224871549-224871941]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34904[chr2:224871549-224871941]
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Tissue distribution of vista34904
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Transcription factor that possibly regulate vista34904[chr2:224871549-224871941]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 224871548 224871563 NR2C2 JASPAR yes 22216471
chr2 224871548 224871563 NR2C2 JASPAR yes 81304068
chr2 224871556 224871566 GCM2 JASPAR yes 22216472
chr2 224871556 224871566 GCM2 JASPAR yes 81304069
chr2 224871599 224871608 HIC2 JASPAR yes 22216473
chr2 224871599 224871608 HIC2 JASPAR yes 81304070
chr2 224871602 224871606 LFA1 TRANSFAC yes 22216474
chr2 224871602 224871606 LFA1 TRANSFAC yes 81304071
chr2 224871609 224871621 TEAD1 JASPAR yes 22216475
chr2 224871609 224871621 TEAD1 JASPAR yes 81304072
chr2 224871612 224871628 ZNF143 JASPAR yes 22216476
chr2 224871612 224871628 ZNF143 JASPAR yes 81304073
chr2 224871635 224871649 ZIC1 JASPAR yes 22216477
chr2 224871635 224871649 ZIC1 JASPAR yes 81304074
chr2 224871642 224871653 NFE2L2 JASPAR yes 22216478
chr2 224871642 224871653 NFE2L2 JASPAR yes 81304075
chr2 224871644 224871657 SMAD2 JASPAR yes 22216479
chr2 224871644 224871657 SMAD2 JASPAR yes 81304076
chr2 224871647 224871658 TBX20 JASPAR yes 22216480
chr2 224871647 224871658 TBX20 JASPAR yes 81304077
chr2 224871648 224871658 TBX21 JASPAR yes 22216481
chr2 224871648 224871658 TBX21 JASPAR yes 81304078
chr2 224871649 224871657 MGA JASPAR yes 22216482
chr2 224871649 224871657 TBX15 JASPAR yes 22216483
chr2 224871649 224871657 TBX1 JASPAR yes 22216484
chr2 224871649 224871657 TBX4 JASPAR yes 22216485
chr2 224871649 224871657 TBX5 JASPAR yes 22216486
chr2 224871649 224871657 MGA JASPAR yes 81304079
chr2 224871649 224871657 TBX15 JASPAR yes 81304080
chr2 224871649 224871657 TBX1 JASPAR yes 81304081
chr2 224871649 224871657 TBX4 JASPAR yes 81304082
chr2 224871649 224871657 TBX5 JASPAR yes 81304083
chr2 224871671 224871680 THAP1 JASPAR yes 22216487
chr2 224871671 224871680 THAP1 JASPAR yes 81304084
chr2 224871673 224871679 YY1 JASPAR yes 22216488
chr2 224871673 224871679 YY1 JASPAR yes 81304085
chr2 224871697 224871707 ID4 JASPAR yes 22216489
chr2 224871697 224871707 TCF3 JASPAR yes 22216490
chr2 224871697 224871707 TCF4 JASPAR yes 22216491
chr2 224871697 224871707 ID4 JASPAR yes 81304086
chr2 224871697 224871707 TCF3 JASPAR yes 81304087
chr2 224871697 224871707 TCF4 JASPAR yes 81304088
chr2 224871698 224871707 SNAI2 JASPAR yes 22216492
chr2 224871698 224871707 SNAI2 JASPAR yes 81304089
chr2 224871699 224871704 USF2 TRANSFAC yes 22216493
chr2 224871699 224871704 USF2 TRANSFAC yes 81304090
chr2 224871759 224871764 GATA2 JASPAR yes 22216494
chr2 224871759 224871764 GATA2 JASPAR yes 81304091
chr2 224871786 224871790 YY1 TRANSFAC yes 22216495
chr2 224871786 224871790 YY1 TRANSFAC yes 81304092
chr2 224871796 224871806 HOXA13 JASPAR yes 22216496
chr2 224871796 224871806 HOXD13 JASPAR yes 22216497
chr2 224871796 224871806 HOXA13 JASPAR yes 81304093
chr2 224871796 224871806 HOXD13 JASPAR yes 81304094
chr2 224871804 224871821 BCL6B JASPAR yes 22216498
chr2 224871804 224871821 BCL6B JASPAR yes 81304095
chr2 224871821 224871832 FOXB1 JASPAR yes 22216499
chr2 224871821 224871832 FOXB1 JASPAR yes 81304096
chr2 224871821 224871833 POU3F1 JASPAR yes 22216500
chr2 224871821 224871833 POU3F1 JASPAR yes 81304097
chr2 224871821 224871834 POU3F3 JASPAR yes 22216501
chr2 224871821 224871834 POU3F3 JASPAR yes 81304098
chr2 224871824 224871832 FOXL1 JASPAR yes 22216502
chr2 224871824 224871832 FOXL1 JASPAR yes 81304099
chr2 224871844 224871858 FOXF2 JASPAR yes 22216503
chr2 224871844 224871858 FOXF2 JASPAR yes 81304100
chr2 224871859 224871871 PKNOX2 JASPAR yes 22216504
chr2 224871859 224871871 PKNOX2 JASPAR yes 81304101
chr2 224871879 224871895 POU4F2 JASPAR yes 22216505
chr2 224871879 224871895 POU4F2 JASPAR yes 81304102
chr2 224871887 224871894 NKX3-1 JASPAR yes 22216506
chr2 224871887 224871894 NKX3-1 JASPAR yes 81304103
chr2 224871909 224871921 E2F8 JASPAR yes 22216507
chr2 224871909 224871921 E2F8 JASPAR yes 81304104
chr2 224871912 224871917 SP1 TRANSFAC yes 22216508
chr2 224871912 224871917 SP1 TRANSFAC yes 81304105
chr2 224871915 224871926 NFKB1 JASPAR yes 22216509
chr2 224871915 224871926 NFKB1 JASPAR yes 81304106
chr2 224871925 224871943 NR3C1 JASPAR yes 22216510
chr2 224871925 224871943 NR3C1 JASPAR yes 81304107
SNP sites on vista34904[chr2:224871549-224871941]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 224871565 rs1530019 T C
GCM2
6396681
chr2 224871585 rs35047534 C T no 6396682
chr2 224871672 rs372196239 C T
THAP1
6396683
chr2 224871927 rs77670265 C T
NR3C1
6396684
Genes possibly regulated by vista34904[chr2:224871549-224871941]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 224720433 224810104 - WDFY1 ENSG00000085449.10 224810104 0.71 1.0 3195 38555
chr2 224822121 224832431 + MRPL44 ENSG00000135900.3 224822121 0.6 0.99 3196 50572
chr2 224839829 224904036 - SERPINE2 ENSG00000135919.8 224904036 0.97 1.0 3197 67905
Expression level of Genes
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miRNAs possibly regulated by vista34904[chr2:224871549-224871941]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results