EnhancerDB
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  3. vista35020[chr2:228276107-228276256]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35020[chr2:228276107-228276256]
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Tissue distribution of vista35020
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Transcription factor that possibly regulate vista35020[chr2:228276107-228276256]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228275955 228276504 NFIC UCSC Txn Factor no Conserved 108435515
chr2 228275986 228276452 RUNX3 UCSC Txn Factor no Conserved 108435516
chr2 228276074 228276501 RELA UCSC Txn Factor no Conserved 108435517
chr2 228276133 228276454 EBF1 UCSC Txn Factor no Conserved 108435518
chr2 228276101 228276114 SCRT2 JASPAR yes 22222186
chr2 228276101 228276114 SCRT2 JASPAR yes 81520386
chr2 228276101 228276116 SCRT1 JASPAR yes 22222187
chr2 228276101 228276116 SCRT1 JASPAR yes 81520387
chr2 228276114 228276119 ETS2 TRANSFAC yes 22222188
chr2 228276114 228276119 ETS2 TRANSFAC yes 81520388
chr2 228276137 228276141 LFA1 TRANSFAC yes 22222189
chr2 228276137 228276141 LFA1 TRANSFAC yes 81520389
chr2 228276148 228276159 JUND JASPAR yes 22222190
chr2 228276148 228276159 JUND JASPAR yes 81520390
chr2 228276149 228276158 JDP2 JASPAR yes 22222191
chr2 228276149 228276158 JDP2 JASPAR yes 81520391
chr2 228276149 228276160 JUNB JASPAR yes 22222192
chr2 228276149 228276160 JUNB JASPAR yes 81520392
chr2 228276149 228276163 JUN JASPAR yes 22222193
chr2 228276149 228276163 JUN JASPAR yes 81520393
chr2 228276150 228276161 BATF JASPAR yes 22222194
chr2 228276150 228276161 BATF JASPAR yes 81520394
chr2 228276159 228276163 NFE TRANSFAC yes 22222195
chr2 228276159 228276163 NFE TRANSFAC yes 81520395
chr2 228276202 228276217 JUND JASPAR yes 22222196
chr2 228276202 228276217 JUND JASPAR yes 81520396
chr2 228276247 228276260 DUXA JASPAR yes 22222197
chr2 228276247 228276260 DUXA JASPAR yes 81520397
chr2 228276248 228276259 BATF JASPAR yes 22222198
chr2 228276248 228276259 DUX4 JASPAR yes 22222199
chr2 228276248 228276259 BATF JASPAR yes 81520398
chr2 228276248 228276259 DUX4 JASPAR yes 81520399
chr2 228276253 228276257 YY1 TRANSFAC yes 22222200
chr2 228276253 228276257 YY1 TRANSFAC yes 81520400
SNP sites on vista35020[chr2:228276107-228276256]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228276144 rs533576044 A G
EBF1 NFIC RELA RUNX3
6415351
chr2 228276177 rs558207862 G C
EBF1 NFIC RELA RUNX3
6415352
chr2 228276207 rs186521652 G A
EBF1 JUND NFIC RELA RUNX3
6415353
Genes possibly regulated by vista35020[chr2:228276107-228276256]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228189867 228222550 + MFF ENSG00000168958.15 228189867 0.69 0.99 3206 13760
chr2 228226872 228246711 - TM4SF20 ENSG00000168955.3 228246711 0.95 1.0 3207 70604
chr2 228336868 228425930 + AGFG1 ENSG00000173744.13 228336868 0.81 0.99 3208 39388
Expression level of Genes
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miRNAs possibly regulated by vista35020[chr2:228276107-228276256]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results