EnhancerDB
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  3. vista3520[chr1:158253654-158254229]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3520[chr1:158253654-158254229]
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Tissue distribution of vista3520
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Transcription factor that possibly regulate vista3520[chr1:158253654-158254229]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 158253846 158254068 RUNX3 UCSC Txn Factor no Conserved 107838387
chr1 158253647 158253665 SRF JASPAR yes 32472870
chr1 158253647 158253665 SRF JASPAR yes 118380651
chr1 158253652 158253662 GSX2 JASPAR yes 32472872
chr1 158253652 158253662 GSX2 JASPAR yes 118380652
chr1 158253653 158253661 BSX JASPAR yes 32472873
chr1 158253653 158253661 BSX JASPAR yes 118380653
chr1 158253658 158253663 ETS2 TRANSFAC yes 32472874
chr1 158253658 158253663 ETS2 TRANSFAC yes 118380654
chr1 158253683 158253687 YY1 TRANSFAC yes 32472875
chr1 158253683 158253687 YY1 TRANSFAC yes 118380655
chr1 158253687 158253699 PROX1 JASPAR yes 32472876
chr1 158253687 158253699 PROX1 JASPAR yes 118380656
chr1 158253717 158253728 E2F6 JASPAR yes 32472877
chr1 158253717 158253728 E2F6 JASPAR yes 118380657
chr1 158253719 158253740 ZNF263 JASPAR yes 32472878
chr1 158253719 158253740 ZNF263 JASPAR yes 118380658
chr1 158253733 158253740 SPIB JASPAR yes 32472879
chr1 158253733 158253740 SPIB JASPAR yes 118380659
chr1 158253770 158253788 MAFF JASPAR yes 32472880
chr1 158253770 158253788 MAFF JASPAR yes 118380660
chr1 158253771 158253786 MAFK JASPAR yes 32472881
chr1 158253771 158253786 MAFK JASPAR yes 118380661
chr1 158253785 158253803 MAFF JASPAR yes 32472882
chr1 158253785 158253803 MAFF JASPAR yes 118380662
chr1 158253786 158253801 MAFK JASPAR yes 32472883
chr1 158253786 158253801 MAFK JASPAR yes 118380663
chr1 158253789 158253793 ESR1 TRANSFAC yes 32472884
chr1 158253789 158253793 ESR1 TRANSFAC yes 118380664
chr1 158253790 158253801 NRL JASPAR yes 32472885
chr1 158253790 158253801 NRL JASPAR yes 118380665
chr1 158253795 158253806 FLI1 JASPAR yes 32472886
chr1 158253795 158253806 FLI1 JASPAR yes 118380666
chr1 158253796 158253800 YY1 TRANSFAC yes 32472887
chr1 158253796 158253800 YY1 TRANSFAC yes 118380667
chr1 158253796 158253807 ETV2 JASPAR yes 32472888
chr1 158253796 158253807 ETV2 JASPAR yes 118380668
chr1 158253797 158253805 FEV JASPAR yes 32472889
chr1 158253797 158253805 FEV JASPAR yes 118380669
chr1 158253799 158253806 SPIB JASPAR yes 32472890
chr1 158253799 158253806 SPIB JASPAR yes 118380670
chr1 158253808 158253829 IRF1 JASPAR yes 32472891
chr1 158253808 158253829 IRF1 JASPAR yes 118380671
chr1 158253814 158253829 MEF2C JASPAR yes 32472892
chr1 158253814 158253829 MEF2C JASPAR yes 118380672
chr1 158253815 158253827 HNF1B JASPAR yes 32472893
chr1 158253815 158253827 MEF2A JASPAR yes 32472894
chr1 158253815 158253827 MEF2D JASPAR yes 32472895
chr1 158253815 158253827 HNF1B JASPAR yes 118380673
chr1 158253815 158253827 MEF2A JASPAR yes 118380674
chr1 158253815 158253827 MEF2D JASPAR yes 118380675
chr1 158253815 158253831 POU4F3 JASPAR yes 32472896
chr1 158253815 158253831 POU4F3 JASPAR yes 118380676
chr1 158253816 158253826 MEF2A JASPAR yes 32472897
chr1 158253816 158253826 MEF2A JASPAR yes 118380677
chr1 158253819 158253823 YY1 TRANSFAC yes 32472898
chr1 158253819 158253823 YY1 TRANSFAC yes 118380678
chr1 158253837 158253852 HSF1 JASPAR yes 32472899
chr1 158253837 158253852 HSF1 JASPAR yes 118380679
chr1 158253838 158253851 HSF2 JASPAR yes 32472900
chr1 158253838 158253851 HSF4 JASPAR yes 32472901
chr1 158253838 158253851 HSF2 JASPAR yes 118380680
chr1 158253838 158253851 HSF4 JASPAR yes 118380681
chr1 158253874 158253880 LEF1 TRANSFAC yes 32472902
