EnhancerDB
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  3. vista35238[chr2:234882862-234883245]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35238[chr2:234882862-234883245]
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Tissue distribution of vista35238
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Transcription factor that possibly regulate vista35238[chr2:234882862-234883245]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 234883089 234883666 EP300 UCSC Txn Factor no Conserved 108435817
chr2 234883090 234883690 TCF12 UCSC Txn Factor no Conserved 108435818
chr2 234883153 234883666 FOSL2 UCSC Txn Factor no Conserved 108435819
chr2 234883202 234883564 ESR1 UCSC Txn Factor no Conserved 108435820
chr2 234882862 234882868 TCF4 TRANSFAC yes 22233100
chr2 234882862 234882868 TCF4 TRANSFAC yes 81838494
chr2 234882862 234882877 FOXP1 JASPAR yes 22233101
chr2 234882862 234882877 FOXP1 JASPAR yes 81838495
chr2 234882863 234882884 IRF1 JASPAR yes 22233102
chr2 234882863 234882884 IRF1 JASPAR yes 81838496
chr2 234882869 234882889 RREB1 JASPAR yes 22233103
chr2 234882869 234882889 RREB1 JASPAR yes 81838497
chr2 234882869 234882890 IRF1 JASPAR yes 22233104
chr2 234882869 234882890 IRF1 JASPAR yes 81838498
chr2 234882874 234882894 RREB1 JASPAR yes 22233105
chr2 234882874 234882894 RREB1 JASPAR yes 81838499
chr2 234882878 234882884 TCF4 TRANSFAC yes 22233106
chr2 234882878 234882884 TCF4 TRANSFAC yes 81838500
chr2 234882879 234882891 FOXC2 JASPAR yes 22233107
chr2 234882879 234882891 FOXC2 JASPAR yes 81838501
chr2 234882881 234882896 FOXP1 JASPAR yes 22233108
chr2 234882881 234882896 FOXP1 JASPAR yes 81838502
chr2 234882901 234882906 GATA1 TRANSFAC yes 22233109
chr2 234882901 234882906 GATA1 TRANSFAC yes 81838503
chr2 234882903 234882922 PAX5 JASPAR yes 22233110
chr2 234882903 234882922 PAX5 JASPAR yes 81838504
chr2 234882933 234882943 SREBF1 JASPAR yes 22233111
chr2 234882933 234882943 SREBF2 JASPAR yes 22233112
chr2 234882933 234882943 SREBF1 JASPAR yes 81838505
chr2 234882933 234882943 SREBF2 JASPAR yes 81838506
chr2 234882938 234882946 NR4A2 JASPAR yes 22233113
chr2 234882938 234882946 NR4A2 JASPAR yes 81838507
chr2 234882944 234882958 TLX1 JASPAR yes 22233114
chr2 234882944 234882958 TLX1 JASPAR yes 81838508
chr2 234882944 234882962 ESR2 JASPAR yes 22233115
chr2 234882944 234882962 ESR2 JASPAR yes 81838509
chr2 234882945 234882962 ESR1 JASPAR yes 22233116
chr2 234882945 234882962 ESR1 JASPAR yes 81838510
chr2 234882948 234882969 ZNF263 JASPAR yes 22233117
chr2 234882948 234882969 ZNF263 JASPAR yes 81838511
chr2 234883004 234883009 GATA1 TRANSFAC yes 22233118
chr2 234883004 234883009 GATA1 TRANSFAC yes 81838512
chr2 234883018 234883038 TP63 JASPAR yes 22233119
chr2 234883018 234883038 TP63 JASPAR yes 81838513
chr2 234883023 234883044 REST JASPAR yes 22233120
chr2 234883023 234883044 REST JASPAR yes 81838514
chr2 234883024 234883043 REST JASPAR yes 22233121
chr2 234883024 234883043 REST JASPAR yes 81838515
chr2 234883029 234883039 SP1 JASPAR yes 22233122
chr2 234883029 234883039 SP1 JASPAR yes 81838516
chr2 234883032 234883041 HIC2 JASPAR yes 22233123
chr2 234883032 234883041 HIC2 JASPAR yes 81838517
chr2 234883046 234883061 MEF2A JASPAR yes 22233124
chr2 234883046 234883061 MEF2A JASPAR yes 81838518
chr2 234883047 234883062 MEF2C JASPAR yes 22233125
chr2 234883047 234883062 MEF2C JASPAR yes 81838519
chr2 234883048 234883060 MEF2A JASPAR yes 22233126
chr2 234883048 234883060 MEF2B JASPAR yes 22233127
chr2 234883048 234883060 MEF2D JASPAR yes 22233128
chr2 234883048 234883060 MEF2A JASPAR yes 81838520
chr2 234883048 234883060 MEF2B JASPAR yes 81838521
chr2 234883048 234883060 MEF2D JASPAR yes 81838522
chr2 234883050 234883054 YY1 TRANSFAC yes 22233129
chr2 234883050 234883054 YY1 TRANSFAC yes 81838523
chr2 234883065 234883078 NFKB1 JASPAR yes 22233130
chr2 234883065 234883078 NFKB2 JASPAR yes 22233131
chr2 234883065 234883078 NFKB1 JASPAR yes 81838524
