EnhancerDB
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  3. vista3513[chr1:158075201-158075434]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3513[chr1:158075201-158075434]
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Tissue distribution of vista3513
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Transcription factor that possibly regulate vista3513[chr1:158075201-158075434]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 158075188 158075203 LEF1 JASPAR yes 32466518
chr1 158075188 158075203 LEF1 JASPAR yes 118380365
chr1 158075205 158075215 SP1 JASPAR yes 32466520
chr1 158075205 158075215 SP1 JASPAR yes 118380366
chr1 158075246 158075251 ETS2 TRANSFAC yes 32466521
chr1 158075246 158075251 ETS2 TRANSFAC yes 118380367
chr1 158075252 158075262 ID4 JASPAR yes 32466522
chr1 158075252 158075262 TCF3 JASPAR yes 32466523
chr1 158075252 158075262 TCF4 JASPAR yes 32466524
chr1 158075252 158075262 ID4 JASPAR yes 118380368
chr1 158075252 158075262 TCF3 JASPAR yes 118380369
chr1 158075252 158075262 TCF4 JASPAR yes 118380370
chr1 158075253 158075262 SNAI2 JASPAR yes 32466525
chr1 158075253 158075262 SNAI2 JASPAR yes 118380371
chr1 158075254 158075259 USF2 TRANSFAC yes 32466526
chr1 158075254 158075259 USF2 TRANSFAC yes 118380372
chr1 158075274 158075280 HiNF-A TRANSFAC yes 32466527
chr1 158075274 158075280 HiNF-A TRANSFAC yes 118380373
chr1 158075301 158075313 TEAD1 JASPAR yes 32466528
chr1 158075301 158075313 TEAD1 JASPAR yes 118380374
chr1 158075303 158075308 ETS2 TRANSFAC yes 32466529
chr1 158075303 158075308 ETS2 TRANSFAC yes 118380375
chr1 158075303 158075313 TEAD1 JASPAR yes 32466530
chr1 158075303 158075313 TEAD4 JASPAR yes 32466531
chr1 158075303 158075313 TEAD1 JASPAR yes 118380376
chr1 158075303 158075313 TEAD4 JASPAR yes 118380377
chr1 158075304 158075312 TEAD3 JASPAR yes 32466532
chr1 158075304 158075312 TEAD3 JASPAR yes 118380378
chr1 158075307 158075322 RFX5 JASPAR yes 32466533
chr1 158075307 158075322 RFX5 JASPAR yes 118380379
chr1 158075319 158075340 ZNF263 JASPAR yes 32466534
chr1 158075319 158075340 ZNF263 JASPAR yes 118380380
chr1 158075389 158075406 RARA JASPAR yes 32466535
chr1 158075389 158075406 RARA JASPAR yes 118380381
chr1 158075394 158075399 MYB TRANSFAC yes 32466536
chr1 158075394 158075399 MYB TRANSFAC yes 118380382
chr1 158075411 158075419 HOXA5 JASPAR yes 32466537
chr1 158075411 158075419 HOXA5 JASPAR yes 118380383
chr1 158075419 158075434 NR2C2 JASPAR yes 32466538
chr1 158075419 158075434 NR2C2 JASPAR yes 118380384
chr1 158075432 158075443 HOXC12 JASPAR yes 32466539
chr1 158075432 158075443 HOXC12 JASPAR yes 118380385
SNP sites on vista3513[chr1:158075201-158075434]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 158075252 rs7417579 G A,C
ID4 TCF3 TCF4
658617
chr1 158075399 rs79690291 A C
MYB RARA
658618
chr1 158075432 rs74120559 T A
HOXC12 NR2C2
658619
chr1 158075433 rs74120560 G T
HOXC12 NR2C2
658620
Genes possibly regulated by vista3513[chr1:158075201-158075434]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 158149737 158154686 + CD1D ENSG00000158473.6 158149737 0.92 0.93 1398 25697
Expression level of Genes
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miRNAs possibly regulated by vista3513[chr1:158075201-158075434]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results