EnhancerDB
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  3. vista35139[chr2:232044610-232045091]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35139[chr2:232044610-232045091]
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Tissue distribution of vista35139
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Transcription factor that possibly regulate vista35139[chr2:232044610-232045091]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 232044655 232044979 RUNX3 UCSC Txn Factor no Conserved 108435664
chr2 232044640 232044643 MYB TRANSFAC yes 22228171
chr2 232044640 232044643 MYB TRANSFAC yes 81703258
chr2 232044660 232044665 ETS2 TRANSFAC yes 22228172
chr2 232044660 232044665 ETS2 TRANSFAC yes 81703259
chr2 232044660 232044668 FEV JASPAR yes 22228173
chr2 232044660 232044668 FEV JASPAR yes 81703260
chr2 232044660 232044678 NR3C1 JASPAR yes 22228174
chr2 232044660 232044678 NR3C1 JASPAR yes 81703261
chr2 232044661 232044672 NFKB1 JASPAR yes 22228175
chr2 232044661 232044672 NFKB1 JASPAR yes 81703262
chr2 232044663 232044673 TEAD4 JASPAR yes 22228176
chr2 232044663 232044673 TEAD4 JASPAR yes 81703263
chr2 232044667 232044672 ETS2 TRANSFAC yes 22228177
chr2 232044667 232044672 ETS2 TRANSFAC yes 81703264
chr2 232044669 232044677 EHF JASPAR yes 22228178
chr2 232044669 232044677 EHF JASPAR yes 81703265
chr2 232044671 232044676 ETS2 TRANSFAC yes 22228179
chr2 232044671 232044676 ETS2 TRANSFAC yes 81703266
chr2 232044674 232044680 LEF1 TRANSFAC yes 22228180
chr2 232044674 232044680 SOX10 JASPAR yes 22228181
chr2 232044674 232044680 LEF1 TRANSFAC yes 81703267
chr2 232044674 232044680 SOX10 JASPAR yes 81703268
chr2 232044683 232044691 OTX2 JASPAR yes 22228182
chr2 232044683 232044691 OTX2 JASPAR yes 81703269
chr2 232044712 232044728 T JASPAR yes 22228183
chr2 232044712 232044728 T JASPAR yes 81703270
chr2 232044722 232044726 NFE TRANSFAC yes 22228184
chr2 232044722 232044726 NFE TRANSFAC yes 81703271
chr2 232044729 232044735 MZF1 JASPAR yes 22228185
chr2 232044729 232044735 MZF1 JASPAR yes 81703272
chr2 232044768 232044777 JDP2 JASPAR yes 22228186
chr2 232044768 232044777 JDP2 JASPAR yes 81703273
chr2 232044769 232044779 MAX JASPAR yes 22228187
chr2 232044769 232044779 MAX JASPAR yes 81703274
chr2 232044770 232044780 NEUROG2 JASPAR yes 22228188
chr2 232044770 232044780 NEUROG2 JASPAR yes 81703275
chr2 232044798 232044813 RUNX2 JASPAR yes 22228189
chr2 232044798 232044813 RUNX2 JASPAR yes 81703276
chr2 232044801 232044812 RUNX1 JASPAR yes 22228190
chr2 232044801 232044812 RUNX1 JASPAR yes 81703277
chr2 232044802 232044812 RUNX3 JASPAR yes 22228191
chr2 232044802 232044812 RUNX3 JASPAR yes 81703278
chr2 232044803 232044812 RUNX2 JASPAR yes 22228192
chr2 232044803 232044812 RUNX2 JASPAR yes 81703279
chr2 232044828 232044834 TCF4 TRANSFAC yes 22228193
chr2 232044828 232044834 TCF4 TRANSFAC yes 81703280
chr2 232044838 232044841 MYB TRANSFAC yes 22228194
