EnhancerDB
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  3. vista350[chr1:10960432-10960567]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista350[chr1:10960432-10960567]
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Tissue distribution of vista350
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Transcription factor that possibly regulate vista350[chr1:10960432-10960567]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10960471 10960480 TFAP2A JASPAR yes 26758653
chr1 10960471 10960480 TFAP2A JASPAR yes 118229761
chr1 10960475 10960480 SP1 TRANSFAC yes 26758654
chr1 10960475 10960480 SP1 TRANSFAC yes 118229762
chr1 10960479 10960493 PLAG1 JASPAR yes 26758655
chr1 10960479 10960493 PLAG1 JASPAR yes 118229763
chr1 10960489 10960509 RREB1 JASPAR yes 26758656
chr1 10960489 10960509 RREB1 JASPAR yes 118229764
chr1 10960501 10960507 SP1 TRANSFAC yes 26758657
chr1 10960501 10960507 SP1 TRANSFAC yes 118229765
chr1 10960501 10960511 SP1 JASPAR yes 26758658
chr1 10960501 10960511 SP1 JASPAR yes 118229766
chr1 10960503 10960508 SP1 TRANSFAC yes 26758659
chr1 10960503 10960508 SP1 TRANSFAC yes 118229767
chr1 10960515 10960520 SP1 TRANSFAC yes 26758660
chr1 10960515 10960520 SP1 TRANSFAC yes 118229768
chr1 10960515 10960521 SP1 TRANSFAC yes 26758661
chr1 10960515 10960521 SP1 TRANSFAC yes 118229769
chr1 10960515 10960522 SP1 TRANSFAC yes 26758662
chr1 10960515 10960522 SP1 TRANSFAC yes 118229770
chr1 10960516 10960528 INSM1 JASPAR yes 26758663
chr1 10960516 10960528 INSM1 JASPAR yes 118229771
chr1 10960523 10960529 NFIC JASPAR yes 26758664
chr1 10960523 10960529 NFIC JASPAR yes 118229772
chr1 10960525 10960529 H1TF2 TRANSFAC yes 26758665
chr1 10960525 10960529 NFE TRANSFAC yes 26758666
chr1 10960525 10960529 SRF TRANSFAC yes 26758667
chr1 10960525 10960529 H1TF2 TRANSFAC yes 118229773
chr1 10960525 10960529 NFE TRANSFAC yes 118229774
chr1 10960525 10960529 SRF TRANSFAC yes 118229775
chr1 10960529 10960532 MYB TRANSFAC yes 26758668
chr1 10960529 10960532 MYB TRANSFAC yes 118229776
chr1 10960545 10960549 NFE TRANSFAC yes 26758669
chr1 10960545 10960549 NFE TRANSFAC yes 118229777
SNP sites on vista350[chr1:10960432-10960567]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10960454 rs563448077 G A no 76517
chr1 10960484 rs56911167 A G
PLAG1
76518
chr1 10960506 rs528066415 G A,C,T
RREB1 SP1
76519
Genes possibly regulated by vista350[chr1:10960432-10960567]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 11006528 11042094 - C1orf127 ENSG00000175262.10 11042094 0.96 1.0 142 18473
Expression level of Genes
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miRNAs possibly regulated by vista350[chr1:10960432-10960567]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results