EnhancerDB
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  3. vista35038[chr2:228713173-228713709]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35038[chr2:228713173-228713709]
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Tissue distribution of vista35038
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Transcription factor that possibly regulate vista35038[chr2:228713173-228713709]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228713416 228713729 RUNX3 UCSC Txn Factor no Conserved 108435537
chr2 228713159 228713173 FOXF2 JASPAR yes 22223164
chr2 228713159 228713173 FOXF2 JASPAR yes 81552182
chr2 228713160 228713175 FOXA1 JASPAR yes 22223165
chr2 228713160 228713175 FOXA1 JASPAR yes 81552183
chr2 228713161 228713173 FOXC2 JASPAR yes 22223166
chr2 228713161 228713173 FOXC2 JASPAR yes 81552185
chr2 228713192 228713198 LEF1 TRANSFAC yes 22223167
chr2 228713192 228713198 SOX10 JASPAR yes 22223168
chr2 228713192 228713198 LEF1 TRANSFAC yes 81552186
chr2 228713192 228713198 SOX10 JASPAR yes 81552187
chr2 228713201 228713216 JUND JASPAR yes 22223169
chr2 228713201 228713216 JUND JASPAR yes 81552188
chr2 228713202 228713215 JUN JASPAR yes 22223170
chr2 228713202 228713215 JUN JASPAR yes 81552189
chr2 228713203 228713216 ATF4 JASPAR yes 22223171
chr2 228713203 228713216 ATF4 JASPAR yes 81552190
chr2 228713217 228713231 SPI1 JASPAR yes 22223172
chr2 228713217 228713231 SPIC JASPAR yes 22223173
chr2 228713217 228713231 SPI1 JASPAR yes 81552191
chr2 228713217 228713231 SPIC JASPAR yes 81552192
chr2 228713218 228713239 ZNF263 JASPAR yes 22223174
chr2 228713218 228713239 ZNF263 JASPAR yes 81552193
chr2 228713221 228713242 ZNF263 JASPAR yes 22223175
chr2 228713221 228713242 ZNF263 JASPAR yes 81552194
chr2 228713222 228713227 ETS2 TRANSFAC yes 22223176
chr2 228713222 228713227 ETS2 TRANSFAC yes 81552195
chr2 228713227 228713242 PRDM1 JASPAR yes 22223177
chr2 228713227 228713242 STAT2 JASPAR yes 22223178
chr2 228713227 228713242 PRDM1 JASPAR yes 81552196
chr2 228713227 228713242 STAT2 JASPAR yes 81552197
chr2 228713234 228713250 SOX8 JASPAR yes 22223179
chr2 228713234 228713250 SOX8 JASPAR yes 81552198
chr2 228713241 228713257 SOX8 JASPAR yes 22223180
chr2 228713241 228713257 SOX8 JASPAR yes 81552199
chr2 228713248 228713268 TP63 JASPAR yes 22223181
chr2 228713248 228713268 TP63 JASPAR yes 81552200
chr2 228713249 228713267 TP53 JASPAR yes 22223182
chr2 228713249 228713267 TP63 JASPAR yes 22223183
chr2 228713249 228713267 TP73 JASPAR yes 22223184
chr2 228713249 228713267 TP53 JASPAR yes 81552201
chr2 228713249 228713267 TP63 JASPAR yes 81552202
chr2 228713249 228713267 TP73 JASPAR yes 81552203
chr2 228713250 228713265 TP53 JASPAR yes 22223185
chr2 228713250 228713265 TP53 JASPAR yes 81552204
chr2 228713258 228713261 MYB TRANSFAC yes 22223186