chr2 234883065 234883078 NFKB2 JASPAR yes 81838525
chr2 234883068 234883079 CEBPB JASPAR yes 22233132
chr2 234883068 234883079 CEBPB JASPAR yes 81838526
chr2 234883071 234883083 YY1 JASPAR yes 22233133
chr2 234883071 234883083 YY1 JASPAR yes 81838527
chr2 234883100 234883113 NR2F1 JASPAR yes 22233134
chr2 234883100 234883113 NR2F1 JASPAR yes 81838528
chr2 234883102 234883113 ESRRA JASPAR yes 22233135
chr2 234883102 234883113 ESRRB JASPAR yes 22233136
chr2 234883102 234883113 ESRRA JASPAR yes 81838529
chr2 234883102 234883113 ESRRB JASPAR yes 81838530
chr2 234883103 234883111 NR4A2 JASPAR yes 22233137
chr2 234883103 234883111 NR4A2 JASPAR yes 81838531
chr2 234883104 234883114 RORA JASPAR yes 22233138
chr2 234883104 234883114 RORA JASPAR yes 81838532
chr2 234883104 234883121 RARA JASPAR yes 22233139
chr2 234883104 234883121 RXRA JASPAR yes 22233140
chr2 234883104 234883121 RARA JASPAR yes 81838533
chr2 234883104 234883121 RXRA JASPAR yes 81838534
chr2 234883114 234883120 ZNF354C JASPAR yes 22233141
chr2 234883114 234883120 ZNF354C JASPAR yes 81838535
chr2 234883119 234883133 PLAG1 JASPAR yes 22233142
chr2 234883119 234883133 PLAG1 JASPAR yes 81838536
chr2 234883143 234883151 RHOXF1 JASPAR yes 22233143
chr2 234883143 234883151 RHOXF1 JASPAR yes 81838537
chr2 234883150 234883160 TBX21 JASPAR yes 22233144
chr2 234883150 234883160 TBX21 JASPAR yes 81838538
chr2 234883150 234883161 TBX20 JASPAR yes 22233145
chr2 234883150 234883161 TBX2 JASPAR yes 22233146
chr2 234883150 234883161 TBX20 JASPAR yes 81838539
chr2 234883150 234883161 TBX2 JASPAR yes 81838540
chr2 234883150 234883163 EOMES JASPAR yes 22233147
chr2 234883150 234883163 EOMES JASPAR yes 81838541
chr2 234883151 234883159 MGA JASPAR yes 22233148
chr2 234883151 234883159 TBX15 JASPAR yes 22233149
chr2 234883151 234883159 TBX1 JASPAR yes 22233150
chr2 234883151 234883159 TBX4 JASPAR yes 22233151
chr2 234883151 234883159 TBX5 JASPAR yes 22233152
chr2 234883151 234883159 MGA JASPAR yes 81838542
chr2 234883151 234883159 TBX15 JASPAR yes 81838543
chr2 234883151 234883159 TBX1 JASPAR yes 81838544
chr2 234883151 234883159 TBX4 JASPAR yes 81838545
chr2 234883151 234883159 TBX5 JASPAR yes 81838546
chr2 234883151 234883161 TBR1 JASPAR yes 22233153
chr2 234883151 234883161 TBR1 JASPAR yes 81838547
chr2 234883151 234883164 SMAD2 JASPAR yes 22233154
chr2 234883151 234883164 SMAD2 JASPAR yes 81838548
chr2 234883198 234883213 HNF1A JASPAR yes 22233155
chr2 234883198 234883213 HNF1A JASPAR yes 81838549
chr2 234883199 234883212 HNF1B JASPAR yes 22233156
chr2 234883199 234883212 HNF1B JASPAR yes 81838550
chr2 234883206 234883217 ESRRB JASPAR yes 22233157
chr2 234883206 234883217 ESRRB JASPAR yes 81838551
chr2 234883208 234883211 MYB TRANSFAC yes 22233158
chr2 234883208 234883211 MYB TRANSFAC yes 81838552
chr2 234883218 234883222 LFA1 TRANSFAC yes 22233159
chr2 234883218 234883222 LFA1 TRANSFAC yes 81838553
chr2 234883228 234883245 BCL6B JASPAR yes 22233160
chr2 234883228 234883245 BCL6B JASPAR yes 81838554
chr2 234883240 234883258 SRF JASPAR yes 22233161
chr2 234883240 234883258 SRF JASPAR yes 81838555
SNP sites on vista35238[chr2:234882862-234883245]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 234882902 rs28902192 G A
GATA1
6448575
chr2 234882920 rs141901071 C T
PAX5
6448576
chr2 234882936 rs28901875 G C
SREBF1 SREBF2
6448577
chr2 234883167 rs2005791 C A
EP300 FOSL2 TCF12
6448578
chr2 234883193 rs193293581 G T
EP300 FOSL2 TCF12
6448579
Genes possibly regulated by vista35238[chr2:234882862-234883245]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 234826043 234928166 + TRPM8 ENSG00000144481.12 234826043 1.0 1.0 3274 43181
chr2 234959323 234985778 + SPP2 ENSG00000072080.6 234959323 1.0 1.0 3275 23922
Expression level of Genes
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miRNAs possibly regulated by vista35238[chr2:234882862-234883245]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results