EnhancerDB
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  3. vista34918[chr2:225522077-225522236]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34918[chr2:225522077-225522236]
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Tissue distribution of vista34918
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Transcription factor that possibly regulate vista34918[chr2:225522077-225522236]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 225522085 225522089 H4TF2 TRANSFAC yes 22217056
chr2 225522088 225522103 NFYB JASPAR yes 22217057
chr2 225522095 225522099 H1TF2 TRANSFAC yes 22217058
chr2 225522095 225522099 NFE TRANSFAC yes 22217059
chr2 225522095 225522099 SRF TRANSFAC yes 22217060
chr2 225522116 225522126 SREBF1 JASPAR yes 22217061
chr2 225522116 225522126 SREBF2 JASPAR yes 22217062
chr2 225522136 225522146 SREBF2 JASPAR yes 22217063
chr2 225522142 225522157 TFAP2A JASPAR yes 22217064
chr2 225522145 225522157 TFAP2A JASPAR yes 22217065
chr2 225522145 225522157 TFAP2B JASPAR yes 22217066
chr2 225522145 225522157 TFAP2C JASPAR yes 22217067
chr2 225522149 225522158 HIC2 JASPAR yes 22217068
chr2 225522152 225522156 LFA1 TRANSFAC yes 22217069
chr2 225522156 225522166 SREBF1 JASPAR yes 22217070
chr2 225522156 225522166 SREBF2 JASPAR yes 22217071
chr2 225522170 225522181 PHOX2A JASPAR yes 22217072
chr2 225522173 225522183 ALX3 JASPAR yes 22217073
chr2 225522173 225522183 GSX2 JASPAR yes 22217074
chr2 225522173 225522183 LBX2 JASPAR yes 22217075
chr2 225522173 225522183 MIXL1 JASPAR yes 22217076
chr2 225522174 225522178 H1TF2 TRANSFAC yes 22217077
chr2 225522174 225522178 NFE TRANSFAC yes 22217078
chr2 225522174 225522178 SRF TRANSFAC yes 22217079
chr2 225522174 225522182 BARX1 JASPAR yes 22217080
chr2 225522174 225522182 BSX JASPAR yes 22217081
chr2 225522174 225522182 EN1 JASPAR yes 22217082
chr2 225522174 225522182 ISX JASPAR yes 22217083
chr2 225522174 225522182 LHX9 JASPAR yes 22217084
chr2 225522174 225522182 MSX1 JASPAR yes 22217085
chr2 225522174 225522182 MSX2 JASPAR yes 22217086
chr2 225522174 225522182 PRRX1 JASPAR yes 22217087
chr2 225522174 225522182 RAX2 JASPAR yes 22217088
chr2 225522174 225522182 SHOX JASPAR yes 22217089
chr2 225522175 225522186 PHOX2A JASPAR yes 22217090
chr2 225522179 225522192 EOMES JASPAR yes 22217091
chr2 225522181 225522191 TBR1 JASPAR yes 22217092
chr2 225522181 225522192 TBX20 JASPAR yes 22217093
chr2 225522181 225522192 TBX2 JASPAR yes 22217094
chr2 225522182 225522192 TBX21 JASPAR yes 22217095
chr2 225522183 225522191 MGA JASPAR yes 22217096
chr2 225522183 225522191 TBX15 JASPAR yes 22217097
chr2 225522183 225522191 TBX1 JASPAR yes 22217098
chr2 225522183 225522191 TBX4 JASPAR yes 22217099
chr2 225522183 225522191 TBX5 JASPAR yes 22217100
chr2 225522187 225522197 POU6F2 JASPAR yes 22217101
chr2 225522188 225522198 HOXA2 JASPAR yes 22217102
chr2 225522188 225522198 MEOX1 JASPAR yes 22217103
chr2 225522191 225522195 YY1 TRANSFAC yes 22217104
chr2 225522191 225522206 JUND JASPAR yes 22217105
chr2 225522192 225522205 JUN JASPAR yes 22217106
chr2 225522193 225522200 JUN TRANSFAC yes 22217107
chr2 225522202 225522213 HOXC13 JASPAR yes 22217108
chr2 225522203 225522213 HOXA13 JASPAR yes 22217109
chr2 225522203 225522213 HOXB13 JASPAR yes 22217110
chr2 225522203 225522213 HOXD13 JASPAR yes 22217111
chr2 225522205 225522209 TEAD2 TRANSFAC yes 22217112
chr2 225522205 225522210 TBP TRANSFAC yes 22217113
chr2 225522205 225522211 TFIID TRANSFAC yes 22217114
chr2 225522216 225522226 SP1 JASPAR yes 22217115
SNP sites on vista34918[chr2:225522077-225522236]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 225522175 rs80053881 C G
ALX3 BARX1 BSX EN1 GSX2 H1TF2 ISX LBX2 LHX9 MIXL1 MSX1 MSX2 NFE PHOX2A PRRX1 RAX2 SHOX SRF
6400669
chr2 225522182 rs112350631 G A
ALX3 BARX1 BSX EN1 EOMES GSX2 ISX LBX2 LHX9 MIXL1 MSX1 MSX2 PHOX2A PRRX1 RAX2 SHOX TBR1 TBX2 TBX20 TBX21
6400670
chr2 225522183 rs191357368 A G
ALX3 EOMES GSX2 LBX2 MGA MIXL1 PHOX2A TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5
6400671
chr2 225522234 rs528858169 C A,T no 6400672
Genes possibly regulated by vista34918[chr2:225522077-225522236]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 225334867 225450110 - CUL3 ENSG00000036257.8 225450110 0.74 0.99 3199 28033
Expression level of Genes
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miRNAs possibly regulated by vista34918[chr2:225522077-225522236]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results