EnhancerDB
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  3. vista34988[chr2:227415451-227415852]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34988[chr2:227415451-227415852]
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Tissue distribution of vista34988
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Transcription factor that possibly regulate vista34988[chr2:227415451-227415852]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 227415441 227415459 RARA JASPAR yes 22220612
chr2 227415441 227415459 RARA JASPAR yes 81466853
chr2 227415451 227415467 SOX4 JASPAR yes 22220613
chr2 227415451 227415467 SOX4 JASPAR yes 81466854
chr2 227415452 227415467 SOX21 JASPAR yes 22220614
chr2 227415452 227415467 SOX21 JASPAR yes 81466855
chr2 227415454 227415458 YY1 TRANSFAC yes 22220615
chr2 227415454 227415458 YY1 TRANSFAC yes 81466856
chr2 227415475 227415490 RUNX2 JASPAR yes 22220616
chr2 227415475 227415490 RUNX2 JASPAR yes 81466857
chr2 227415522 227415533 DMRT3 JASPAR yes 22220617
chr2 227415522 227415533 DMRT3 JASPAR yes 81466858
chr2 227415535 227415550 MEF2A JASPAR yes 22220618
chr2 227415535 227415550 MEF2A JASPAR yes 81466859
chr2 227415537 227415549 MEF2A JASPAR yes 22220619
chr2 227415537 227415549 MEF2B JASPAR yes 22220620
chr2 227415537 227415549 MEF2D JASPAR yes 22220621
chr2 227415537 227415549 MEF2A JASPAR yes 81466860
chr2 227415537 227415549 MEF2B JASPAR yes 81466861
chr2 227415537 227415549 MEF2D JASPAR yes 81466862
chr2 227415538 227415548 MEF2A JASPAR yes 22220622
chr2 227415538 227415548 MEF2A JASPAR yes 81466863
chr2 227415545 227415548 MYB TRANSFAC yes 22220623
chr2 227415545 227415548 MYB TRANSFAC yes 81466864
chr2 227415562 227415568 NFE2 TRANSFAC yes 22220624
chr2 227415562 227415568 NFE2 TRANSFAC yes 81466865
chr2 227415565 227415571 SP1 TRANSFAC yes 22220625
chr2 227415565 227415571 SP1 TRANSFAC yes 81466866
chr2 227415587 227415596 HIC2 JASPAR yes 22220626
chr2 227415587 227415596 HIC2 JASPAR yes 81466867
chr2 227415590 227415594 LFA1 TRANSFAC yes 22220627
chr2 227415590 227415594 LFA1 TRANSFAC yes 81466868
chr2 227415593 227415597 YY1 TRANSFAC yes 22220628
chr2 227415593 227415597 YY1 TRANSFAC yes 81466869
chr2 227415599 227415620 IRF1 JASPAR yes 22220629
chr2 227415599 227415620 IRF1 JASPAR yes 81466870
chr2 227415603 227415618 PRDM1 JASPAR yes 22220630
chr2 227415603 227415618 PRDM1 JASPAR yes 81466871
chr2 227415634 227415647 DUXA JASPAR yes 22220631
chr2 227415634 227415647 DUXA JASPAR yes 81466872
chr2 227415642 227415657 MEF2C JASPAR yes 22220632
chr2 227415642 227415657 MEF2C JASPAR yes 81466873
chr2 227415643 227415658 MEF2A JASPAR yes 22220633
chr2 227415643 227415658 MEF2A JASPAR yes 81466874
chr2 227415658 227415668 HMBOX1 JASPAR yes 22220634
chr2 227415658 227415668 HMBOX1 JASPAR yes 81466875
chr2 227415660 227415663 MYB TRANSFAC yes 22220635
chr2 227415660 227415663 MYB TRANSFAC yes 81466876
chr2 227415666 227415671 GATA1 TRANSFAC yes 22220636
chr2 227415666 227415671 GATA1 TRANSFAC yes 81466877
chr2 227415670 227415676 TCF4 TRANSFAC yes 22220637
chr2 227415670 227415676 TCF4 TRANSFAC yes 81466878
chr2 227415678 227415689 FOS JASPAR yes 22220638
chr2 227415678 227415689 FOSL1 JASPAR yes 22220639
chr2 227415678 227415689 JUND JASPAR yes 22220640
chr2 227415678 227415689 FOS JASPAR yes 81466879
chr2 227415678 227415689 FOSL1 JASPAR yes 81466880
chr2 227415678 227415689 JUND JASPAR yes 81466881
chr2 227415679 227415690 FOSL2 JASPAR yes 22220641
chr2 227415679 227415690 JUNB JASPAR yes 22220642
chr2 227415679 227415690 FOSL2 JASPAR yes 81466882
chr2 227415679 227415690 JUNB JASPAR yes 81466883
chr2 227415679 227415693 JUN JASPAR yes 22220643
chr2 227415679 227415693 JUN JASPAR yes 81466884
chr2 227415684 227415695 BATF JASPAR yes 22220644
chr2 227415684 227415695 BATF JASPAR yes 81466885
