EnhancerDB
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  3. vista35036[chr2:228670402-228670815]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35036[chr2:228670402-228670815]
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Tissue distribution of vista35036
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Transcription factor that possibly regulate vista35036[chr2:228670402-228670815]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228670444 228670452 OTX1 JASPAR yes 22223042
chr2 228670444 228670452 OTX2 JASPAR yes 22223043
chr2 228670449 228670463 SPI1 JASPAR yes 22223044
chr2 228670450 228670463 ELF1 JASPAR yes 22223045
chr2 228670451 228670463 EHF JASPAR yes 22223046
chr2 228670451 228670464 ELF3 JASPAR yes 22223047
chr2 228670452 228670463 ELF5 JASPAR yes 22223048
chr2 228670453 228670464 FLI1 JASPAR yes 22223049
chr2 228670454 228670459 ETS2 TRANSFAC yes 22223050
chr2 228670454 228670462 FEV JASPAR yes 22223051
chr2 228670455 228670462 SPI1 JASPAR yes 22223052
chr2 228670472 228670481 TFAP2A JASPAR yes 22223053
chr2 228670481 228670492 NRL JASPAR yes 22223054
chr2 228670514 228670529 IRF9 JASPAR yes 22223055
chr2 228670515 228670529 IRF7 JASPAR yes 22223056
chr2 228670515 228670529 IRF8 JASPAR yes 22223057
chr2 228670529 228670536 E2F1 TRANSFAC yes 22223058
chr2 228670562 228670572 MAX JASPAR yes 22223059
chr2 228670563 228670573 MAX JASPAR yes 22223060
chr2 228670563 228670573 MLXIPL JASPAR yes 22223061
chr2 228670563 228670573 MLX JASPAR yes 22223062
chr2 228670563 228670573 MNT JASPAR yes 22223063
chr2 228670563 228670573 TFE3 JASPAR yes 22223064
chr2 228670564 228670571 USF1 JASPAR yes 22223065
chr2 228670565 228670570 MYC TRANSFAC yes 22223066
chr2 228670565 228670570 USF1 TRANSFAC yes 22223067
chr2 228670565 228670570 USF2 TRANSFAC yes 22223068
chr2 228670618 228670630 TEAD1 JASPAR yes 22223069
chr2 228670631 228670634 MYB TRANSFAC yes 22223070
chr2 228670634 228670648 SPIC JASPAR yes 22223071
chr2 228670635 228670648 ELF1 JASPAR yes 22223072
chr2 228670636 228670648 EHF JASPAR yes 22223073
chr2 228670636 228670648 ELF1 JASPAR yes 22223074
chr2 228670636 228670648 ELF4 JASPAR yes 22223075
chr2 228670636 228670649 ELF3 JASPAR yes 22223076
chr2 228670637 228670648 ELF5 JASPAR yes 22223077
chr2 228670637 228670648 ETV2 JASPAR yes 22223078
chr2 228670638 228670648 ELK3 JASPAR yes 22223079
chr2 228670638 228670648 ERF JASPAR yes 22223080
chr2 228670638 228670648 ERG JASPAR yes 22223081
chr2 228670638 228670648 ETS1 JASPAR yes 22223082
chr2 228670638 228670648 ETV6 JASPAR yes 22223083
chr2 228670638 228670648 FEV JASPAR yes 22223084
chr2 228670638 228670648 FLI1 JASPAR yes 22223085
chr2 228670638 228670648 GABPA JASPAR yes 22223086
chr2 228670638 228670649 FLI1 JASPAR yes 22223087
chr2 228670639 228670647 EHF JASPAR yes 22223088
chr2 228670639 228670647 FEV JASPAR yes 22223089
chr2 228670640 228670647 SPI1 JASPAR yes 22223090
chr2 228670644 228670655 CEBPA JASPAR yes 22223091
chr2 228670645 228670656 CEBPB JASPAR yes 22223092
chr2 228670654 228670667 POU2F2 JASPAR yes 22223093
chr2 228670668 228670679 STAT3 JASPAR yes 22223094
chr2 228670686 228670689 MYB TRANSFAC yes 22223095
chr2 228670694 228670708 RORA JASPAR yes 22223096
chr2 228670700 228670718 RARA JASPAR yes 22223097
chr2 228670702 228670706 ESR1 TRANSFAC yes 22223098
chr2 228670709 228670723 BATF3 JASPAR yes 22223099
chr2 228670710 228670722 JDP2 JASPAR yes 22223100
chr2 228670710 228670725 JUND JASPAR yes 22223101
chr2 228670718 228670722 YY1 TRANSFAC yes 22223102
chr2 228670724 228670745 IRF1 JASPAR yes 22223103
chr2 228670726 228670741 PRDM1 JASPAR yes 22223104
chr2 228670726 228670741 STAT2 JASPAR yes 22223105
chr2 228670730 228670745 MEF2C JASPAR yes 22223106
chr2 228670739 228670742 MYB TRANSFAC yes 22223107
chr2 228670760 228670769 NFIX JASPAR yes 22223108
chr2 228670760 228670770 NFIA JASPAR yes 22223109
chr2 228670762 228670768 NFIC JASPAR yes 22223110
chr2 228670779 228670783 YY1 TRANSFAC yes 22223111
chr2 228670788 228670802 SPI1 JASPAR yes 22223112
chr2 228670790 228670811 IRF1 JASPAR yes 22223113
SNP sites on vista35036[chr2:228670402-228670815]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228670437 rs10187276 T C no 6418389
chr2 228670476 rs1811711 C G
TFAP2A
6418390
chr2 228670575 rs10175070 G A no 6418391
chr2 228670596 rs372577262 GCGCGGGGAA G no 6418392
chr2 228670596 rs66843448 GCGCGGGGAA G no 6418393
chr2 228670606 rs13427775 C T no 6418394
chr2 228670612 rs544659038 T TG no 6418395
chr2 228670676 rs564722290 G A
STAT3
6418396
chr2 228670679 rs115211360 T C
STAT3
6418397
chr2 228670757 rs530204634 T G no 6418398
Genes possibly regulated by vista35036[chr2:228670402-228670815]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228549926 228582728 - SLC19A3 ENSG00000135917.9 228582728 0.89 0.93 3210 12326
chr2 228678558 228682272 + CCL20 ENSG00000115009.7 228678558 0.95 0.97 3211 92257
chr2 228735770 228789060 + DAW1 ENSG00000123977.5 228735770 0.99 0.83 3212 35045
Expression level of Genes
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miRNAs possibly regulated by vista35036[chr2:228670402-228670815]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results