EnhancerDB
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  3. vista35129[chr2:231841486-231841884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35129[chr2:231841486-231841884]
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Tissue distribution of vista35129
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Transcription factor that possibly regulate vista35129[chr2:231841486-231841884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 231841298 231841594 EBF1 UCSC Txn Factor no Conserved 108435649
chr2 231841502 231841739 SRF UCSC Txn Factor no Conserved 108435650
chr2 231841502 231841813 RUNX3 UCSC Txn Factor no Conserved 108435651
chr2 231841474 231841493 CTCF JASPAR yes 22227666
chr2 231841474 231841493 CTCF JASPAR yes 81692689
chr2 231841506 231841523 RARA JASPAR yes 22227667
chr2 231841506 231841523 RARA JASPAR yes 81692690
chr2 231841507 231841523 SRF JASPAR yes 22227668
chr2 231841507 231841523 SRF JASPAR yes 81692691
chr2 231841507 231841525 SRF JASPAR yes 22227669
chr2 231841507 231841525 SRF JASPAR yes 81692692
chr2 231841508 231841520 SRF JASPAR yes 22227670
chr2 231841508 231841520 SRF JASPAR yes 81692693
chr2 231841510 231841522 SRF JASPAR yes 22227671
chr2 231841510 231841522 SRF JASPAR yes 81692694
chr2 231841513 231841517 YY1 TRANSFAC yes 22227672
chr2 231841513 231841517 YY1 TRANSFAC yes 81692695
chr2 231841550 231841565 HNF4G JASPAR yes 22227673
chr2 231841550 231841565 HNF4G JASPAR yes 81692696
chr2 231841551 231841565 NR2F1 JASPAR yes 22227674
chr2 231841551 231841565 NR2F1 JASPAR yes 81692697
chr2 231841551 231841566 HNF4A JASPAR yes 22227675
chr2 231841551 231841566 HNF4A JASPAR yes 81692698
chr2 231841556 231841569 NR2F1 JASPAR yes 22227676
chr2 231841556 231841569 NR2F1 JASPAR yes 81692699
chr2 231841560 231841564 ESR1 TRANSFAC yes 22227677
chr2 231841560 231841564 ESR1 TRANSFAC yes 81692700
chr2 231841567 231841581 TCF7L2 JASPAR yes 22227678
chr2 231841567 231841581 TCF7L2 JASPAR yes 81692701
chr2 231841583 231841599 RFX3 JASPAR yes 22227679
chr2 231841583 231841599 RFX4 JASPAR yes 22227680
chr2 231841583 231841599 RFX3 JASPAR yes 81692702
chr2 231841583 231841599 RFX4 JASPAR yes 81692703
chr2 231841584 231841603 RFX2 JASPAR yes 22227681
chr2 231841584 231841603 RFX2 JASPAR yes 81692704
chr2 231841597 231841617 PPARG JASPAR yes 22227682
chr2 231841597 231841617 PPARG JASPAR yes 81692705
chr2 231841604 231841619 IRF9 JASPAR yes 22227683
chr2 231841604 231841619 IRF9 JASPAR yes 81692706
chr2 231841605 231841619 ONECUT3 JASPAR yes 22227684
chr2 231841605 231841619 ONECUT3 JASPAR yes 81692707
chr2 231841611 231841615 H1TF2 TRANSFAC yes 22227685
chr2 231841611 231841615 NFE TRANSFAC yes 22227686
chr2 231841611 231841615 SRF TRANSFAC yes 22227687
chr2 231841611 231841615 H1TF2 TRANSFAC yes 81692708
chr2 231841611 231841615 NFE TRANSFAC yes 81692709
chr2 231841611 231841615 SRF TRANSFAC yes 81692710
chr2 231841615 231841633 SRF JASPAR yes 22227688
chr2 231841615 231841633 SRF JASPAR yes 81692711
chr2 231841617 231841633 SRF JASPAR yes 22227689
chr2 231841617 231841633 SRF JASPAR yes 81692712
chr2 231841618 231841630 SRF JASPAR yes 22227690
chr2 231841618 231841630 SRF JASPAR yes 81692713
chr2 231841620 231841632 SRF JASPAR yes 22227691
chr2 231841620 231841632 SRF JASPAR yes 81692714
chr2 231841626 231841640 TLX1 JASPAR yes 22227692
chr2 231841626 231841640 TLX1 JASPAR yes 81692715
chr2 231841626 231841641 ESR2 JASPAR yes 22227693
chr2 231841626 231841641 ESR2 JASPAR yes 81692716
chr2 231841632 231841650 ESR2 JASPAR yes 22227694
chr2 231841632 231841650 ESR2 JASPAR yes 81692717
chr2 231841664 231841679 ESR2 JASPAR yes 22227695
chr2 231841664 231841679 ESR2 JASPAR yes 81692718
chr2 231841665 231841670 H4TF1 TRANSFAC yes 22227696
chr2 231841665 231841670 H4TF1 TRANSFAC yes 81692719
chr2 231841675 231841695 RREB1 JASPAR yes 22227697
