EnhancerDB
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  3. vista34989[chr2:227427883-227428152]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34989[chr2:227427883-227428152]
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Tissue distribution of vista34989
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Transcription factor that possibly regulate vista34989[chr2:227427883-227428152]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 227427875 227427887 MEF2A JASPAR yes 22220677
chr2 227427875 227427887 MEF2A JASPAR yes 81468792
chr2 227427877 227427887 ALX3 JASPAR yes 22220678
chr2 227427877 227427887 GSX2 JASPAR yes 22220679
chr2 227427877 227427887 MNX1 JASPAR yes 22220680
chr2 227427877 227427887 ALX3 JASPAR yes 81468794
chr2 227427877 227427887 GSX2 JASPAR yes 81468795
chr2 227427877 227427887 MNX1 JASPAR yes 81468796
chr2 227427877 227427888 HOXA10 JASPAR yes 22220681
chr2 227427877 227427888 HOXA10 JASPAR yes 81468797
chr2 227427878 227427886 LMX1A JASPAR yes 22220682
chr2 227427878 227427886 LMX1B JASPAR yes 22220683
chr2 227427878 227427886 NKX6-1 JASPAR yes 22220684
chr2 227427878 227427886 NKX6-2 JASPAR yes 22220685
chr2 227427878 227427886 VAX1 JASPAR yes 22220686
chr2 227427878 227427886 VAX2 JASPAR yes 22220687
chr2 227427878 227427886 VSX1 JASPAR yes 22220688
chr2 227427878 227427886 VSX2 JASPAR yes 22220689
chr2 227427878 227427886 LMX1A JASPAR yes 81468798
chr2 227427878 227427886 LMX1B JASPAR yes 81468799
chr2 227427878 227427886 NKX6-1 JASPAR yes 81468800
chr2 227427878 227427886 NKX6-2 JASPAR yes 81468801
chr2 227427878 227427886 VAX1 JASPAR yes 81468802
chr2 227427878 227427886 VAX2 JASPAR yes 81468803
chr2 227427878 227427886 VSX1 JASPAR yes 81468804
chr2 227427878 227427886 VSX2 JASPAR yes 81468805
chr2 227427879 227427900 IRF1 JASPAR yes 22220690
chr2 227427879 227427900 IRF1 JASPAR yes 81468806
chr2 227427880 227427901 IRF1 JASPAR yes 22220691
chr2 227427880 227427901 IRF1 JASPAR yes 81468807
chr2 227427881 227427896 FOXP1 JASPAR yes 22220692
chr2 227427881 227427896 FOXP1 JASPAR yes 81468808
chr2 227427882 227427897 FOXP1 JASPAR yes 22220693
chr2 227427882 227427897 FOXP1 JASPAR yes 81468809
chr2 227427883 227427889 TBP TRANSFAC yes 22220694
chr2 227427883 227427889 TBP TRANSFAC yes 81468810
chr2 227427883 227427898 FOXP1 JASPAR yes 22220695
chr2 227427883 227427898 FOXP1 JASPAR yes 81468811
chr2 227427883 227427904 IRF1 JASPAR yes 22220696
chr2 227427883 227427904 IRF1 JASPAR yes 81468812
chr2 227427884 227427899 FOXP1 JASPAR yes 22220697
chr2 227427884 227427899 FOXP1 JASPAR yes 81468813
chr2 227427884 227427905 IRF1 JASPAR yes 22220698
chr2 227427884 227427905 IRF1 JASPAR yes 81468814
chr2 227427885 227427900 FOXP1 JASPAR yes 22220699
chr2 227427885 227427900 FOXP1 JASPAR yes 81468815
chr2 227427885 227427906 IRF1 JASPAR yes 22220700
chr2 227427885 227427906 IRF1 JASPAR yes 81468816
chr2 227427886 227427901 FOXP1 JASPAR yes 22220701
chr2 227427886 227427901 FOXP1 JASPAR yes 81468817
chr2 227427886 227427907 IRF1 JASPAR yes 22220702
chr2 227427886 227427907 IRF1 JASPAR yes 81468818
chr2 227427887 227427902 FOXP1 JASPAR yes 22220703
chr2 227427887 227427902 FOXP1 JASPAR yes 81468819
chr2 227427889 227427904 FOXP1 JASPAR yes 22220704
chr2 227427889 227427904 FOXP1 JASPAR yes 81468820
chr2 227427889 227427910 IRF1 JASPAR yes 22220705
chr2 227427889 227427910 IRF1 JASPAR yes 81468821
chr2 227427893 227427907 SPI1 JASPAR yes 22220706
chr2 227427893 227427907 SPI1 JASPAR yes 81468822
chr2 227427907 227427914 JUN TRANSFAC yes 22220707
chr2 227427907 227427914 JUN TRANSFAC yes 81468823
chr2 227427921 227427941 TP53 JASPAR yes 22220708
chr2 227427921 227427941 TP53 JASPAR yes 81468824
