EnhancerDB
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  3. vista35213[chr2:233949832-233950220]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35213[chr2:233949832-233950220]
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Tissue distribution of vista35213
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Transcription factor that possibly regulate vista35213[chr2:233949832-233950220]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 233949824 233949837 SMAD2 JASPAR yes 22231938
chr2 233949824 233949837 SMAD2 JASPAR yes 81805893
chr2 233949838 233949859 LUN1 TRANSFAC yes 22231939
chr2 233949838 233949859 LUN1 TRANSFAC yes 81805894
chr2 233949863 233949872 SNAI2 JASPAR yes 22231940
chr2 233949863 233949872 SNAI2 JASPAR yes 81805895
chr2 233949863 233949873 ID4 JASPAR yes 22231941
chr2 233949863 233949873 ID4 JASPAR yes 81805896
chr2 233949866 233949879 NFKB1 JASPAR yes 22231942
chr2 233949866 233949879 NFKB1 JASPAR yes 81805897
chr2 233949868 233949874 ZNF354C JASPAR yes 22231943
chr2 233949868 233949874 ZNF354C JASPAR yes 81805898
chr2 233949871 233949882 USF1 JASPAR yes 22231944
chr2 233949871 233949882 USF2 JASPAR yes 22231945
chr2 233949871 233949882 USF1 JASPAR yes 81805899
chr2 233949871 233949882 USF2 JASPAR yes 81805900
chr2 233949872 233949882 SREBF2 JASPAR yes 22231946
chr2 233949872 233949882 SREBF2 JASPAR yes 81805901
chr2 233949874 233949879 USF2 TRANSFAC yes 22231947
chr2 233949874 233949879 USF2 TRANSFAC yes 81805902
chr2 233949877 233949890 NR2F1 JASPAR yes 22231948
chr2 233949877 233949890 NR2F1 JASPAR yes 81805903
chr2 233949878 233949886 CREB1 JASPAR yes 22231949
chr2 233949878 233949886 CREB1 JASPAR yes 81805904
chr2 233949881 233949885 ESR1 TRANSFAC yes 22231950
chr2 233949881 233949885 ESR1 TRANSFAC yes 81805905
chr2 233949904 233949908 LFA1 TRANSFAC yes 22231951
chr2 233949904 233949908 LFA1 TRANSFAC yes 81805906
chr2 233949907 233949919 YY1 JASPAR yes 22231952
chr2 233949907 233949919 YY1 JASPAR yes 81805907
chr2 233949911 233949922 CEBPB JASPAR yes 22231953
chr2 233949911 233949922 CEBPB JASPAR yes 81805908
chr2 233949912 233949925 NFKB1 JASPAR yes 22231954
chr2 233949912 233949925 NFKB2 JASPAR yes 22231955
chr2 233949912 233949925 NFKB1 JASPAR yes 81805909
chr2 233949912 233949925 NFKB2 JASPAR yes 81805910
chr2 233949935 233949948 POU2F2 JASPAR yes 22231956
chr2 233949935 233949948 POU2F2 JASPAR yes 81805911
chr2 233949944 233949960 GLIS1 JASPAR yes 22231957
chr2 233949944 233949960 GLIS1 JASPAR yes 81805912
chr2 233949945 233949965 RREB1 JASPAR yes 22231958
chr2 233949945 233949965 RREB1 JASPAR yes 81805913
chr2 233949971 233949987 RFX2 JASPAR yes 22231959
chr2 233949971 233949987 RFX3 JASPAR yes 22231960
chr2 233949971 233949987 RFX4 JASPAR yes 22231961
chr2 233949971 233949987 RFX2 JASPAR yes 81805914
chr2 233949971 233949987 RFX3 JASPAR yes 81805915
chr2 233949971 233949987 RFX4 JASPAR yes 81805916
chr2 233949997 233950005 TBX15 JASPAR yes 22231962
chr2 233949997 233950005 TBX15 JASPAR yes 81805917
chr2 233949997 233950008 E2F6 JASPAR yes 22231963
chr2 233949997 233950008 E2F6 JASPAR yes 81805918
chr2 233949998 233950003 SP1 TRANSFAC yes 22231964
chr2 233949998 233950003 SP1 TRANSFAC yes 81805919
chr2 233950067 233950086 PAX5 JASPAR yes 22231965
chr2 233950067 233950086 PAX5 JASPAR yes 81805920
chr2 233950071 233950082 NFE2L2 JASPAR yes 22231966
