EnhancerDB
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  3. vista35004[chr2:227665142-227665696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35004[chr2:227665142-227665696]
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Tissue distribution of vista35004
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Transcription factor that possibly regulate vista35004[chr2:227665142-227665696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 227664947 227666422 POLR2A UCSC Txn Factor no Conserved 108435481
chr2 227664947 227666422 POLR2A UCSC Txn Factor no Conserved 108435482
chr2 227665170 227665610 FOXA1 UCSC Txn Factor no Conserved 108435483
chr2 227665179 227665735 EP300 UCSC Txn Factor no Conserved 108435484
chr2 227665204 227665686 NFIC UCSC Txn Factor no Conserved 108435485
chr2 227665215 227665606 FOXA2 UCSC Txn Factor no Conserved 108435486
chr2 227665222 227665973 MYBL2 UCSC Txn Factor no Conserved 108435487
chr2 227665222 227665973 MYBL2 UCSC Txn Factor no Conserved 108435488
chr2 227665231 227665581 RXRA UCSC Txn Factor no Conserved 108435489
chr2 227665277 227665573 HNF4A UCSC Txn Factor no Conserved 108435490
chr2 227665281 227665558 HDAC2 UCSC Txn Factor no Conserved 108435491
chr2 227665295 227665590 SP1 UCSC Txn Factor no Conserved 108435492
chr2 227665144 227665155 ESRRA JASPAR yes 22221328
chr2 227665148 227665152 LFA1 TRANSFAC yes 22221329
chr2 227665161 227665165 LFA1 TRANSFAC yes 22221330
chr2 227665171 227665175 ESR1 TRANSFAC yes 22221331
chr2 227665192 227665209 BCL6B JASPAR yes 22221332
chr2 227665196 227665202 MZF1 JASPAR yes 22221333
chr2 227665196 227665209 ELF1 JASPAR yes 22221334
chr2 227665197 227665209 EHF JASPAR yes 22221335
chr2 227665197 227665209 ELF1 JASPAR yes 22221336
chr2 227665197 227665209 ELF4 JASPAR yes 22221337
chr2 227665198 227665209 ELF5 JASPAR yes 22221338
chr2 227665199 227665206 ETS1 TRANSFAC yes 22221339
chr2 227665199 227665209 ETV6 JASPAR yes 22221340
chr2 227665199 227665209 GABPA JASPAR yes 22221341
chr2 227665199 227665210 ELK4 JASPAR yes 22221342
chr2 227665199 227665210 FLI1 JASPAR yes 22221343
chr2 227665200 227665208 EHF JASPAR yes 22221344
chr2 227665200 227665208 FEV JASPAR yes 22221345
chr2 227665201 227665208 SPI1 JASPAR yes 22221346
chr2 227665224 227665235 FOXH1 JASPAR yes 22221347
chr2 227665230 227665248 MAFF JASPAR yes 22221348
chr2 227665232 227665247 MAFK JASPAR yes 22221349
chr2 227665251 227665265 IRF7 JASPAR yes 22221350
chr2 227665254 227665266 POU2F1 JASPAR yes 22221351
chr2 227665254 227665267 POU3F3 JASPAR yes 22221352
chr2 227665255 227665266 FOXA1 JASPAR yes 22221353
chr2 227665255 227665267 POU3F1 JASPAR yes 22221354
chr2 227665255 227665267 POU3F2 JASPAR yes 22221355
chr2 227665255 227665268 POU2F2 JASPAR yes 22221356
chr2 227665255 227665270 FOXA1 JASPAR yes 22221357
chr2 227665256 227665265 POU3F4 JASPAR yes 22221358
chr2 227665256 227665265 POU5F1B JASPAR yes 22221359
chr2 227665256 227665267 FOXB1 JASPAR yes 22221360
chr2 227665256 227665267 FOXC1 JASPAR yes 22221361
chr2 227665256 227665268 FOXC2 JASPAR yes 22221362
chr2 227665264 227665285 ZNF263 JASPAR yes 22221363
chr2 227665267 227665288 ZNF263 JASPAR yes 22221364
chr2 227665273 227665294 ZNF263 JASPAR yes 22221365
chr2 227665302 227665322 PPARG JASPAR yes 22221366
chr2 227665308 227665321 EOMES JASPAR yes 22221367
chr2 227665310 227665320 TBR1 JASPAR yes 22221368
chr2 227665310 227665321 TBX20 JASPAR yes 22221369
chr2 227665310 227665321 TBX2 JASPAR yes 22221370
chr2 227665311 227665321 TBX21 JASPAR yes 22221371
chr2 227665312 227665320 MGA JASPAR yes 22221372