chr2 227427933 227427937 LFA1 TRANSFAC yes 22220709
chr2 227427933 227427937 LFA1 TRANSFAC yes 81468825
chr2 227427951 227427955 NFE TRANSFAC yes 22220710
chr2 227427951 227427955 NFE TRANSFAC yes 81468826
chr2 227427972 227427984 MYBL1 JASPAR yes 22220711
chr2 227427972 227427984 MYBL1 JASPAR yes 81468827
chr2 227427977 227427980 MYB TRANSFAC yes 22220712
chr2 227427977 227427980 MYB TRANSFAC yes 81468828
chr2 227428050 227428055 ETS2 TRANSFAC yes 22220713
chr2 227428050 227428055 ETS2 TRANSFAC yes 81468829
chr2 227428058 227428075 ESR1 JASPAR yes 22220714
chr2 227428058 227428075 ESR1 JASPAR yes 81468830
chr2 227428067 227428077 SREBF1 JASPAR yes 22220715
chr2 227428067 227428077 SREBF1 JASPAR yes 81468831
chr2 227428084 227428089 MYC TRANSFAC yes 22220716
chr2 227428084 227428089 MYC TRANSFAC yes 81468832
chr2 227428118 227428122 NFE TRANSFAC yes 22220717
chr2 227428118 227428122 NFE TRANSFAC yes 81468833
chr2 227428118 227428123 GATA1 TRANSFAC yes 22220718
chr2 227428118 227428123 GATA1 TRANSFAC yes 81468834
chr2 227428118 227428124 GATA3 JASPAR yes 22220719
chr2 227428118 227428124 GATA3 JASPAR yes 81468835
chr2 227428122 227428137 FOXP1 JASPAR yes 22220720
chr2 227428122 227428137 FOXP1 JASPAR yes 81468836
chr2 227428123 227428138 FOXP1 JASPAR yes 22220721
chr2 227428123 227428138 FOXP1 JASPAR yes 81468837
chr2 227428124 227428139 FOXP1 JASPAR yes 22220722
chr2 227428124 227428139 FOXP1 JASPAR yes 81468838
chr2 227428124 227428145 IRF1 JASPAR yes 22220723
chr2 227428124 227428145 IRF1 JASPAR yes 81468839
chr2 227428125 227428140 FOXP1 JASPAR yes 22220724
chr2 227428125 227428140 FOXP1 JASPAR yes 81468840
chr2 227428125 227428146 IRF1 JASPAR yes 22220725
chr2 227428125 227428146 IRF1 JASPAR yes 81468841
chr2 227428126 227428141 FOXP1 JASPAR yes 22220726
chr2 227428126 227428141 FOXP1 JASPAR yes 81468842
chr2 227428126 227428147 IRF1 JASPAR yes 22220727
chr2 227428126 227428147 IRF1 JASPAR yes 81468843
chr2 227428127 227428142 FOXP1 JASPAR yes 22220728
chr2 227428127 227428142 FOXP1 JASPAR yes 81468844
chr2 227428129 227428144 FOXP1 JASPAR yes 22220729
chr2 227428129 227428144 FOXP1 JASPAR yes 81468845
chr2 227428130 227428151 IRF1 JASPAR yes 22220730
chr2 227428130 227428151 IRF1 JASPAR yes 81468846
chr2 227428131 227428146 FOXP1 JASPAR yes 22220731
chr2 227428131 227428146 FOXP1 JASPAR yes 81468847
chr2 227428131 227428152 IRF1 JASPAR yes 22220732
chr2 227428131 227428152 IRF1 JASPAR yes 81468848
chr2 227428132 227428153 IRF1 JASPAR yes 22220733
chr2 227428132 227428153 IRF1 JASPAR yes 81468849
chr2 227428136 227428151 PRDM1 JASPAR yes 22220734
chr2 227428136 227428151 PRDM1 JASPAR yes 81468850
chr2 227428136 227428157 IRF1 JASPAR yes 22220735
chr2 227428136 227428157 IRF1 JASPAR yes 81468851
chr2 227428137 227428158 IRF1 JASPAR yes 22220736
chr2 227428137 227428158 IRF1 JASPAR yes 81468852
chr2 227428138 227428159 IRF1 JASPAR yes 22220737
chr2 227428138 227428159 IRF1 JASPAR yes 81468853
chr2 227428140 227428154 SPIC JASPAR yes 22220738
chr2 227428140 227428154 SPIC JASPAR yes 81468854
chr2 227428143 227428158 FOXP1 JASPAR yes 22220739
chr2 227428143 227428158 FOXP1 JASPAR yes 81468855
chr2 227428145 227428150 ETS2 TRANSFAC yes 22220740
chr2 227428145 227428150 ETS2 TRANSFAC yes 81468856
SNP sites on vista34989[chr2:227427883-227428152]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 227427905 rs530779140 G T
IRF1 SPI1
6410294
chr2 227427998 rs72975436 C T no 6410295
chr2 227428125 rs573192004 CA C
FOXP1 IRF1
6410296
Genes possibly regulated by vista34989[chr2:227427883-227428152]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista34989[chr2:227427883-227428152]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results