EnhancerDB
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  3. vista35018[chr2:228253438-228253721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35018[chr2:228253438-228253721]
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Tissue distribution of vista35018
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Transcription factor that possibly regulate vista35018[chr2:228253438-228253721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228253162 228253971 EP300 UCSC Txn Factor no Conserved 108435499
chr2 228253343 228253913 TCF12 UCSC Txn Factor no Conserved 108435500
chr2 228253378 228253796 STAT3 UCSC Txn Factor no Conserved 108435501
chr2 228253428 228253840 BCL3 UCSC Txn Factor no Conserved 108435502
chr2 228253456 228253799 FOSL2 UCSC Txn Factor no Conserved 108435503
chr2 228253463 228253752 FOS UCSC Txn Factor no Conserved 108435504
chr2 228253471 228253807 NR3C1 UCSC Txn Factor no Conserved 108435505
chr2 228253480 228253754 CEBPB UCSC Txn Factor no Conserved 108435506
chr2 228253503 228253769 ATF3 UCSC Txn Factor no Conserved 108435507
chr2 228253438 228253449 FOXH1 JASPAR yes 22222078
chr2 228253439 228253445 ZNF354C JASPAR yes 22222079
chr2 228253439 228253451 PBX1 JASPAR yes 22222080
chr2 228253444 228253457 DUXA JASPAR yes 22222081
chr2 228253444 228253461 BCL6B JASPAR yes 22222082
chr2 228253448 228253453 ETS2 TRANSFAC yes 22222083
chr2 228253452 228253458 TCF1 TRANSFAC yes 22222084
chr2 228253455 228253465 TBX21 JASPAR yes 22222085
chr2 228253455 228253466 TBX2 JASPAR yes 22222086
chr2 228253455 228253468 EOMES JASPAR yes 22222087
chr2 228253456 228253464 MGA JASPAR yes 22222088
chr2 228253456 228253464 TBX15 JASPAR yes 22222089
chr2 228253456 228253464 TBX1 JASPAR yes 22222090
chr2 228253456 228253464 TBX4 JASPAR yes 22222091
chr2 228253456 228253464 TBX5 JASPAR yes 22222092
chr2 228253456 228253466 TBR1 JASPAR yes 22222093
chr2 228253473 228253483 NFATC3 JASPAR yes 22222094
chr2 228253475 228253482 NFATC2 JASPAR yes 22222095
chr2 228253486 228253493 NKX3-1 JASPAR yes 22222096
chr2 228253507 228253510 MYB TRANSFAC yes 22222097
chr2 228253532 228253547 FOXP1 JASPAR yes 22222098
chr2 228253537 228253546 SRY JASPAR yes 22222099
chr2 228253540 228253555 SOX21 JASPAR yes 22222100
chr2 228253548 228253559 CEBPA JASPAR yes 22222101
chr2 228253548 228253560 DBP JASPAR yes 22222102
chr2 228253548 228253560 HLF JASPAR yes 22222103
chr2 228253548 228253560 TEF JASPAR yes 22222104
chr2 228253552 228253563 CDX2 JASPAR yes 22222105
chr2 228253553 228253564 HOXA10 JASPAR yes 22222106
chr2 228253554 228253563 CDX1 JASPAR yes 22222107
chr2 228253554 228253564 HOXA13 JASPAR yes 22222108
chr2 228253554 228253564 HOXB13 JASPAR yes 22222109
chr2 228253554 228253564 HOXC10 JASPAR yes 22222110
chr2 228253554 228253564 HOXD13 JASPAR yes 22222111
chr2 228253563 228253567 YY1 TRANSFAC yes 22222112
chr2 228253563 228253578 STAT1 JASPAR yes 22222113
chr2 228253565 228253576 STAT1 JASPAR yes 22222114
chr2 228253565 228253576 STAT3 JASPAR yes 22222115
chr2 228253579 228253593 TLX1 JASPAR yes 22222116
chr2 228253586 228253596 TFCP2 JASPAR yes 22222117
chr2 228253611 228253617 NFE2 TRANSFAC yes 22222118
chr2 228253616 228253625 SOX9 JASPAR yes 22222119
chr2 228253632 228253637 ATF1 TRANSFAC yes 22222120
chr2 228253647 228253658 FOXB1 JASPAR yes 22222121
chr2 228253648 228253652 YY1 TRANSFAC yes 22222122
chr2 228253662 228253676 ATF7 JASPAR yes 22222123
chr2 228253663 228253675 JDP2 JASPAR yes 22222124
chr2 228253669 228253685 SOX8 JASPAR yes 22222125
chr2 228253692 228253701 SRY JASPAR yes 22222126
chr2 228253695 228253711 SOX8 JASPAR yes 22222127
chr2 228253704 228253708 YY1 TRANSFAC yes 22222128
SNP sites on vista35018[chr2:228253438-228253721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228253451 rs4075149 C G,T
BCL3 BCL6B DUXA EP300 ETS2 PBX1 STAT3 TCF12
6414942
chr2 228253553 rs35438597 G A
ATF3 BCL3 CDX2 CEBPA CEBPB DBP EP300 FOS FOSL2 HLF HOXA10 NR3C1 SOX21 STAT3 TCF12 TEF
6414943
chr2 228253570 rs564885545 C A
ATF3 BCL3 CEBPB EP300 FOS FOSL2 NR3C1 STAT1 STAT3 TCF12
6414944
chr2 228253609 rs4075150 G A
ATF3 BCL3 CEBPB EP300 FOS FOSL2 NR3C1 STAT3 TCF12
6414945
chr2 228253619 rs548358138 A G
ATF3 BCL3 CEBPB EP300 FOS FOSL2 NR3C1 SOX9 STAT3 TCF12
6414946
chr2 228253636 rs148996505 C T
ATF1 ATF3 BCL3 CEBPB EP300 FOS FOSL2 NR3C1 STAT3 TCF12
6414947
chr2 228253643 rs181905030 G A
ATF3 BCL3 CEBPB EP300 FOS FOSL2 NR3C1 STAT3 TCF12
6414948
Genes possibly regulated by vista35018[chr2:228253438-228253721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228189867 228222550 + MFF ENSG00000168958.15 228189867 0.69 0.99 3206 36429
chr2 228226872 228246711 - TM4SF20 ENSG00000168955.3 228246711 0.95 1.0 3207 93273
chr2 228336868 228425930 + AGFG1 ENSG00000173744.13 228336868 0.81 0.99 3208 16853
Expression level of Genes
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miRNAs possibly regulated by vista35018[chr2:228253438-228253721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results