chr2 232044838 232044841 MYB TRANSFAC yes 81703281
chr2 232044843 232044858 MEF2C JASPAR yes 22228195
chr2 232044843 232044858 MEF2C JASPAR yes 81703282
chr2 232044844 232044859 MEF2A JASPAR yes 22228196
chr2 232044844 232044859 MEF2A JASPAR yes 81703283
chr2 232044845 232044857 MEF2A JASPAR yes 22228197
chr2 232044845 232044857 MEF2B JASPAR yes 22228198
chr2 232044845 232044857 MEF2D JASPAR yes 22228199
chr2 232044845 232044857 MEF2A JASPAR yes 81703284
chr2 232044845 232044857 MEF2B JASPAR yes 81703285
chr2 232044845 232044857 MEF2D JASPAR yes 81703286
chr2 232044846 232044856 MEF2A JASPAR yes 22228200
chr2 232044846 232044856 MEF2A JASPAR yes 81703287
chr2 232044846 232044858 FOXI1 JASPAR yes 22228201
chr2 232044846 232044858 FOXI1 JASPAR yes 81703288
chr2 232044847 232044851 TEAD2 TRANSFAC yes 22228202
chr2 232044847 232044851 TEAD2 TRANSFAC yes 81703289
chr2 232044847 232044852 TBP TRANSFAC yes 22228203
chr2 232044847 232044852 TBP TRANSFAC yes 81703290
chr2 232044847 232044853 TMF TRANSFAC yes 22228204
chr2 232044847 232044853 TMF TRANSFAC yes 81703291
chr2 232044862 232044865 MYB TRANSFAC yes 22228205
chr2 232044862 232044865 MYB TRANSFAC yes 81703292
chr2 232044866 232044884 TP63 JASPAR yes 22228206
chr2 232044866 232044884 TP63 JASPAR yes 81703293
chr2 232044883 232044903 RREB1 JASPAR yes 22228207
chr2 232044883 232044903 RREB1 JASPAR yes 81703294
chr2 232044892 232044898 MZF1 JASPAR yes 22228208
chr2 232044892 232044898 MZF1 JASPAR yes 81703295
chr2 232044906 232044917 DMRT3 JASPAR yes 22228209
chr2 232044906 232044917 DMRT3 JASPAR yes 81703296
chr2 232044931 232044944 DUXA JASPAR yes 22228210
chr2 232044931 232044944 DUXA JASPAR yes 81703297
chr2 232044932 232044943 DUX4 JASPAR yes 22228211
chr2 232044932 232044943 DUX4 JASPAR yes 81703298
chr2 232044964 232044985 REST JASPAR yes 22228212
chr2 232044964 232044985 REST JASPAR yes 81703299
chr2 232044967 232044978 ESRRA JASPAR yes 22228213
chr2 232044967 232044978 ESRRB JASPAR yes 22228214
chr2 232044967 232044978 ESRRA JASPAR yes 81703300
chr2 232044967 232044978 ESRRB JASPAR yes 81703301
chr2 232044968 232044983 LEF1 JASPAR yes 22228215
chr2 232044968 232044983 LEF1 JASPAR yes 81703302
chr2 232045007 232045016 ZEB1 JASPAR yes 22228216
chr2 232045007 232045016 ZEB1 JASPAR yes 81703303
chr2 232045008 232045018 TCF4 JASPAR yes 22228217
chr2 232045008 232045018 TCF4 JASPAR yes 81703304
chr2 232045010 232045015 USF2 TRANSFAC yes 22228218
chr2 232045010 232045015 USF2 TRANSFAC yes 81703305
chr2 232045013 232045026 JUN JASPAR yes 22228219
chr2 232045013 232045026 JUN JASPAR yes 81703306
chr2 232045027 232045039 FOXI1 JASPAR yes 22228220
chr2 232045027 232045039 FOXI1 JASPAR yes 81703307
chr2 232045030 232045034 YY1 TRANSFAC yes 22228221
chr2 232045030 232045034 YY1 TRANSFAC yes 81703308
chr2 232045031 232045043 FOXI1 JASPAR yes 22228222
chr2 232045031 232045043 FOXI1 JASPAR yes 81703309
chr2 232045031 232045046 FOXP1 JASPAR yes 22228223