chr2 227665312 227665320 TBX15 JASPAR yes 22221373
chr2 227665312 227665320 TBX1 JASPAR yes 22221374
chr2 227665312 227665320 TBX4 JASPAR yes 22221375
chr2 227665312 227665320 TBX5 JASPAR yes 22221376
chr2 227665321 227665333 TFAP2A JASPAR yes 22221377
chr2 227665326 227665340 PLAG1 JASPAR yes 22221378
chr2 227665327 227665348 ZNF263 JASPAR yes 22221379
chr2 227665328 227665332 LFA1 TRANSFAC yes 22221380
chr2 227665329 227665341 INSM1 JASPAR yes 22221381
chr2 227665334 227665343 SP1 TRANSFAC yes 22221382
chr2 227665334 227665344 SP1 JASPAR yes 22221383
chr2 227665334 227665355 ZNF263 JASPAR yes 22221384
chr2 227665335 227665344 SP1 TRANSFAC yes 22221385
chr2 227665336 227665342 MAZ TRANSFAC yes 22221386
chr2 227665337 227665347 MZF1 JASPAR yes 22221387
chr2 227665352 227665356 H4TF2 TRANSFAC yes 22221388
chr2 227665356 227665364 GATA5 JASPAR yes 22221389
chr2 227665375 227665379 NFE TRANSFAC yes 22221390
chr2 227665376 227665381 GATA2 JASPAR yes 22221391
chr2 227665390 227665400 MSC JASPAR yes 22221392
chr2 227665436 227665447 FOXA1 JASPAR yes 22221393
chr2 227665436 227665451 FOXA1 JASPAR yes 22221394
chr2 227665437 227665448 FOXB1 JASPAR yes 22221395
chr2 227665437 227665448 FOXC1 JASPAR yes 22221396
chr2 227665440 227665452 SRF JASPAR yes 22221397
chr2 227665454 227665466 FOXI1 JASPAR yes 22221398
chr2 227665463 227665473 TBR1 JASPAR yes 22221399
chr2 227665467 227665487 RREB1 JASPAR yes 22221400
chr2 227665486 227665491 MYB TRANSFAC yes 22221401
chr2 227665498 227665502 TEAD2 TRANSFAC yes 22221402
chr2 227665506 227665517 ESRRB JASPAR yes 22221403
chr2 227665508 227665511 MYB TRANSFAC yes 22221404
chr2 227665508 227665516 SF1 TRANSFAC yes 22221405
chr2 227665523 227665528 GATA2 JASPAR yes 22221406
chr2 227665526 227665529 MYB TRANSFAC yes 22221407
chr2 227665530 227665545 FOXP1 JASPAR yes 22221408
chr2 227665533 227665544 FOXP2 JASPAR yes 22221409
chr2 227665568 227665580 YY1 JASPAR yes 22221410
chr2 227665573 227665587 BATF3 JASPAR yes 22221411
chr2 227665611 227665620 NKX2-8 JASPAR yes 22221412
chr2 227665628 227665638 RORA JASPAR yes 22221413
chr2 227665629 227665640 ESRRA JASPAR yes 22221414
chr2 227665633 227665637 ESR1 TRANSFAC yes 22221415
chr2 227665640 227665649 RUNX2 JASPAR yes 22221416
chr2 227665653 227665668 RUNX2 JASPAR yes 22221417
chr2 227665654 227665660 MZF1 JASPAR yes 22221418
chr2 227665656 227665676 RREB1 JASPAR yes 22221419
chr2 227665670 227665681 EBF1 JASPAR yes 22221420
chr2 227665671 227665677 MZF1 JASPAR yes 22221421
chr2 227665679 227665694 FOXP1 JASPAR yes 22221422
chr2 227665686 227665690 YY1 TRANSFAC yes 22221423
SNP sites on vista35004[chr2:227665142-227665696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 227665382 rs147645131 G C
EP300 FOXA1 FOXA2 HDAC2 HNF4A MYBL2 NFIC POLR2A RXRA SP1
6412806
chr2 227665385 rs572161652 A G
EP300 FOXA1 FOXA2 HDAC2 HNF4A MYBL2 NFIC POLR2A RXRA SP1
6412807
chr2 227665481 rs186384056 A G
EP300 FOXA1 FOXA2 HDAC2 HNF4A MYBL2 NFIC POLR2A RREB1 RXRA SP1
6412808
chr2 227665663 rs540859988 A G
EP300 MYBL2 NFIC POLR2A RREB1 RUNX2
6412809
chr2 227665678 rs6436635 G A,C
EBF1 EP300 MYBL2 NFIC POLR2A
6412810
Genes possibly regulated by vista35004[chr2:227665142-227665696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 227596033 227664475 - IRS1 ENSG00000169047.5 227664475 0.78 1.0 3202 99333
chr2 227700297 227863931 + RHBDD1 ENSG00000144468.12 227700297 0.74 1.0 3203 65399
Expression level of Genes
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miRNAs possibly regulated by vista35004[chr2:227665142-227665696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results