chr1 158253874 158253880 SOX10 JASPAR yes 32472903
chr1 158253874 158253880 LEF1 TRANSFAC yes 118380682
chr1 158253874 158253880 SOX10 JASPAR yes 118380683
chr1 158253877 158253888 CEBPB JASPAR yes 32472904
chr1 158253877 158253888 CEBPB JASPAR yes 118380684
chr1 158253878 158253889 CEBPA JASPAR yes 32472905
chr1 158253878 158253889 CEBPA JASPAR yes 118380685
chr1 158253882 158253903 IRF1 JASPAR yes 32472906
chr1 158253882 158253903 IRF1 JASPAR yes 118380686
chr1 158253883 158253887 H1TF2 TRANSFAC yes 32472907
chr1 158253883 158253887 NFE TRANSFAC yes 32472908
chr1 158253883 158253887 SRF TRANSFAC yes 32472909
chr1 158253883 158253887 H1TF2 TRANSFAC yes 118380687
chr1 158253883 158253887 NFE TRANSFAC yes 118380688
chr1 158253883 158253887 SRF TRANSFAC yes 118380689
chr1 158253885 158253896 ETV2 JASPAR yes 32472910
chr1 158253885 158253896 ETV2 JASPAR yes 118380690
chr1 158253885 158253898 ELF1 JASPAR yes 32472911
chr1 158253885 158253898 ELF1 JASPAR yes 118380691
chr1 158253885 158253899 SPIC JASPAR yes 32472912
chr1 158253885 158253899 SPIC JASPAR yes 118380692
chr1 158253886 158253894 FEV JASPAR yes 32472913
chr1 158253886 158253894 FEV JASPAR yes 118380693
chr1 158253888 158253895 SPIB JASPAR yes 32472914
chr1 158253888 158253895 SPIB JASPAR yes 118380694
chr1 158253889 158253910 ZNF263 JASPAR yes 32472915
chr1 158253889 158253910 ZNF263 JASPAR yes 118380695
chr1 158253926 158253937 HOXA10 JASPAR yes 32472916
chr1 158253926 158253937 HOXA10 JASPAR yes 118380696
chr1 158253927 158253936 CDX1 JASPAR yes 32472917
chr1 158253927 158253936 CDX1 JASPAR yes 118380697
chr1 158253927 158253938 CDX2 JASPAR yes 32472918
chr1 158253927 158253938 CDX2 JASPAR yes 118380698
chr1 158253947 158253962 RUNX2 JASPAR yes 32472919
chr1 158253947 158253962 RUNX2 JASPAR yes 118380699
chr1 158253959 158253970 TBX20 JASPAR yes 32472920
chr1 158253959 158253970 TBX20 JASPAR yes 118380700
chr1 158253961 158253969 TBX5 JASPAR yes 32472921
chr1 158253961 158253969 TBX5 JASPAR yes 118380701
chr1 158253974 158253980 TCF4 TRANSFAC yes 32472922
chr1 158253974 158253980 TCF4 TRANSFAC yes 118380702
chr1 158253999 158254017 IRF2 JASPAR yes 32472923
chr1 158253999 158254017 IRF2 JASPAR yes 118380703
chr1 158254000 158254012 IRF1 JASPAR yes 32472924
chr1 158254000 158254012 IRF1 JASPAR yes 118380704
chr1 158254014 158254028 RXRB JASPAR yes 32472925
chr1 158254014 158254028 RXRG JASPAR yes 32472926
chr1 158254014 158254028 RXRB JASPAR yes 118380705
chr1 158254014 158254028 RXRG JASPAR yes 118380706
chr1 158254021 158254033 BHLHE23 JASPAR yes 32472927
chr1 158254021 158254033 PKNOX1 JASPAR yes 32472928
chr1 158254021 158254033 PKNOX2 JASPAR yes 32472929
chr1 158254021 158254033 TGIF1 JASPAR yes 32472930
chr1 158254021 158254033 TGIF2 JASPAR yes 32472931
chr1 158254021 158254033 BHLHE23 JASPAR yes 118380707
chr1 158254021 158254033 PKNOX1 JASPAR yes 118380708
chr1 158254021 158254033 PKNOX2 JASPAR yes 118380709
chr1 158254021 158254033 TGIF1 JASPAR yes 118380710
chr1 158254021 158254033 TGIF2 JASPAR yes 118380711
chr1 158254022 158254032 NEUROD2 JASPAR yes 32472932
chr1 158254022 158254032 OLIG1 JASPAR yes 32472933
chr1 158254022 158254032 OLIG2 JASPAR yes 32472934
chr1 158254022 158254032 NEUROD2 JASPAR yes 118380712
chr1 158254022 158254032 OLIG1 JASPAR yes 118380713
chr1 158254022 158254032 OLIG2 JASPAR yes 118380714
chr1 158254026 158254034 FOXL1 JASPAR yes 32472935
chr1 158254026 158254034 FOXL1 JASPAR yes 118380715
chr1 158254040 158254044 ESR1 TRANSFAC yes 32472936
chr1 158254040 158254044 ESR1 TRANSFAC yes 118380716
chr1 158254055 158254066 FOXH1 JASPAR yes 32472937
chr1 158254055 158254066 FOXH1 JASPAR yes 118380717
chr1 158254056 158254062 ZNF354C JASPAR yes 32472938