chr2 227415689 227415693 YY1 TRANSFAC yes 22220645
chr2 227415689 227415693 YY1 TRANSFAC yes 81466886
chr2 227415698 227415709 CDX2 JASPAR yes 22220646
chr2 227415698 227415709 CDX2 JASPAR yes 81466887
chr2 227415699 227415710 HOXA10 JASPAR yes 22220647
chr2 227415699 227415710 HOXC11 JASPAR yes 22220648
chr2 227415699 227415710 HOXC12 JASPAR yes 22220649
chr2 227415699 227415710 HOXC13 JASPAR yes 22220650
chr2 227415699 227415710 HOXD12 JASPAR yes 22220651
chr2 227415699 227415710 HOXA10 JASPAR yes 81466888
chr2 227415699 227415710 HOXC11 JASPAR yes 81466889
chr2 227415699 227415710 HOXC12 JASPAR yes 81466890
chr2 227415699 227415710 HOXC13 JASPAR yes 81466891
chr2 227415699 227415710 HOXD12 JASPAR yes 81466892
chr2 227415700 227415709 CDX1 JASPAR yes 22220652
chr2 227415700 227415709 CDX1 JASPAR yes 81466893
chr2 227415700 227415710 HOXA13 JASPAR yes 22220653
chr2 227415700 227415710 HOXB13 JASPAR yes 22220654
chr2 227415700 227415710 HOXC10 JASPAR yes 22220655
chr2 227415700 227415710 HOXD11 JASPAR yes 22220656
chr2 227415700 227415710 HOXD13 JASPAR yes 22220657
chr2 227415700 227415710 HOXA13 JASPAR yes 81466894
chr2 227415700 227415710 HOXB13 JASPAR yes 81466895
chr2 227415700 227415710 HOXC10 JASPAR yes 81466896
chr2 227415700 227415710 HOXD11 JASPAR yes 81466897
chr2 227415700 227415710 HOXD13 JASPAR yes 81466898
chr2 227415700 227415715 FOXP1 JASPAR yes 22220658
chr2 227415700 227415715 FOXP1 JASPAR yes 81466899
chr2 227415703 227415714 FOXP2 JASPAR yes 22220659
chr2 227415703 227415714 FOXP2 JASPAR yes 81466900
chr2 227415713 227415723 ETV3 JASPAR yes 22220660
chr2 227415713 227415723 ETV3 JASPAR yes 81466901
chr2 227415721 227415733 PKNOX1 JASPAR yes 22220661
chr2 227415721 227415733 PKNOX2 JASPAR yes 22220662
chr2 227415721 227415733 PKNOX1 JASPAR yes 81466902
chr2 227415721 227415733 PKNOX2 JASPAR yes 81466903
chr2 227415727 227415731 NFE TRANSFAC yes 22220663
chr2 227415727 227415731 NFE TRANSFAC yes 81466904
chr2 227415750 227415755 ETS2 TRANSFAC yes 22220664
chr2 227415750 227415755 ETS2 TRANSFAC yes 81466905
chr2 227415763 227415774 E2F6 JASPAR yes 22220665
chr2 227415763 227415774 E2F6 JASPAR yes 81466906
chr2 227415764 227415775 TBX20 JASPAR yes 22220666
chr2 227415764 227415775 TBX20 JASPAR yes 81466907
chr2 227415765 227415775 TBX21 JASPAR yes 22220667
chr2 227415765 227415775 TBX21 JASPAR yes 81466908
chr2 227415766 227415774 TBX15 JASPAR yes 22220668
chr2 227415766 227415774 TBX15 JASPAR yes 81466909
chr2 227415786 227415792 TCF4 TRANSFAC yes 22220669
chr2 227415786 227415792 TCF4 TRANSFAC yes 81466910
chr2 227415789 227415799 NFIA JASPAR yes 22220670
chr2 227415789 227415799 NFIA JASPAR yes 81466911
chr2 227415790 227415799 NFIX JASPAR yes 22220671
chr2 227415790 227415799 NFIX JASPAR yes 81466912
chr2 227415791 227415797 NFIC JASPAR yes 22220672
chr2 227415791 227415797 NFIC JASPAR yes 81466913
chr2 227415821 227415826 ETS2 TRANSFAC yes 22220673
chr2 227415821 227415826 ETS2 TRANSFAC yes 81466914
chr2 227415826 227415841 RFX5 JASPAR yes 22220674
chr2 227415826 227415841 RFX5 JASPAR yes 81466915
chr2 227415827 227415831 NFE TRANSFAC yes 22220675
chr2 227415827 227415831 NFE TRANSFAC yes 81466916
chr2 227415839 227415850 EBF1 JASPAR yes 22220676
chr2 227415839 227415850 EBF1 JASPAR yes 81466917
SNP sites on vista34988[chr2:227415451-227415852]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 227415590 rs188442799 C T
HIC2 LFA1
6410164
chr2 227415623 rs181593004 C T no 6410165
chr2 227415826 rs565032075 T G
ETS2 RFX5
6410166
chr2 227415832 rs142717044 C T
RFX5
6410167
chr2 227415833 rs185807144 G A
RFX5
6410168
Genes possibly regulated by vista34988[chr2:227415451-227415852]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista34988[chr2:227415451-227415852]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results