chr2 231841675 231841695 RREB1 JASPAR yes 81692720
chr2 231841676 231841697 ZNF263 JASPAR yes 22227698
chr2 231841676 231841697 ZNF263 JASPAR yes 81692721
chr2 231841679 231841699 RREB1 JASPAR yes 22227699
chr2 231841679 231841699 RREB1 JASPAR yes 81692722
chr2 231841687 231841693 SP1 TRANSFAC yes 22227700
chr2 231841687 231841693 SP1 TRANSFAC yes 81692723
chr2 231841687 231841697 SP1 JASPAR yes 22227701
chr2 231841687 231841697 SP1 JASPAR yes 81692724
chr2 231841695 231841699 NFE TRANSFAC yes 22227702
chr2 231841695 231841699 NFE TRANSFAC yes 81692725
chr2 231841701 231841714 SMAD2 JASPAR yes 22227703
chr2 231841701 231841714 SMAD2 JASPAR yes 81692726
chr2 231841705 231841709 NFE TRANSFAC yes 22227704
chr2 231841705 231841709 NFE TRANSFAC yes 81692727
chr2 231841705 231841718 SMAD2 JASPAR yes 22227705
chr2 231841705 231841718 SMAD2 JASPAR yes 81692728
chr2 231841742 231841756 SPI1 JASPAR yes 22227706
chr2 231841742 231841756 SPI1 JASPAR yes 81692729
chr2 231841744 231841758 GATA2 JASPAR yes 22227707
chr2 231841744 231841758 GATA2 JASPAR yes 81692730
chr2 231841748 231841756 GATA3 JASPAR yes 22227708
chr2 231841748 231841756 GATA5 JASPAR yes 22227709
chr2 231841748 231841756 GATA3 JASPAR yes 81692731
chr2 231841748 231841756 GATA5 JASPAR yes 81692732
chr2 231841777 231841792 FOXP1 JASPAR yes 22227710
chr2 231841777 231841792 FOXP1 JASPAR yes 81692733
chr2 231841780 231841791 FOXP2 JASPAR yes 22227711
chr2 231841780 231841791 FOXP2 JASPAR yes 81692734
chr2 231841782 231841791 SRY JASPAR yes 22227712
chr2 231841782 231841791 SRY JASPAR yes 81692735
chr2 231841798 231841802 H4TF2 TRANSFAC yes 22227713
chr2 231841798 231841802 H4TF2 TRANSFAC yes 81692736
chr2 231841802 231841810 EHF JASPAR yes 22227714
chr2 231841802 231841810 EHF JASPAR yes 81692737
chr2 231841808 231841821 POU2F2 JASPAR yes 22227715
chr2 231841808 231841821 POU2F2 JASPAR yes 81692738
chr2 231841831 231841836 GATA2 JASPAR yes 22227716
chr2 231841831 231841836 GATA2 JASPAR yes 81692739
chr2 231841831 231841844 ELF1 JASPAR yes 22227717
chr2 231841831 231841844 ELF1 JASPAR yes 81692740
chr2 231841832 231841845 ELF3 JASPAR yes 22227718
chr2 231841832 231841845 ELF3 JASPAR yes 81692741
chr2 231841834 231841841 ETS1 TRANSFAC yes 22227719
chr2 231841834 231841841 ETS1 TRANSFAC yes 81692742
chr2 231841848 231841860 PKNOX1 JASPAR yes 22227720
chr2 231841848 231841860 PKNOX2 JASPAR yes 22227721
chr2 231841848 231841860 TGIF1 JASPAR yes 22227722
chr2 231841848 231841860 TGIF2 JASPAR yes 22227723
chr2 231841848 231841860 PKNOX1 JASPAR yes 81692743
chr2 231841848 231841860 PKNOX2 JASPAR yes 81692744
chr2 231841848 231841860 TGIF1 JASPAR yes 81692745
chr2 231841848 231841860 TGIF2 JASPAR yes 81692746
chr2 231841854 231841858 NFE TRANSFAC yes 22227724
chr2 231841854 231841858 NFE TRANSFAC yes 81692747
SNP sites on vista35129[chr2:231841486-231841884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 231841526 rs6714334 C T
EBF1 RUNX3 SRF
6432489
chr2 231841591 rs77277206 A T
EBF1 RFX2 RFX3 RFX4 RUNX3 SRF
6432490
chr2 231841620 rs73099133 C G,T
RUNX3 SRF
6432491
chr2 231841635 rs13387070 G A
ESR2 RUNX3 SRF TLX1
6432492
chr2 231841642 rs369295972 G A
ESR2 RUNX3 SRF
6432493
chr2 231841652 rs114725826 A C
RUNX3 SRF
6432494
Genes possibly regulated by vista35129[chr2:231841486-231841884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 231772033 231825781 - GPR55 ENSG00000135898.5 231825781 0.94 0.97 3225 84295
chr2 231860836 231889770 + SPATA3 ENSG00000173699.11 231860836 1.0 1.0 3226 81048
chr2 231902205 231914434 + C2orf72 ENSG00000204128.5 231902205 0.98 0.98 3227 39679
chr2 231921578 232037541 + PSMD1 ENSG00000173692.8 231921578 0.74 0.99 3228 20306
Expression level of Genes
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miRNAs possibly regulated by vista35129[chr2:231841486-231841884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results