chr2 233950071 233950082 NFE2L2 JASPAR yes 81805921
chr2 233950085 233950089 NFE TRANSFAC yes 22231967
chr2 233950085 233950089 NFE TRANSFAC yes 81805922
chr2 233950090 233950105 FOXP1 JASPAR yes 22231968
chr2 233950090 233950105 FOXP1 JASPAR yes 81805923
chr2 233950091 233950106 FOXP1 JASPAR yes 22231969
chr2 233950091 233950106 FOXP1 JASPAR yes 81805924
chr2 233950091 233950112 IRF1 JASPAR yes 22231970
chr2 233950091 233950112 IRF1 JASPAR yes 81805925
chr2 233950092 233950107 FOXP1 JASPAR yes 22231971
chr2 233950092 233950107 FOXP1 JASPAR yes 81805926
chr2 233950092 233950113 IRF1 JASPAR yes 22231972
chr2 233950092 233950113 IRF1 JASPAR yes 81805927
chr2 233950093 233950108 FOXP1 JASPAR yes 22231973
chr2 233950093 233950108 FOXP1 JASPAR yes 81805928
chr2 233950093 233950114 IRF1 JASPAR yes 22231974
chr2 233950093 233950114 IRF1 JASPAR yes 81805929
chr2 233950094 233950109 FOXP1 JASPAR yes 22231975
chr2 233950094 233950109 FOXP1 JASPAR yes 81805930
chr2 233950095 233950110 FOXP1 JASPAR yes 22231976
chr2 233950095 233950110 FOXP1 JASPAR yes 81805931
chr2 233950095 233950116 IRF1 JASPAR yes 22231977
chr2 233950095 233950116 IRF1 JASPAR yes 81805932
chr2 233950096 233950111 FOXP1 JASPAR yes 22231978
chr2 233950096 233950111 FOXP1 JASPAR yes 81805933
chr2 233950098 233950113 FOXP1 JASPAR yes 22231979
chr2 233950098 233950113 FOXP1 JASPAR yes 81805934
chr2 233950099 233950120 IRF1 JASPAR yes 22231980
chr2 233950099 233950120 IRF1 JASPAR yes 81805935
chr2 233950103 233950121 NR3C1 JASPAR yes 22231981
chr2 233950103 233950121 NR3C1 JASPAR yes 81805936
chr2 233950107 233950117 TEAD1 JASPAR yes 22231982
chr2 233950107 233950117 TEAD1 JASPAR yes 81805937
chr2 233950133 233950148 HNF4G JASPAR yes 22231983
chr2 233950133 233950148 HNF4G JASPAR yes 81805938
chr2 233950145 233950156 ESRRB JASPAR yes 22231984
chr2 233950145 233950156 ESRRB JASPAR yes 81805939
chr2 233950183 233950187 YY1 TRANSFAC yes 22231985
chr2 233950183 233950187 YY1 TRANSFAC yes 81805940
chr2 233950183 233950198 FOXP1 JASPAR yes 22231986
chr2 233950183 233950198 FOXP1 JASPAR yes 81805941
chr2 233950183 233950204 IRF1 JASPAR yes 22231987
chr2 233950183 233950204 IRF1 JASPAR yes 81805942
chr2 233950213 233950218 SP1 TRANSFAC yes 22231988
chr2 233950213 233950218 SP1 TRANSFAC yes 81805943
SNP sites on vista35213[chr2:233949832-233950220]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 233949850 rs571613500 C A
LUN1
6445047
chr2 233949953 rs13002150 G A,C
GLIS1 RREB1
6445048
chr2 233949973 rs114306516 G A
RFX2 RFX3 RFX4
6445049
chr2 233950001 rs56404114 T C
E2F6 SP1 TBX15
6445050
chr2 233950007 rs141788755 G A
E2F6
6445051
chr2 233950011 rs553539453 G A,C no 6445052
Genes possibly regulated by vista35213[chr2:233949832-233950220]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 233743396 233877982 - NGEF ENSG00000066248.10 233877982 0.88 1.0 3255 28150
chr2 233877324 233880595 + AC106876.2 ENSG00000222001.2 233877324 0.96 1.0 3256 27492
chr2 233897382 233899767 + NEU2 ENSG00000115488.3 233897382 1.0 1.0 3257 47550
chr2 233924677 234116549 + INPP5D ENSG00000168918.9 233924677 0.84 0.94 3258 74845
Expression level of Genes
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miRNAs possibly regulated by vista35213[chr2:233949832-233950220]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results