EnhancerDB
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  3. vista35023[chr2:228331050-228331499]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35023[chr2:228331050-228331499]
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Tissue distribution of vista35023
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Transcription factor that possibly regulate vista35023[chr2:228331050-228331499]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228330935 228331277 TFAP2C UCSC Txn Factor no Conserved 108435523
chr2 228330951 228331652 EP300 UCSC Txn Factor no Conserved 108435524
chr2 228330966 228331229 TFAP2A UCSC Txn Factor no Conserved 108435525
chr2 228331040 228331369 JUND UCSC Txn Factor no Conserved 108435526
chr2 228331050 228331350 FOSL2 UCSC Txn Factor no Conserved 108435527
chr2 228331070 228331081 EBF1 JASPAR yes 22222352
chr2 228331070 228331081 EBF1 JASPAR yes 81526365
chr2 228331076 228331081 SP1 TRANSFAC yes 22222353
chr2 228331076 228331081 SP1 TRANSFAC yes 81526366
chr2 228331080 228331095 TFAP2A JASPAR yes 22222354
chr2 228331080 228331095 TFAP2A JASPAR yes 81526367
chr2 228331082 228331097 TFAP2C JASPAR yes 22222355
chr2 228331082 228331097 TFAP2C JASPAR yes 81526368
chr2 228331083 228331095 TFAP2A JASPAR yes 22222356
chr2 228331083 228331095 TFAP2B JASPAR yes 22222357
chr2 228331083 228331095 TFAP2C JASPAR yes 22222358
chr2 228331083 228331095 TFAP2A JASPAR yes 81526369
chr2 228331083 228331095 TFAP2B JASPAR yes 81526370
chr2 228331083 228331095 TFAP2C JASPAR yes 81526371
chr2 228331084 228331093 TFAP2A TRANSFAC yes 22222359
chr2 228331084 228331093 TFAP2A TRANSFAC yes 81526372
chr2 228331107 228331125 ESR2 JASPAR yes 22222360
chr2 228331107 228331125 ESR2 JASPAR yes 81526373
chr2 228331114 228331128 CREB3L1 JASPAR yes 22222361
chr2 228331114 228331128 CREB3L1 JASPAR yes 81526374
chr2 228331116 228331127 NFE2L2 JASPAR yes 22222362
chr2 228331116 228331127 NFE2L2 JASPAR yes 81526375
chr2 228331146 228331160 EBF1 JASPAR yes 22222363
chr2 228331146 228331160 EBF1 JASPAR yes 81526376
chr2 228331147 228331162 TFAP2C JASPAR yes 22222364
chr2 228331147 228331162 TFAP2C JASPAR yes 81526377
chr2 228331148 228331159 EBF1 JASPAR yes 22222365
chr2 228331148 228331159 EBF1 JASPAR yes 81526378
chr2 228331149 228331158 TFAP2A JASPAR yes 22222366
chr2 228331149 228331158 TFAP2A JASPAR yes 81526379
chr2 228331153 228331158 SP1 TRANSFAC yes 22222367
chr2 228331153 228331158 SP1 TRANSFAC yes 81526380
chr2 228331183 228331188 GATA2 JASPAR yes 22222368
chr2 228331183 228331188 GATA2 JASPAR yes 81526381
chr2 228331189 228331203 JUN JASPAR yes 22222369
chr2 228331189 228331203 JUN JASPAR yes 81526382
chr2 228331193 228331204 FOS JASPAR yes 22222370
chr2 228331193 228331204 FOSL1 JASPAR yes 22222371
chr2 228331193 228331204 JUND JASPAR yes 22222372
chr2 228331193 228331204 FOS JASPAR yes 81526383
chr2 228331193 228331204 FOSL1 JASPAR yes 81526384
chr2 228331193 228331204 JUND JASPAR yes 81526385
chr2 228331194 228331205 FOSL2 JASPAR yes 22222373
chr2 228331194 228331205 JUNB JASPAR yes 22222374
chr2 228331194 228331205 FOSL2 JASPAR yes 81526386
chr2 228331194 228331205 JUNB JASPAR yes 81526387
chr2 228331194 228331208 JUN JASPAR yes 22222375
chr2 228331194 228331208 JUN JASPAR yes 81526388
chr2 228331207 228331221 GATA2 JASPAR yes 22222376
chr2 228331207 228331221 GATA2 JASPAR yes 81526389
chr2 228331209 228331215 GATA1 TRANSFAC yes 22222377
chr2 228331209 228331215 GATA1 TRANSFAC yes 81526390
chr2 228331209 228331217 GATA5 JASPAR yes 22222378
chr2 228331209 228331217 GATA5 JASPAR yes 81526391
chr2 228331275 228331285 ETV3 JASPAR yes 22222379
