EnhancerDB
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  3. vista35005[chr2:227665859-227666449]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35005[chr2:227665859-227666449]
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Tissue distribution of vista35005
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Transcription factor that possibly regulate vista35005[chr2:227665859-227666449]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 227664947 227666422 POLR2A UCSC Txn Factor no Conserved 108435481
chr2 227664947 227666422 POLR2A UCSC Txn Factor no Conserved 108435482
chr2 227665222 227665973 MYBL2 UCSC Txn Factor no Conserved 108435487
chr2 227665222 227665973 MYBL2 UCSC Txn Factor no Conserved 108435488
chr2 227665913 227666109 PBX3 UCSC Txn Factor no Conserved 108435493
chr2 227665872 227665881 HIC2 JASPAR yes 22221424
chr2 227665875 227665879 LFA1 TRANSFAC yes 22221425
chr2 227665895 227665904 HIC2 JASPAR yes 22221426
chr2 227665897 227665908 NRF1 JASPAR yes 22221427
chr2 227665898 227665902 LFA1 TRANSFAC yes 22221428
chr2 227665905 227665923 ESR1 JASPAR yes 22221429
chr2 227665922 227665927 SP1 TRANSFAC yes 22221430
chr2 227665927 227665936 TFAP2A JASPAR yes 22221431
chr2 227665950 227665954 H1TF2 TRANSFAC yes 22221432
chr2 227665950 227665954 NFE TRANSFAC yes 22221433
chr2 227665950 227665954 SRF TRANSFAC yes 22221434
chr2 227665964 227665969 SP1 TRANSFAC yes 22221435
chr2 227665987 227666005 NFYA JASPAR yes 22221436
chr2 227665990 227666006 NFYA JASPAR yes 22221437
chr2 227665993 227666008 NFYB JASPAR yes 22221438
chr2 227665995 227666000 NFY TRANSFAC yes 22221439
chr2 227665999 227666004 SP1 TRANSFAC yes 22221440
chr2 227666004 227666010 YY1 JASPAR yes 22221441
chr2 227666034 227666055 ZNF263 JASPAR yes 22221442
chr2 227666035 227666056 ZNF263 JASPAR yes 22221443
chr2 227666036 227666041 ETS2 TRANSFAC yes 22221444
chr2 227666038 227666059 ZNF263 JASPAR yes 22221445
chr2 227666041 227666046 SP1 TRANSFAC yes 22221446
chr2 227666045 227666063 RARA JASPAR yes 22221447
chr2 227666077 227666083 TCF4 TRANSFAC yes 22221448
chr2 227666083 227666098 FOXP1 JASPAR yes 22221449
chr2 227666084 227666095 HOXC12 JASPAR yes 22221450
chr2 227666085 227666095 HOXC10 JASPAR yes 22221451
chr2 227666085 227666095 HOXD11 JASPAR yes 22221452
chr2 227666086 227666107 IRF1 JASPAR yes 22221453
chr2 227666087 227666102 FOXP1 JASPAR yes 22221454
chr2 227666088 227666109 IRF1 JASPAR yes 22221455
chr2 227666089 227666095 TBP TRANSFAC yes 22221456
chr2 227666102 227666123 ZNF263 JASPAR yes 22221457
chr2 227666105 227666126 ZNF263 JASPAR yes 22221458
chr2 227666108 227666129 ZNF263 JASPAR yes 22221459
chr2 227666111 227666132 ZNF263 JASPAR yes 22221460
chr2 227666135 227666147 E2F1 JASPAR yes 22221461
chr2 227666158 227666171 POU3F3 JASPAR yes 22221462
chr2 227666158 227666172 POU1F1 JASPAR yes 22221463
chr2 227666159 227666171 POU3F1 JASPAR yes 22221464
chr2 227666159 227666171 POU3F2 JASPAR yes 22221465
chr2 227666168 227666178 MZF1 JASPAR yes 22221466
chr2 227666175 227666180 NFY TRANSFAC yes 22221467
chr2 227666179 227666183 LFA1 TRANSFAC yes 22221468
chr2 227666192 227666203 NFKB1 JASPAR yes 22221469
chr2 227666200 227666206 MZF1 JASPAR yes 22221470
