EnhancerDB
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  3. vista35006[chr2:227666599-227666819]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35006[chr2:227666599-227666819]
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Tissue distribution of vista35006
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Transcription factor that possibly regulate vista35006[chr2:227666599-227666819]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 227666615 227666630 LEF1 JASPAR yes 22221517
chr2 227666625 227666633 FOXO3 JASPAR yes 22221518
chr2 227666636 227666648 INSM1 JASPAR yes 22221519
chr2 227666638 227666648 GCM2 JASPAR yes 22221520
chr2 227666638 227666649 GCM1 JASPAR yes 22221521
chr2 227666652 227666662 EMX1 JASPAR yes 22221522
chr2 227666652 227666662 EMX2 JASPAR yes 22221523
chr2 227666652 227666662 ESX1 JASPAR yes 22221524
chr2 227666652 227666662 EVX1 JASPAR yes 22221525
chr2 227666652 227666662 EVX2 JASPAR yes 22221526
chr2 227666652 227666662 GBX1 JASPAR yes 22221527
chr2 227666652 227666662 GBX2 JASPAR yes 22221528
chr2 227666652 227666662 GSX1 JASPAR yes 22221529
chr2 227666652 227666662 GSX2 JASPAR yes 22221530
chr2 227666652 227666662 HESX1 JASPAR yes 22221531
chr2 227666652 227666662 HOXA2 JASPAR yes 22221532
chr2 227666652 227666662 HOXB2 JASPAR yes 22221533
chr2 227666652 227666662 HOXB3 JASPAR yes 22221534
chr2 227666652 227666662 LHX2 JASPAR yes 22221535
chr2 227666652 227666662 LHX6 JASPAR yes 22221536
chr2 227666652 227666662 MEOX1 JASPAR yes 22221537
chr2 227666652 227666662 MEOX2 JASPAR yes 22221538
chr2 227666652 227666662 MIXL1 JASPAR yes 22221539
chr2 227666652 227666662 MNX1 JASPAR yes 22221540
chr2 227666652 227666662 POU6F1 JASPAR yes 22221541
chr2 227666652 227666662 RAX JASPAR yes 22221542
chr2 227666652 227666663 HOXA10 JASPAR yes 22221543
chr2 227666653 227666661 LMX1A JASPAR yes 22221544
chr2 227666653 227666661 LMX1B JASPAR yes 22221545
chr2 227666653 227666661 NKX6-1 JASPAR yes 22221546
chr2 227666653 227666661 NKX6-2 JASPAR yes 22221547
chr2 227666653 227666661 PDX1 JASPAR yes 22221548
chr2 227666653 227666661 VAX1 JASPAR yes 22221549
chr2 227666653 227666661 VAX2 JASPAR yes 22221550
chr2 227666653 227666661 VSX1 JASPAR yes 22221551
chr2 227666653 227666667 POU1F1 JASPAR yes 22221552
chr2 227666654 227666666 POU3F1 JASPAR yes 22221553
chr2 227666654 227666666 POU3F2 JASPAR yes 22221554
chr2 227666654 227666667 POU3F3 JASPAR yes 22221555
chr2 227666655 227666667 POU2F1 JASPAR yes 22221556
chr2 227666658 227666661 MYB TRANSFAC yes 22221557
chr2 227666661 227666665 YY1 TRANSFAC yes 22221558
chr2 227666668 227666679 FOXC1 JASPAR yes 22221559
chr2 227666668 227666680 FOXC2 JASPAR yes 22221560
chr2 227666693 227666697 YY1 TRANSFAC yes 22221561
chr2 227666713 227666717 NFE TRANSFAC yes 22221562
chr2 227666713 227666734 ZNF263 JASPAR yes 22221563
chr2 227666717 227666738 ZNF263 JASPAR yes 22221564
chr2 227666720 227666741 ZNF263 JASPAR yes 22221565
chr2 227666727 227666748 ZNF263 JASPAR yes 22221566
chr2 227666729 227666749 RREB1 JASPAR yes 22221567
chr2 227666730 227666750 RREB1 JASPAR yes 22221568
chr2 227666733 227666748 NR2C2 JASPAR yes 22221569
chr2 227666733 227666753 RREB1 JASPAR yes 22221570
chr2 227666734 227666744 ZNF740 JASPAR yes 22221571
chr2 227666735 227666755 RREB1 JASPAR yes 22221572
chr2 227666736 227666756 RREB1 JASPAR yes 22221573
chr2 227666737 227666757 RREB1 JASPAR yes 22221574
chr2 227666738 227666748 SP1 JASPAR yes 22221575
chr2 227666738 227666748 SP1 TRANSFAC yes 22221576
chr2 227666738 227666758 RREB1 JASPAR yes 22221577
chr2 227666739 227666749 SP1 JASPAR yes 22221578
chr2 227666740 227666760 RREB1 JASPAR yes 22221579
chr2 227666741 227666751 ZNF740 JASPAR yes 22221580
chr2 227666743 227666763 RREB1 JASPAR yes 22221581
chr2 227666752 227666767 FOXP1 JASPAR yes 22221582
chr2 227666797 227666808 STAT1 JASPAR yes 22221583
chr2 227666797 227666808 STAT3 JASPAR yes 22221584
chr2 227666804 227666814 SP1 JASPAR yes 22221585
chr2 227666811 227666817 MAZ TRANSFAC yes 22221586
SNP sites on vista35006[chr2:227666599-227666819]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 227666615 rs116053963 C T
LEF1
6412820
chr2 227666634 rs537185011 G T no 6412821
chr2 227666657 rs62190995 A C
EMX1 EMX2 ESX1 EVX1 EVX2 GBX1 GBX2 GSX1 GSX2 HESX1 HOXA10 HOXA2 HOXB2 HOXB3 LHX2 LHX6 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 PDX1 POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU6F1 RAX VAX1 VAX2 VSX1
6412822
chr2 227666700 rs79676612 C T no 6412823
chr2 227666740 rs563180871 C T
NR2C2 RREB1 SP1 ZNF263 ZNF740
6412824
chr2 227666749 rs113713744 CA C
RREB1 SP1 ZNF740
6412825
chr2 227666749 rs199681276 C CA
RREB1 SP1 ZNF740
6412826
chr2 227666749 rs554994342 C CA
RREB1 SP1 ZNF740
6412827
Genes possibly regulated by vista35006[chr2:227666599-227666819]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 227596033 227664475 - IRS1 ENSG00000169047.5 227664475 0.78 1.0 3202 97876
chr2 227700297 227863931 + RHBDD1 ENSG00000144468.12 227700297 0.74 1.0 3203 66522
Expression level of Genes
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miRNAs possibly regulated by vista35006[chr2:227666599-227666819]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results