EnhancerDB
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  3. vista34947[chr2:225895000-225895240]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34947[chr2:225895000-225895240]
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Tissue distribution of vista34947
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Transcription factor that possibly regulate vista34947[chr2:225895000-225895240]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 225894997 225895000 MYB TRANSFAC yes 22218349
chr2 225894997 225895000 MYB TRANSFAC yes 81369401
chr2 225895005 225895008 MYB TRANSFAC yes 22218350
chr2 225895005 225895008 MYB TRANSFAC yes 81369402
chr2 225895025 225895035 HOXA13 JASPAR yes 22218351
chr2 225895025 225895035 HOXA13 JASPAR yes 81369403
chr2 225895027 225895041 E2F7 JASPAR yes 22218352
chr2 225895027 225895041 E2F7 JASPAR yes 81369404
chr2 225895031 225895046 MEF2C JASPAR yes 22218353
chr2 225895031 225895046 MEF2C JASPAR yes 81369405
chr2 225895056 225895069 DUXA JASPAR yes 22218354
chr2 225895056 225895069 DUXA JASPAR yes 81369406
chr2 225895098 225895104 TBP TRANSFAC yes 22218355
chr2 225895098 225895104 TBP TRANSFAC yes 81369407
chr2 225895098 225895109 FOXC1 JASPAR yes 22218356
chr2 225895098 225895109 FOXC1 JASPAR yes 81369408
chr2 225895098 225895110 FOXC2 JASPAR yes 22218357
chr2 225895098 225895110 FOXC2 JASPAR yes 81369409
chr2 225895099 225895114 IRF9 JASPAR yes 22218358
chr2 225895099 225895114 IRF9 JASPAR yes 81369410
chr2 225895121 225895131 SREBF2 JASPAR yes 22218359
chr2 225895121 225895131 TFE3 JASPAR yes 22218360
chr2 225895121 225895131 TFEB JASPAR yes 22218361
chr2 225895121 225895131 TFEC JASPAR yes 22218362
chr2 225895121 225895131 SREBF2 JASPAR yes 81369411
chr2 225895121 225895131 TFE3 JASPAR yes 81369412
chr2 225895121 225895131 TFEB JASPAR yes 81369413
chr2 225895121 225895131 TFEC JASPAR yes 81369414
chr2 225895121 225895132 USF1 JASPAR yes 22218363
chr2 225895121 225895132 USF2 JASPAR yes 22218364
chr2 225895121 225895132 USF1 JASPAR yes 81369415
chr2 225895121 225895132 USF2 JASPAR yes 81369416
chr2 225895131 225895139 FOXO3 JASPAR yes 22218365
chr2 225895131 225895139 FOXO3 JASPAR yes 81369417
chr2 225895157 225895170 SMAD2 JASPAR yes 22218366
chr2 225895157 225895170 SMAD2 JASPAR yes 81369418
chr2 225895171 225895186 HNF4A JASPAR yes 22218367
chr2 225895171 225895186 HNF4A JASPAR yes 81369419
chr2 225895176 225895190 ONECUT1 JASPAR yes 22218368
chr2 225895176 225895190 ONECUT1 JASPAR yes 81369420
chr2 225895179 225895189 CUX1 JASPAR yes 22218369
chr2 225895179 225895189 CUX2 JASPAR yes 22218370
chr2 225895179 225895189 PAX3 JASPAR yes 22218371
chr2 225895179 225895189 PAX7 JASPAR yes 22218372
chr2 225895179 225895189 CUX1 JASPAR yes 81369421
chr2 225895179 225895189 CUX2 JASPAR yes 81369422
chr2 225895179 225895189 PAX3 JASPAR yes 81369423
chr2 225895179 225895189 PAX7 JASPAR yes 81369424
chr2 225895179 225895191 PBX1 JASPAR yes 22218373
chr2 225895179 225895191 PBX1 JASPAR yes 81369425
chr2 225895187 225895191 YY1 TRANSFAC yes 22218374
chr2 225895187 225895191 YY1 TRANSFAC yes 81369426
chr2 225895193 225895207 MTF1 JASPAR yes 22218375
chr2 225895193 225895207 MTF1 JASPAR yes 81369427
chr2 225895212 225895231 CTCF JASPAR yes 22218376
chr2 225895212 225895231 CTCF JASPAR yes 81369428
chr2 225895232 225895235 MYB TRANSFAC yes 22218377
chr2 225895232 225895235 MYB TRANSFAC yes 81369429
SNP sites on vista34947[chr2:225895000-225895240]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 225895186 rs148009619 A G
CUX1 CUX2 HNF4A ONECUT1 PAX3 PAX7 PBX1
6402618
chr2 225895208 rs527684036 G A no 6402619
Genes possibly regulated by vista34947[chr2:225895000-225895240]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 225629807 225907162 - DOCK10 ENSG00000135905.14 225907162 0.89 0.93 3200 88078
Expression level of Genes
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miRNAs possibly regulated by vista34947[chr2:225895000-225895240]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results