chr2 228713258 228713261 MYB TRANSFAC yes 81552205
chr2 228713267 228713288 IRF1 JASPAR yes 22223187
chr2 228713267 228713288 IRF1 JASPAR yes 81552206
chr2 228713269 228713284 PRDM1 JASPAR yes 22223188
chr2 228713269 228713284 PRDM1 JASPAR yes 81552207
chr2 228713272 228713283 E2F6 JASPAR yes 22223189
chr2 228713272 228713283 E2F6 JASPAR yes 81552208
chr2 228713286 228713301 MEF2C JASPAR yes 22223190
chr2 228713286 228713301 MEF2C JASPAR yes 81552209
chr2 228713287 228713302 MEF2A JASPAR yes 22223191
chr2 228713287 228713302 MEF2A JASPAR yes 81552210
chr2 228713288 228713300 MEF2B JASPAR yes 22223192
chr2 228713288 228713300 MEF2B JASPAR yes 81552211
chr2 228713298 228713319 ZNF263 JASPAR yes 22223193
chr2 228713298 228713319 ZNF263 JASPAR yes 81552212
chr2 228713302 228713316 SPI1 JASPAR yes 22223194
chr2 228713302 228713316 SPI1 JASPAR yes 81552213
chr2 228713303 228713324 ZNF263 JASPAR yes 22223195
chr2 228713303 228713324 ZNF263 JASPAR yes 81552214
chr2 228713304 228713316 EHF JASPAR yes 22223196
chr2 228713304 228713316 ELF4 JASPAR yes 22223197
chr2 228713304 228713316 EHF JASPAR yes 81552215
chr2 228713304 228713316 ELF4 JASPAR yes 81552216
chr2 228713304 228713317 ELF3 JASPAR yes 22223198
chr2 228713304 228713317 ELF3 JASPAR yes 81552217
chr2 228713305 228713310 SP1 TRANSFAC yes 22223199
chr2 228713305 228713310 SP1 TRANSFAC yes 81552218
chr2 228713308 228713314 ETS1 JASPAR yes 22223200
chr2 228713308 228713314 SPI1 JASPAR yes 22223201
chr2 228713308 228713314 ETS1 JASPAR yes 81552219
chr2 228713308 228713314 SPI1 JASPAR yes 81552220
chr2 228713310 228713331 ZNF263 JASPAR yes 22223202
chr2 228713310 228713331 ZNF263 JASPAR yes 81552221
chr2 228713311 228713316 ETS2 TRANSFAC yes 22223203
chr2 228713311 228713316 ETS2 TRANSFAC yes 81552222
chr2 228713316 228713330 TCF7L2 JASPAR yes 22223204
chr2 228713316 228713330 TCF7L2 JASPAR yes 81552223
chr2 228713316 228713331 LEF1 JASPAR yes 22223205
chr2 228713316 228713331 LEF1 JASPAR yes 81552224
chr2 228713318 228713335 RXRA JASPAR yes 22223206
chr2 228713318 228713335 RXRA JASPAR yes 81552225
chr2 228713329 228713339 REL JASPAR yes 22223207
chr2 228713329 228713339 REL JASPAR yes 81552226
chr2 228713330 228713334 ESR1 TRANSFAC yes 22223208
chr2 228713330 228713334 ESR1 TRANSFAC yes 81552227
chr2 228713339 228713349 POU6F2 JASPAR yes 22223209
chr2 228713339 228713349 POU6F2 JASPAR yes 81552228
chr2 228713340 228713350 GSX1 JASPAR yes 22223210
chr2 228713340 228713350 GSX2 JASPAR yes 22223211
chr2 228713340 228713350 HOXB3 JASPAR yes 22223212
chr2 228713340 228713350 GSX1 JASPAR yes 81552229
chr2 228713340 228713350 GSX2 JASPAR yes 81552230
chr2 228713340 228713350 HOXB3 JASPAR yes 81552231
chr2 228713340 228713351 HOXC13 JASPAR yes 22223213
chr2 228713340 228713351 HOXD12 JASPAR yes 22223214
chr2 228713340 228713351 HOXC13 JASPAR yes 81552232
