EnhancerDB
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  3. vista35209[chr2:233927963-233928349]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35209[chr2:233927963-233928349]
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Tissue distribution of vista35209
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Transcription factor that possibly regulate vista35209[chr2:233927963-233928349]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 233927638 233928597 POLR2A UCSC Txn Factor no Conserved 108435778
chr2 233928043 233928353 POU2F2 UCSC Txn Factor no Conserved 108435779
chr2 233928135 233928471 RFX5 UCSC Txn Factor no Conserved 108435780
chr2 233928137 233928467 BHLHE40 UCSC Txn Factor no Conserved 108435781
chr2 233928185 233928350 USF1 UCSC Txn Factor no Conserved 108435782
chr2 233927992 233927998 NFE2 TRANSFAC yes 22231757
chr2 233927992 233927998 NFE2 TRANSFAC yes 81802890
chr2 233927993 233928007 PLAG1 JASPAR yes 22231758
chr2 233927993 233928007 PLAG1 JASPAR yes 81802891
chr2 233928015 233928025 ID4 JASPAR yes 22231759
chr2 233928015 233928025 TCF4 JASPAR yes 22231760
chr2 233928015 233928025 ID4 JASPAR yes 81802892
chr2 233928015 233928025 TCF4 JASPAR yes 81802893
chr2 233928024 233928039 JUND JASPAR yes 22231761
chr2 233928024 233928039 JUND JASPAR yes 81802894
chr2 233928025 233928038 JUN JASPAR yes 22231762
chr2 233928025 233928038 JUN JASPAR yes 81802895
chr2 233928026 233928034 CREB1 JASPAR yes 22231763
chr2 233928026 233928034 CREB1 JASPAR yes 81802896
chr2 233928054 233928065 E2F6 JASPAR yes 22231764
chr2 233928054 233928065 E2F6 JASPAR yes 81802897
chr2 233928059 233928073 PLAG1 JASPAR yes 22231765
chr2 233928059 233928073 PLAG1 JASPAR yes 81802898
chr2 233928065 233928084 CTCF JASPAR yes 22231766
chr2 233928065 233928084 CTCF JASPAR yes 81802899
chr2 233928066 233928080 ZIC1 JASPAR yes 22231767
chr2 233928066 233928080 ZIC1 JASPAR yes 81802900
chr2 233928066 233928081 ZIC3 JASPAR yes 22231768
chr2 233928066 233928081 ZIC3 JASPAR yes 81802901
chr2 233928076 233928081 SP1 TRANSFAC yes 22231769
chr2 233928076 233928081 SP1 TRANSFAC yes 81802902
chr2 233928076 233928090 PLAG1 JASPAR yes 22231770
chr2 233928076 233928090 PLAG1 JASPAR yes 81802903
chr2 233928079 233928083 LFA1 TRANSFAC yes 22231771
chr2 233928079 233928083 LFA1 TRANSFAC yes 81802904
chr2 233928104 233928114 FIGLA JASPAR yes 22231772
chr2 233928104 233928114 FIGLA JASPAR yes 81802905
chr2 233928106 233928111 USF2 TRANSFAC yes 22231773
chr2 233928106 233928111 USF2 TRANSFAC yes 81802906
chr2 233928119 233928123 LFA1 TRANSFAC yes 22231774
chr2 233928119 233928123 LFA1 TRANSFAC yes 81802907
chr2 233928149 233928169 ESR1 JASPAR yes 22231775
chr2 233928149 233928169 ESR1 JASPAR yes 81802908
chr2 233928157 233928168 EBF1 JASPAR yes 22231776
chr2 233928157 233928168 EBF1 JASPAR yes 81802909
chr2 233928164 233928170 MAZ TRANSFAC yes 22231777
chr2 233928164 233928170 MAZ TRANSFAC yes 81802910
chr2 233928168 233928173 SP1 TRANSFAC yes 22231778
chr2 233928168 233928173 SP1 TRANSFAC yes 81802911
chr2 233928168 233928183 HNF4A JASPAR yes 22231779
chr2 233928168 233928183 HNF4A JASPAR yes 81802912
