EnhancerDB
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  3. vista35123[chr2:231815227-231815438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35123[chr2:231815227-231815438]
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Tissue distribution of vista35123
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Transcription factor that possibly regulate vista35123[chr2:231815227-231815438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 231815050 231815706 NFIC UCSC Txn Factor no Conserved 108435616
chr2 231815063 231818018 POLR2A UCSC Txn Factor no Conserved 108435617
chr2 231815081 231815610 ATF2 UCSC Txn Factor no Conserved 108435618
chr2 231815107 231815675 RUNX3 UCSC Txn Factor no Conserved 108435619
chr2 231815110 231815821 FOXM1 UCSC Txn Factor no Conserved 108435620
chr2 231815174 231815478 BATF UCSC Txn Factor no Conserved 108435621
chr2 231815192 231815522 BHLHE40 UCSC Txn Factor no Conserved 108435622
chr2 231815401 231815717 EBF1 UCSC Txn Factor no Conserved 108435623
chr2 231815217 231815235 SRF JASPAR yes 22227258
chr2 231815217 231815235 SRF JASPAR yes 81690781
chr2 231815222 231815236 GATA2 JASPAR yes 22227259
chr2 231815222 231815236 GATA2 JASPAR yes 81690782
chr2 231815224 231815232 GATA3 JASPAR yes 22227260
chr2 231815224 231815232 GATA5 JASPAR yes 22227261
chr2 231815224 231815232 GATA3 JASPAR yes 81690783
chr2 231815224 231815232 GATA5 JASPAR yes 81690784
chr2 231815224 231815238 STAT1 JASPAR yes 22227262
chr2 231815224 231815238 STAT1 JASPAR yes 81690785
chr2 231815224 231815239 STAT2 JASPAR yes 22227263
chr2 231815224 231815239 STAT2 JASPAR yes 81690786
chr2 231815228 231815233 ETS2 TRANSFAC yes 22227264
chr2 231815228 231815233 ETS2 TRANSFAC yes 81690787
chr2 231815260 231815264 YY1 TRANSFAC yes 22227265
chr2 231815260 231815264 YY1 TRANSFAC yes 81690788
chr2 231815265 231815275 TBR1 JASPAR yes 22227266
chr2 231815265 231815275 TBR1 JASPAR yes 81690789
chr2 231815275 231815285 MEF2A JASPAR yes 22227267
chr2 231815275 231815285 MEF2A JASPAR yes 81690790
chr2 231815291 231815307 SOX8 JASPAR yes 22227268
chr2 231815291 231815307 SOX8 JASPAR yes 81690791
chr2 231815311 231815315 YY1 TRANSFAC yes 22227269
chr2 231815311 231815315 YY1 TRANSFAC yes 81690792
chr2 231815330 231815348 TP63 JASPAR yes 22227270
chr2 231815330 231815348 TP63 JASPAR yes 81690793
chr2 231815331 231815346 TP53 JASPAR yes 22227271
chr2 231815331 231815346 TP53 JASPAR yes 81690794
chr2 231815339 231815351 PKNOX1 JASPAR yes 22227272
chr2 231815339 231815351 PKNOX2 JASPAR yes 22227273
chr2 231815339 231815351 TGIF1 JASPAR yes 22227274
chr2 231815339 231815351 TGIF2 JASPAR yes 22227275
chr2 231815339 231815351 PKNOX1 JASPAR yes 81690795
chr2 231815339 231815351 PKNOX2 JASPAR yes 81690796
chr2 231815339 231815351 TGIF1 JASPAR yes 81690797
chr2 231815339 231815351 TGIF2 JASPAR yes 81690798
chr2 231815356 231815362 GATA1 TRANSFAC yes 22227276
chr2 231815356 231815362 GATA1 TRANSFAC yes 81690799
chr2 231815358 231815373 FOXA1 JASPAR yes 22227277
chr2 231815358 231815373 FOXA1 JASPAR yes 81690800
chr2 231815359 231815366 NKX3-1 JASPAR yes 22227278
chr2 231815359 231815366 NKX3-1 JASPAR yes 81690801
chr2 231815365 231815375 CLOCK JASPAR yes 22227279
chr2 231815365 231815375 MAX JASPAR yes 22227280
chr2 231815365 231815375 CLOCK JASPAR yes 81690802
chr2 231815365 231815375 MAX JASPAR yes 81690803
chr2 231815367 231815372 MYC TRANSFAC yes 22227281
chr2 231815367 231815372 USF1 TRANSFAC yes 22227282
chr2 231815367 231815372 USF2 TRANSFAC yes 22227283
chr2 231815367 231815372 MYC TRANSFAC yes 81690804
chr2 231815367 231815372 USF1 TRANSFAC yes 81690805
chr2 231815367 231815372 USF2 TRANSFAC yes 81690806
chr2 231815367 231815382 FOXA1 JASPAR yes 22227284
chr2 231815367 231815382 FOXA1 JASPAR yes 81690807
chr2 231815371 231815382 FOXA1 JASPAR yes 22227285
chr2 231815371 231815382 FOXA1 JASPAR yes 81690808
chr2 231815373 231815387 TLX1 JASPAR yes 22227286
chr2 231815373 231815387 TLX1 JASPAR yes 81690809
chr2 231815391 231815408 BCL6B JASPAR yes 22227287
chr2 231815391 231815408 BCL6B JASPAR yes 81690810
chr2 231815402 231815412 GCM2 JASPAR yes 22227288
chr2 231815402 231815412 GCM2 JASPAR yes 81690811
chr2 231815435 231815451 SOX4 JASPAR yes 22227289
chr2 231815435 231815451 SOX4 JASPAR yes 81690812
SNP sites on vista35123[chr2:231815227-231815438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 231815371 rs564546129 G A
ATF2 BATF BHLHE40 CLOCK FOXA1 FOXM1 MAX MYC NFIC POLR2A RUNX3 USF1 USF2
6432268
chr2 231815383 rs7573492 G C
ATF2 BATF BHLHE40 FOXM1 NFIC POLR2A RUNX3 TLX1
6432269
chr2 231815406 rs193265150 C G
ATF2 BATF BCL6B BHLHE40 EBF1 FOXM1 GCM2 NFIC POLR2A RUNX3
6432270
Genes possibly regulated by vista35123[chr2:231815227-231815438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 231729354 231743963 + ITM2C ENSG00000135916.11 231729354 0.89 1.0 3224 14127
chr2 231772033 231825781 - GPR55 ENSG00000135898.5 231825781 0.94 0.97 3225 89657
chr2 231860836 231889770 + SPATA3 ENSG00000173699.11 231860836 1.0 1.0 3226 54602
chr2 231902205 231914434 + C2orf72 ENSG00000204128.5 231902205 0.98 0.98 3227 13233
Expression level of Genes
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miRNAs possibly regulated by vista35123[chr2:231815227-231815438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results