chr2 228713340 228713351 HOXD12 JASPAR yes 81552233
chr2 228713341 228713349 NKX6-1 JASPAR yes 22223215
chr2 228713341 228713349 NKX6-2 JASPAR yes 22223216
chr2 228713341 228713349 NKX6-1 JASPAR yes 81552234
chr2 228713341 228713349 NKX6-2 JASPAR yes 81552235
chr2 228713341 228713351 HOXC10 JASPAR yes 22223217
chr2 228713341 228713351 HOXD13 JASPAR yes 22223218
chr2 228713341 228713351 HOXC10 JASPAR yes 81552236
chr2 228713341 228713351 HOXD13 JASPAR yes 81552237
chr2 228713343 228713347 YY1 TRANSFAC yes 22223219
chr2 228713343 228713347 YY1 TRANSFAC yes 81552238
chr2 228713353 228713364 NFKB1 JASPAR yes 22223220
chr2 228713353 228713364 NFKB1 JASPAR yes 81552239
chr2 228713375 228713380 ETS2 TRANSFAC yes 22223221
chr2 228713375 228713380 ETS2 TRANSFAC yes 81552240
chr2 228713402 228713423 ZNF263 JASPAR yes 22223222
chr2 228713402 228713423 ZNF263 JASPAR yes 81552241
chr2 228713405 228713415 SP1 JASPAR yes 22223223
chr2 228713405 228713415 SP1 JASPAR yes 81552242
chr2 228713408 228713418 MZF1 JASPAR yes 22223224
chr2 228713408 228713418 MZF1 JASPAR yes 81552243
chr2 228713413 228713428 HSF1 JASPAR yes 22223225
chr2 228713413 228713428 HSF1 JASPAR yes 81552244
chr2 228713430 228713446 RFX3 JASPAR yes 22223226
chr2 228713430 228713446 RFX4 JASPAR yes 22223227
chr2 228713430 228713446 RFX3 JASPAR yes 81552245
chr2 228713430 228713446 RFX4 JASPAR yes 81552246
chr2 228713440 228713458 IRF2 JASPAR yes 22223228
chr2 228713440 228713458 IRF2 JASPAR yes 81552247
chr2 228713449 228713464 PRDM1 JASPAR yes 22223229
chr2 228713449 228713464 PRDM1 JASPAR yes 81552248
chr2 228713450 228713454 YY1 TRANSFAC yes 22223230
chr2 228713450 228713454 YY1 TRANSFAC yes 81552249
chr2 228713452 228713463 E2F6 JASPAR yes 22223231
chr2 228713452 228713463 E2F6 JASPAR yes 81552250
chr2 228713522 228713535 ELF1 JASPAR yes 22223232
chr2 228713522 228713535 ELF1 JASPAR yes 81552251
chr2 228713526 228713531 ETS2 TRANSFAC yes 22223233
chr2 228713526 228713531 ETS2 TRANSFAC yes 81552252
chr2 228713526 228713534 FEV JASPAR yes 22223234
chr2 228713526 228713534 FEV JASPAR yes 81552253
chr2 228713527 228713534 SPI1 JASPAR yes 22223235
chr2 228713527 228713534 SPI1 JASPAR yes 81552254
chr2 228713549 228713556 SPIB JASPAR yes 22223236
chr2 228713549 228713556 SPIB JASPAR yes 81552255
chr2 228713572 228713586 TCF7L2 JASPAR yes 22223237
chr2 228713572 228713586 TCF7L2 JASPAR yes 81552256
chr2 228713586 228713589 MYB TRANSFAC yes 22223238
chr2 228713586 228713589 MYB TRANSFAC yes 81552257
chr2 228713591 228713604 SMAD2 JASPAR yes 22223239
chr2 228713591 228713604 SMAD2 JASPAR yes 81552258
chr2 228713605 228713619 RORA JASPAR yes 22223240
chr2 228713605 228713619 RORA JASPAR yes 81552259
chr2 228713606 228713616 RORA JASPAR yes 22223241
chr2 228713606 228713616 RORA JASPAR yes 81552260