chr2 228331275 228331285 ETV3 JASPAR yes 81526392
chr2 228331286 228331291 H4TF1 TRANSFAC yes 22222380
chr2 228331286 228331291 H4TF1 TRANSFAC yes 81526393
chr2 228331304 228331309 ETS2 TRANSFAC yes 22222381
chr2 228331304 228331309 ETS2 TRANSFAC yes 81526394
chr2 228331309 228331312 MYB TRANSFAC yes 22222382
chr2 228331309 228331312 MYB TRANSFAC yes 81526395
chr2 228331328 228331335 MEIS1 JASPAR yes 22222383
chr2 228331328 228331335 MEIS1 JASPAR yes 81526396
chr2 228331328 228331336 MEIS2 JASPAR yes 22222384
chr2 228331328 228331336 MEIS2 JASPAR yes 81526397
chr2 228331371 228331382 FOXH1 JASPAR yes 22222385
chr2 228331371 228331382 FOXH1 JASPAR yes 81526398
chr2 228331379 228331397 MAFF JASPAR yes 22222386
chr2 228331379 228331397 MAFF JASPAR yes 81526399
chr2 228331381 228331396 MAFK JASPAR yes 22222387
chr2 228331381 228331396 MAFK JASPAR yes 81526400
chr2 228331412 228331426 GATA2 JASPAR yes 22222388
chr2 228331412 228331426 GATA2 JASPAR yes 81526401
chr2 228331416 228331424 GATA3 JASPAR yes 22222389
chr2 228331416 228331424 GATA3 JASPAR yes 81526402
chr2 228331425 228331443 NFYA JASPAR yes 22222390
chr2 228331425 228331443 NFYA JASPAR yes 81526403
chr2 228331445 228331449 YY1 TRANSFAC yes 22222391
chr2 228331445 228331449 YY1 TRANSFAC yes 81526404
chr2 228331460 228331464 H1TF2 TRANSFAC yes 22222392
chr2 228331460 228331464 NFE TRANSFAC yes 22222393
chr2 228331460 228331464 SRF TRANSFAC yes 22222394
chr2 228331460 228331464 H1TF2 TRANSFAC yes 81526405
chr2 228331460 228331464 NFE TRANSFAC yes 81526406
chr2 228331460 228331464 SRF TRANSFAC yes 81526407
chr2 228331460 228331475 FOXA1 JASPAR yes 22222395
chr2 228331460 228331475 FOXA1 JASPAR yes 81526408
chr2 228331462 228331474 FOXC2 JASPAR yes 22222396
chr2 228331462 228331474 FOXC2 JASPAR yes 81526409
chr2 228331463 228331474 FOXB1 JASPAR yes 22222397
chr2 228331463 228331474 FOXC1 JASPAR yes 22222398
chr2 228331463 228331474 FOXB1 JASPAR yes 81526410
chr2 228331463 228331474 FOXC1 JASPAR yes 81526411
chr2 228331464 228331468 YY1 TRANSFAC yes 22222399
chr2 228331464 228331468 YY1 TRANSFAC yes 81526412
chr2 228331464 228331475 FOXA1 JASPAR yes 22222400
chr2 228331464 228331475 FOXA1 JASPAR yes 81526413
chr2 228331481 228331489 ISL2 JASPAR yes 22222401
chr2 228331481 228331489 ISL2 JASPAR yes 81526414
chr2 228331481 228331490 NKX3-2 JASPAR yes 22222402
chr2 228331481 228331490 NKX3-2 JASPAR yes 81526415
chr2 228331484 228331493 NFIX JASPAR yes 22222403
chr2 228331484 228331493 NFIX JASPAR yes 81526416
chr2 228331484 228331494 NFIA JASPAR yes 22222404
chr2 228331484 228331494 NFIA JASPAR yes 81526417
chr2 228331486 228331492 NFIC JASPAR yes 22222405
chr2 228331486 228331492 NFIC JASPAR yes 81526418
SNP sites on vista35023[chr2:228331050-228331499]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228331057 rs62189451 C T
EP300 FOSL2 JUND TFAP2A TFAP2C
6415879
chr2 228331102 rs73100155 G A
EP300 FOSL2 JUND TFAP2A TFAP2C
6415880
chr2 228331235 rs76662180 A C
EP300 FOSL2 JUND TFAP2C
6415881
chr2 228331237 rs192778812 C G
EP300 FOSL2 JUND TFAP2C
6415882
chr2 228331304 rs116419344 G T
EP300 ETS2 FOSL2 JUND
6415883
chr2 228331327 rs73081432 C G
EP300 FOSL2 JUND
6415884
Genes possibly regulated by vista35023[chr2:228331050-228331499]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228226872 228246711 - TM4SF20 ENSG00000168955.3 228246711 0.95 1.0 3207 15661
chr2 228336868 228425930 + AGFG1 ENSG00000173744.13 228336868 0.81 0.99 3208 94631
Expression level of Genes
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miRNAs possibly regulated by vista35023[chr2:228331050-228331499]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results