chr2 227666219 227666240 ZNF263 JASPAR yes 22221471
chr2 227666230 227666251 ZNF263 JASPAR yes 22221472
chr2 227666237 227666248 FLI1 JASPAR yes 22221473
chr2 227666238 227666248 GABPA JASPAR yes 22221474
chr2 227666238 227666251 ELF1 JASPAR yes 22221475
chr2 227666239 227666247 EHF JASPAR yes 22221476
chr2 227666248 227666267 RFX2 JASPAR yes 22221477
chr2 227666279 227666294 HNF1A JASPAR yes 22221478
chr2 227666280 227666293 HNF1B JASPAR yes 22221479
chr2 227666287 227666291 TEAD2 TRANSFAC yes 22221480
chr2 227666293 227666308 FOXA1 JASPAR yes 22221481
chr2 227666296 227666309 ZBTB18 JASPAR yes 22221482
chr2 227666297 227666312 SCRT1 JASPAR yes 22221483
chr2 227666298 227666308 CLOCK JASPAR yes 22221484
chr2 227666310 227666315 MYB TRANSFAC yes 22221485
chr2 227666316 227666337 ZNF263 JASPAR yes 22221486
chr2 227666330 227666337 SPIB JASPAR yes 22221487
chr2 227666348 227666359 GCM1 JASPAR yes 22221488
chr2 227666349 227666369 PPARG JASPAR yes 22221489
chr2 227666350 227666359 HIC2 JASPAR yes 22221490
chr2 227666353 227666357 LFA1 TRANSFAC yes 22221491
chr2 227666355 227666367 HES5 JASPAR yes 22221492
chr2 227666356 227666366 BHLHE40 JASPAR yes 22221493
chr2 227666356 227666366 BHLHE41 JASPAR yes 22221494
chr2 227666356 227666366 CLOCK JASPAR yes 22221495
chr2 227666356 227666366 HEY1 JASPAR yes 22221496
chr2 227666356 227666366 HEY2 JASPAR yes 22221497
chr2 227666356 227666366 MAX JASPAR yes 22221498
chr2 227666356 227666366 MNT JASPAR yes 22221499
chr2 227666356 227666366 TFE3 JASPAR yes 22221500
chr2 227666357 227666367 MAX JASPAR yes 22221501
chr2 227666358 227666363 MYC TRANSFAC yes 22221502
chr2 227666358 227666363 USF1 TRANSFAC yes 22221503
chr2 227666358 227666363 USF2 TRANSFAC yes 22221504
chr2 227666361 227666370 HIC2 JASPAR yes 22221505
chr2 227666376 227666391 MEF2A JASPAR yes 22221506
chr2 227666377 227666392 MEF2A JASPAR yes 22221507
chr2 227666378 227666390 MEF2A JASPAR yes 22221508
chr2 227666378 227666390 MEF2B JASPAR yes 22221509
chr2 227666378 227666390 MEF2D JASPAR yes 22221510
chr2 227666379 227666389 MEF2A JASPAR yes 22221511
chr2 227666393 227666397 YY1 TRANSFAC yes 22221512
chr2 227666393 227666414 IRF1 JASPAR yes 22221513
chr2 227666397 227666412 STAT2 JASPAR yes 22221514
chr2 227666411 227666416 SP1 TRANSFAC yes 22221515
chr2 227666434 227666446 INSM1 JASPAR yes 22221516
SNP sites on vista35005[chr2:227665859-227666449]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 227665921 rs557847100 C A,G
ESR1 MYBL2 PBX3 POLR2A
6412814
chr2 227665967 rs373826465 G T
MYBL2 PBX3 POLR2A SP1
6412815
chr2 227666035 rs144595922 G C
PBX3 POLR2A ZNF263
6412816
chr2 227666299 rs36216459 T C
CLOCK FOXA1 POLR2A SCRT1 ZBTB18
6412817
chr2 227666431 rs187723591 C A no 6412818
chr2 227666444 rs75249043 G A
INSM1
6412819
Genes possibly regulated by vista35005[chr2:227665859-227666449]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 227596033 227664475 - IRS1 ENSG00000169047.5 227664475 0.78 1.0 3202 98616
chr2 227700297 227863931 + RHBDD1 ENSG00000144468.12 227700297 0.74 1.0 3203 66152
Expression level of Genes
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miRNAs possibly regulated by vista35005[chr2:227665859-227666449]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results