EnhancerDB
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  3. vista35012[chr2:228018054-228018265]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35012[chr2:228018054-228018265]
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Tissue distribution of vista35012
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Transcription factor that possibly regulate vista35012[chr2:228018054-228018265]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228018042 228018061 CTCF JASPAR yes 22221843
chr2 228018042 228018061 CTCF JASPAR yes 81508105
chr2 228018052 228018063 ETV2 JASPAR yes 22221844
chr2 228018052 228018063 ETV2 JASPAR yes 81508106
chr2 228018056 228018071 HSF1 JASPAR yes 22221845
chr2 228018056 228018071 HSF1 JASPAR yes 81508107
chr2 228018089 228018093 LFA1 TRANSFAC yes 22221846
chr2 228018089 228018093 LFA1 TRANSFAC yes 81508108
chr2 228018092 228018096 YY1 TRANSFAC yes 22221847
chr2 228018092 228018096 YY1 TRANSFAC yes 81508109
chr2 228018095 228018099 YY1 TRANSFAC yes 22221848
chr2 228018095 228018099 YY1 TRANSFAC yes 81508110
chr2 228018103 228018106 MYB TRANSFAC yes 22221849
chr2 228018103 228018106 MYB TRANSFAC yes 81508111
chr2 228018136 228018141 MYC TRANSFAC yes 22221850
chr2 228018136 228018141 MYC TRANSFAC yes 81508112
chr2 228018192 228018196 NFE TRANSFAC yes 22221851
chr2 228018192 228018196 NFE TRANSFAC yes 81508113
chr2 228018194 228018204 MLXIPL JASPAR yes 22221852
chr2 228018194 228018204 SREBF1 JASPAR yes 22221853
chr2 228018194 228018204 SREBF2 JASPAR yes 22221854
chr2 228018194 228018204 TFAP4 JASPAR yes 22221855
chr2 228018194 228018204 TFEC JASPAR yes 22221856
chr2 228018194 228018204 MLXIPL JASPAR yes 81508114
chr2 228018194 228018204 SREBF1 JASPAR yes 81508115
chr2 228018194 228018204 SREBF2 JASPAR yes 81508116
chr2 228018194 228018204 TFAP4 JASPAR yes 81508117
chr2 228018194 228018204 TFEC JASPAR yes 81508118
chr2 228018196 228018201 USF2 TRANSFAC yes 22221857
chr2 228018196 228018201 USF2 TRANSFAC yes 81508119
chr2 228018209 228018224 RFX5 JASPAR yes 22221858
chr2 228018209 228018224 RFX5 JASPAR yes 81508120
chr2 228018210 228018216 MZF1 JASPAR yes 22221859
chr2 228018210 228018216 MZF1 JASPAR yes 81508121
chr2 228018222 228018228 ETS1 JASPAR yes 22221860
chr2 228018222 228018228 ETS1 JASPAR yes 81508122
chr2 228018234 228018242 GATA3 JASPAR yes 22221861
chr2 228018234 228018242 GATA3 JASPAR yes 81508123
chr2 228018244 228018258 RORA JASPAR yes 22221862
chr2 228018244 228018258 RORA JASPAR yes 81508124
chr2 228018247 228018267 RREB1 JASPAR yes 22221863
chr2 228018247 228018267 RREB1 JASPAR yes 81508125
SNP sites on vista35012[chr2:228018054-228018265]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista35012[chr2:228018054-228018265]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 227867427 228028829 - COL4A4 ENSG00000081052.10 228028829 0.95 1.0 3204 89436
chr2 228029281 228179508 + COL4A3 ENSG00000169031.14 228029281 0.95 1.0 3205 88984
Expression level of Genes
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miRNAs possibly regulated by vista35012[chr2:228018054-228018265]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results