EnhancerDB
  1. Home
  2. Enhancers
  3. vista35013[chr2:228232228-228232344]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35013[chr2:228232228-228232344]
Back to top
Tissue distribution of vista35013
Back to top
Transcription factor that possibly regulate vista35013[chr2:228232228-228232344]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228232223 228232238 FOXP1 JASPAR yes 22221864
chr2 228232223 228232238 FOXP1 JASPAR yes 81516102
chr2 228232223 228232244 IRF1 JASPAR yes 22221865
chr2 228232223 228232244 IRF1 JASPAR yes 81516103
chr2 228232224 228232239 FOXP1 JASPAR yes 22221866
chr2 228232224 228232239 FOXP1 JASPAR yes 81516104
chr2 228232224 228232245 IRF1 JASPAR yes 22221867
chr2 228232224 228232245 IRF1 JASPAR yes 81516105
chr2 228232225 228232240 FOXP1 JASPAR yes 22221868
chr2 228232225 228232240 FOXP1 JASPAR yes 81516106
chr2 228232227 228232242 FOXP1 JASPAR yes 22221869
chr2 228232227 228232242 FOXP1 JASPAR yes 81516107
chr2 228232231 228232245 SPI1 JASPAR yes 22221870
chr2 228232231 228232245 SPI1 JASPAR yes 81516108
chr2 228232240 228232245 ETS2 TRANSFAC yes 22221871
chr2 228232240 228232245 ETS2 TRANSFAC yes 81516109
chr2 228232244 228232260 SOX4 JASPAR yes 22221872
chr2 228232244 228232260 SOX4 JASPAR yes 81516110
chr2 228232254 228232263 SRY JASPAR yes 22221873
chr2 228232254 228232263 SRY JASPAR yes 81516111
chr2 228232275 228232291 SOX8 JASPAR yes 22221874
chr2 228232275 228232291 SOX8 JASPAR yes 81516112
chr2 228232287 228232291 YY1 TRANSFAC yes 22221875
chr2 228232287 228232291 YY1 TRANSFAC yes 81516113
chr2 228232287 228232298 CEBPB JASPAR yes 22221876
chr2 228232287 228232298 CEBPB JASPAR yes 81516114
chr2 228232288 228232299 CEBPA JASPAR yes 22221877
chr2 228232288 228232299 CEBPA JASPAR yes 81516115
chr2 228232291 228232309 MAFF JASPAR yes 22221878
chr2 228232291 228232309 MAFF JASPAR yes 81516116
chr2 228232292 228232307 MAFK JASPAR yes 22221879
chr2 228232292 228232307 MAFK JASPAR yes 81516117
chr2 228232296 228232307 NRL JASPAR yes 22221880
chr2 228232296 228232307 NRL JASPAR yes 81516118
chr2 228232302 228232308 HiNF-A TRANSFAC yes 22221881
chr2 228232302 228232308 HiNF-A TRANSFAC yes 81516119
chr2 228232317 228232338 IRF1 JASPAR yes 22221882
chr2 228232317 228232338 IRF1 JASPAR yes 81516120
chr2 228232319 228232334 PRDM1 JASPAR yes 22221883
chr2 228232319 228232334 PRDM1 JASPAR yes 81516121
chr2 228232325 228232330 ETS2 TRANSFAC yes 22221884
chr2 228232325 228232330 ETS2 TRANSFAC yes 81516122
chr2 228232334 228232340 TCF4 TRANSFAC yes 22221885
chr2 228232334 228232340 TCF4 TRANSFAC yes 81516123
chr2 228232342 228232347 GATA2 JASPAR yes 22221886
chr2 228232342 228232347 GATA2 JASPAR yes 81516124
SNP sites on vista35013[chr2:228232228-228232344]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228232313 rs539723072 C T no 6414727
Genes possibly regulated by vista35013[chr2:228232228-228232344]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228189867 228222550 + MFF ENSG00000168958.15 228189867 0.69 0.99 3206 57639
chr2 228226872 228246711 - TM4SF20 ENSG00000168955.3 228246711 0.95 1.0 3207 85633
Expression level of Genes
Back to top
miRNAs possibly regulated by vista35013[chr2:228232228-228232344]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results