chr1 158254056 158254062 ZNF354C JASPAR yes 118380718
chr1 158254071 158254085 JUN JASPAR yes 32472939
chr1 158254071 158254085 JUN JASPAR yes 118380719
chr1 158254074 158254085 FOSL2 JASPAR yes 32472940
chr1 158254074 158254085 JUNB JASPAR yes 32472941
chr1 158254074 158254085 FOSL2 JASPAR yes 118380720
chr1 158254074 158254085 JUNB JASPAR yes 118380721
chr1 158254075 158254086 FOS JASPAR yes 32472942
chr1 158254075 158254086 FOSL1 JASPAR yes 32472943
chr1 158254075 158254086 JUND JASPAR yes 32472944
chr1 158254075 158254086 NFE2 JASPAR yes 32472945
chr1 158254075 158254086 FOS JASPAR yes 118380722
chr1 158254075 158254086 FOSL1 JASPAR yes 118380723
chr1 158254075 158254086 JUND JASPAR yes 118380724
chr1 158254075 158254086 NFE2 JASPAR yes 118380725
chr1 158254076 158254083 JUN TRANSFAC yes 32472946
chr1 158254076 158254083 JUN TRANSFAC yes 118380726
chr1 158254076 158254085 JDP2 JASPAR yes 32472947
chr1 158254076 158254085 JDP2 JASPAR yes 118380727
chr1 158254076 158254087 FOSL2 JASPAR yes 32472948
chr1 158254076 158254087 JUNB JASPAR yes 32472949
chr1 158254076 158254087 FOSL2 JASPAR yes 118380728
chr1 158254076 158254087 JUNB JASPAR yes 118380729
chr1 158254076 158254090 JUN JASPAR yes 32472950
chr1 158254076 158254090 JUN JASPAR yes 118380730
chr1 158254143 158254157 IRF8 JASPAR yes 32472951
chr1 158254143 158254157 IRF8 JASPAR yes 118380731
chr1 158254153 158254161 HOXA5 JASPAR yes 32472952
chr1 158254153 158254161 HOXA5 JASPAR yes 118380732
chr1 158254166 158254170 YY1 TRANSFAC yes 32472953
chr1 158254166 158254170 YY1 TRANSFAC yes 118380733
chr1 158254170 158254185 SCRT1 JASPAR yes 32472954
chr1 158254170 158254185 SCRT1 JASPAR yes 118380734
chr1 158254175 158254190 RFX5 JASPAR yes 32472955
chr1 158254175 158254190 RFX5 JASPAR yes 118380735
chr1 158254183 158254188 TFAP2A TRANSFAC yes 32472956
chr1 158254183 158254188 TFAP2A TRANSFAC yes 118380736
chr1 158254183 158254189 MZF1 JASPAR yes 32472957
chr1 158254183 158254189 MZF1 JASPAR yes 118380737
chr1 158254188 158254196 HOXA5 JASPAR yes 32472958
chr1 158254188 158254196 HOXA5 JASPAR yes 118380738
chr1 158254197 158254201 YY1 TRANSFAC yes 32472959
chr1 158254197 158254201 YY1 TRANSFAC yes 118380739
chr1 158254201 158254204 MYB TRANSFAC yes 32472960
chr1 158254201 158254204 MYB TRANSFAC yes 118380740
chr1 158254207 158254225 MAFF JASPAR yes 32472961
chr1 158254207 158254225 MAFF JASPAR yes 118380741
chr1 158254209 158254220 NRL JASPAR yes 32472962
chr1 158254209 158254220 NRL JASPAR yes 118380742
chr1 158254209 158254224 MAFK JASPAR yes 32472963
chr1 158254209 158254224 MAFK JASPAR yes 118380743
chr1 158254210 158254216 TCF4 TRANSFAC yes 32472964
chr1 158254210 158254216 TCF4 TRANSFAC yes 118380744
chr1 158254223 158254231 HOXA5 JASPAR yes 32472965
chr1 158254223 158254231 HOXA5 JASPAR yes 118380745
SNP sites on vista3520[chr1:158253654-158254229]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 158253721 rs563351538 TC T
E2F6 ZNF263
659331
chr1 158253841 rs140578176 C G
HSF1 HSF2 HSF4
659332
chr1 158253865 rs6656732 G A
RUNX3
659333
chr1 158254175 rs139828003 A T
RFX5 SCRT1
659334
Genes possibly regulated by vista3520[chr1:158253654-158254229]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 158223927 158228059 + CD1A ENSG00000158477.6 158223927 1.0 0.98 1399 70273
chr1 158259576 158263420 + CD1C ENSG00000158481.8 158259576 0.99 0.99 1400 94653
chr1 158297741 158301321 - CD1B ENSG00000158485.6 158301321 1.0 1.0 1401 52908
chr1 158323254 158327343 + CD1E ENSG00000158488.11 158323254 1.0 1.0 1402 30975
Expression level of Genes
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miRNAs possibly regulated by vista3520[chr1:158253654-158254229]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results