chr2 233928169 233928184 HNF4G JASPAR yes 22231780
chr2 233928169 233928184 HNF4G JASPAR yes 81802913
chr2 233928173 233928179 SOX10 JASPAR yes 22231781
chr2 233928173 233928179 SOX10 JASPAR yes 81802914
chr2 233928203 233928215 POU2F1 JASPAR yes 22231782
chr2 233928203 233928215 POU2F1 JASPAR yes 81802915
chr2 233928203 233928217 POU1F1 JASPAR yes 22231783
chr2 233928203 233928217 POU1F1 JASPAR yes 81802916
chr2 233928204 233928216 POU3F1 JASPAR yes 22231784
chr2 233928204 233928216 POU3F2 JASPAR yes 22231785
chr2 233928204 233928216 POU3F1 JASPAR yes 81802917
chr2 233928204 233928216 POU3F2 JASPAR yes 81802918
chr2 233928204 233928217 POU2F2 JASPAR yes 22231786
chr2 233928204 233928217 POU2F2 JASPAR yes 81802919
chr2 233928205 233928213 FOXL1 JASPAR yes 22231787
chr2 233928205 233928213 FOXL1 JASPAR yes 81802920
chr2 233928205 233928214 POU3F4 JASPAR yes 22231788
chr2 233928205 233928214 POU5F1B JASPAR yes 22231789
chr2 233928205 233928214 POU3F4 JASPAR yes 81802921
chr2 233928205 233928214 POU5F1B JASPAR yes 81802922
chr2 233928231 233928245 TCF7L2 JASPAR yes 22231790
chr2 233928231 233928245 TCF7L2 JASPAR yes 81802923
chr2 233928231 233928246 LEF1 JASPAR yes 22231791
chr2 233928231 233928246 LEF1 JASPAR yes 81802924
chr2 233928265 233928276 USF1 JASPAR yes 22231792
chr2 233928265 233928276 USF2 JASPAR yes 22231793
chr2 233928265 233928276 USF1 JASPAR yes 81802925
chr2 233928265 233928276 USF2 JASPAR yes 81802926
chr2 233928266 233928276 MAX JASPAR yes 22231794
chr2 233928266 233928276 MAX JASPAR yes 81802927
chr2 233928296 233928316 RREB1 JASPAR yes 22231795
chr2 233928296 233928316 RREB1 JASPAR yes 81802928
chr2 233928297 233928313 ZNF143 JASPAR yes 22231796
chr2 233928297 233928313 ZNF143 JASPAR yes 81802929
chr2 233928306 233928322 SOX4 JASPAR yes 22231797
chr2 233928306 233928322 SOX4 JASPAR yes 81802930
chr2 233928312 233928329 BCL6B JASPAR yes 22231798
chr2 233928312 233928329 BCL6B JASPAR yes 81802931
chr2 233928313 233928317 YY1 TRANSFAC yes 22231799
chr2 233928313 233928317 YY1 TRANSFAC yes 81802932
chr2 233928314 233928322 FEV JASPAR yes 22231800
chr2 233928314 233928322 FEV JASPAR yes 81802933
chr2 233928328 233928332 ESR1 TRANSFAC yes 22231801
chr2 233928328 233928332 ESR1 TRANSFAC yes 81802934
SNP sites on vista35209[chr2:233927963-233928349]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 233928094 rs138302380 C T
POLR2A POU2F2
6444683
chr2 233928224 rs191123580 C T
BHLHE40 POLR2A POU2F2 RFX5 USF1
6444684
chr2 233928339 rs188432551 G A
BHLHE40 POLR2A POU2F2 RFX5 USF1
6444685
Genes possibly regulated by vista35209[chr2:233927963-233928349]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 233743396 233877982 - NGEF ENSG00000066248.10 233877982 0.88 1.0 3255 50019
chr2 233877324 233880595 + AC106876.2 ENSG00000222001.2 233877324 0.96 1.0 3256 49361
chr2 233897382 233899767 + NEU2 ENSG00000115488.3 233897382 1.0 1.0 3257 69419
chr2 233924677 234116549 + INPP5D ENSG00000168918.9 233924677 0.84 0.94 3258 96714
Expression level of Genes
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miRNAs possibly regulated by vista35209[chr2:233927963-233928349]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results