chr2 232045031 232045046 FOXP1 JASPAR yes 81703310
chr2 232045032 232045043 FOXP2 JASPAR yes 22228224
chr2 232045032 232045043 FOXP2 JASPAR yes 81703311
chr2 232045032 232045044 FOXC2 JASPAR yes 22228225
chr2 232045032 232045044 FOXC2 JASPAR yes 81703312
chr2 232045032 232045046 FOXF2 JASPAR yes 22228226
chr2 232045032 232045046 FOXF2 JASPAR yes 81703313
chr2 232045033 232045041 FOXG1 JASPAR yes 22228227
chr2 232045033 232045041 FOXO3 JASPAR yes 22228228
chr2 232045033 232045041 FOXG1 JASPAR yes 81703314
chr2 232045033 232045041 FOXO3 JASPAR yes 81703315
chr2 232045034 232045044 HOXA13 JASPAR yes 22228229
chr2 232045034 232045044 HOXA13 JASPAR yes 81703316
chr2 232045034 232045045 FOXH1 JASPAR yes 22228230
chr2 232045034 232045045 HOXA10 JASPAR yes 22228231
chr2 232045034 232045045 FOXH1 JASPAR yes 81703317
chr2 232045034 232045045 HOXA10 JASPAR yes 81703318
chr2 232045035 232045044 CDX1 JASPAR yes 22228232
chr2 232045035 232045044 CDX1 JASPAR yes 81703319
chr2 232045035 232045046 CDX2 JASPAR yes 22228233
chr2 232045035 232045046 CDX2 JASPAR yes 81703320
chr2 232045040 232045053 SMAD2 JASPAR yes 22228234
chr2 232045040 232045053 SMAD2 JASPAR yes 81703321
chr2 232045044 232045048 NFE TRANSFAC yes 22228235
chr2 232045044 232045048 NFE TRANSFAC yes 81703322
chr2 232045052 232045062 GSC JASPAR yes 22228236
chr2 232045052 232045062 GSC JASPAR yes 81703323
chr2 232045053 232045061 OTX1 JASPAR yes 22228237
chr2 232045053 232045061 OTX2 JASPAR yes 22228238
chr2 232045053 232045061 OTX1 JASPAR yes 81703324
chr2 232045053 232045061 OTX2 JASPAR yes 81703325
chr2 232045069 232045079 NOTO JASPAR yes 22228239
chr2 232045069 232045079 NOTO JASPAR yes 81703326
chr2 232045075 232045090 AR JASPAR yes 22228240
chr2 232045075 232045090 AR JASPAR yes 81703327
chr2 232045086 232045101 FOXP1 JASPAR yes 22228241
chr2 232045086 232045101 FOXP1 JASPAR yes 81703328
SNP sites on vista35139[chr2:232044610-232045091]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 232044654 rs6724181 G A no 6433508
chr2 232044684 rs6755467 A C,T
OTX2 RUNX3
6433509
chr2 232044748 rs17586554 C T
RUNX3
6433510
chr2 232044864 rs531433818 A G
MYB RUNX3
6433511
chr2 232044965 rs142649015 A G
REST RUNX3
6433512
chr2 232045023 rs115320520 T G
JUN
6433513
chr2 232045064 rs6727422 C T no 6433514
Genes possibly regulated by vista35139[chr2:232044610-232045091]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 231972944 231989832 - HTR2B ENSG00000135914.5 231989832 0.9 0.99 3229 45222
chr2 232063260 232239548 + ARMC9 ENSG00000135931.13 232063260 0.82 1.0 3230 81831
Expression level of Genes
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miRNAs possibly regulated by vista35139[chr2:232044610-232045091]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 232227475 232227496 + hsa-miR-4777-3p MIMAT0019935 232063344 8.1113965120995e-05 0.0 0.0 1018
Expression level of miRNAs
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