chr2 228713616 228713630 RORA JASPAR yes 22223242
chr2 228713616 228713630 RORA JASPAR yes 81552261
chr2 228713619 228713629 RORA JASPAR yes 22223243
chr2 228713619 228713629 RORA JASPAR yes 81552262
chr2 228713622 228713628 ESR1 TRANSFAC yes 22223244
chr2 228713622 228713628 ESR1 TRANSFAC yes 81552263
chr2 228713624 228713628 ESR1 TRANSFAC yes 22223245
chr2 228713624 228713628 ESR1 TRANSFAC yes 81552264
chr2 228713632 228713636 YY1 TRANSFAC yes 22223246
chr2 228713632 228713636 YY1 TRANSFAC yes 81552265
chr2 228713643 228713653 GABPA JASPAR yes 22223247
chr2 228713643 228713653 GABPA JASPAR yes 81552266
chr2 228713645 228713651 ETS1 JASPAR yes 22223248
chr2 228713645 228713651 SPI1 JASPAR yes 22223249
chr2 228713645 228713651 ETS1 JASPAR yes 81552267
chr2 228713645 228713651 SPI1 JASPAR yes 81552268
chr2 228713665 228713677 SRF JASPAR yes 22223250
chr2 228713665 228713677 SRF JASPAR yes 81552269
chr2 228713670 228713681 PROP1 JASPAR yes 22223251
chr2 228713670 228713681 PROP1 JASPAR yes 81552270
chr2 228713682 228713686 YY1 TRANSFAC yes 22223252
chr2 228713682 228713686 YY1 TRANSFAC yes 81552271
chr2 228713697 228713718 IRF1 JASPAR yes 22223253
chr2 228713697 228713718 IRF1 JASPAR yes 81552272
chr2 228713702 228713720 IRF2 JASPAR yes 22223254
chr2 228713702 228713720 IRF2 JASPAR yes 81552273
chr2 228713703 228713724 IRF1 JASPAR yes 22223255
chr2 228713703 228713724 IRF1 JASPAR yes 81552274
chr2 228713705 228713720 PRDM1 JASPAR yes 22223256
chr2 228713705 228713720 STAT2 JASPAR yes 22223257
chr2 228713705 228713720 PRDM1 JASPAR yes 81552275
chr2 228713705 228713720 STAT2 JASPAR yes 81552276
chr2 228713706 228713720 STAT1 JASPAR yes 22223258
chr2 228713706 228713720 STAT1 JASPAR yes 81552277
chr2 228713707 228713721 IRF8 JASPAR yes 22223259
chr2 228713707 228713721 IRF8 JASPAR yes 81552278
chr2 228713707 228713722 IRF9 JASPAR yes 22223260
chr2 228713707 228713722 IRF9 JASPAR yes 81552279
SNP sites on vista35038[chr2:228713173-228713709]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228713179 rs4487084 G A no 6418766
chr2 228713241 rs2056566 G A
PRDM1 SOX8 STAT2 ZNF263
6418767
chr2 228713255 rs4300818 G T
SOX8 TP53 TP63 TP73
6418768
chr2 228713391 rs370099252 T A no 6418769
chr2 228713488 rs181024101 G A
RUNX3
6418770
chr2 228713501 rs141652264 A G
RUNX3
6418771
chr2 228713556 rs376343998 T C
RUNX3 SPIB
6418772
Genes possibly regulated by vista35038[chr2:228713173-228713709]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228678558 228682272 + CCL20 ENSG00000115009.7 228678558 0.95 0.97 3211 65385
chr2 228735770 228789060 + DAW1 ENSG00000123977.5 228735770 0.99 0.83 3212 77939
Expression level of Genes
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miRNAs possibly regulated by vista35038[chr2:228713173-228713709]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results