EnhancerDB
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  3. vista35254[chr2:235238832-235239060]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35254[chr2:235238832-235239060]
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Tissue distribution of vista35254
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Transcription factor that possibly regulate vista35254[chr2:235238832-235239060]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235238822 235238836 PAX6 JASPAR yes 22233967
chr2 235238822 235238836 PAX6 JASPAR yes 81867116
chr2 235238825 235238833 ISL2 JASPAR yes 22233968
chr2 235238825 235238833 ISL2 JASPAR yes 81867117
chr2 235238825 235238834 NKX3-2 JASPAR yes 22233969
chr2 235238825 235238834 NKX3-2 JASPAR yes 81867118
chr2 235238826 235238836 TBX21 JASPAR yes 22233970
chr2 235238826 235238836 TBX21 JASPAR yes 81867119
chr2 235238826 235238837 TBX20 JASPAR yes 22233971
chr2 235238826 235238837 TBX2 JASPAR yes 22233972
chr2 235238826 235238837 TBX20 JASPAR yes 81867120
chr2 235238826 235238837 TBX2 JASPAR yes 81867121
chr2 235238826 235238839 EOMES JASPAR yes 22233973
chr2 235238826 235238839 EOMES JASPAR yes 81867122
chr2 235238827 235238835 MGA JASPAR yes 22233974
chr2 235238827 235238835 TBX15 JASPAR yes 22233975
chr2 235238827 235238835 TBX1 JASPAR yes 22233976
chr2 235238827 235238835 TBX4 JASPAR yes 22233977
chr2 235238827 235238835 TBX5 JASPAR yes 22233978
chr2 235238827 235238835 MGA JASPAR yes 81867123
chr2 235238827 235238835 TBX15 JASPAR yes 81867124
chr2 235238827 235238835 TBX1 JASPAR yes 81867125
chr2 235238827 235238835 TBX4 JASPAR yes 81867126
chr2 235238827 235238835 TBX5 JASPAR yes 81867127
chr2 235238827 235238837 TBR1 JASPAR yes 22233979
chr2 235238827 235238837 TBR1 JASPAR yes 81867128
chr2 235238838 235238845 NKX3-1 JASPAR yes 22233980
chr2 235238838 235238845 NKX3-1 JASPAR yes 81867129
chr2 235238840 235238851 FOS JASPAR yes 22233981
chr2 235238840 235238851 FOS JASPAR yes 81867130
chr2 235238840 235238858 MAFF JASPAR yes 22233982
chr2 235238840 235238858 MAFF JASPAR yes 81867131
chr2 235238841 235238852 FOSL2 JASPAR yes 22233983
chr2 235238841 235238852 JUNB JASPAR yes 22233984
chr2 235238841 235238852 FOSL2 JASPAR yes 81867132
chr2 235238841 235238852 JUNB JASPAR yes 81867133
chr2 235238841 235238855 JUN JASPAR yes 22233985
chr2 235238841 235238855 JUN JASPAR yes 81867134
chr2 235238841 235238856 MAFK JASPAR yes 22233986
chr2 235238841 235238856 MAFK JASPAR yes 81867135
chr2 235238842 235238853 BATF JASPAR yes 22233987
chr2 235238842 235238853 BATF JASPAR yes 81867136
chr2 235238845 235238858 EOMES JASPAR yes 22233988
chr2 235238845 235238858 EOMES JASPAR yes 81867137
chr2 235238847 235238858 TBX20 JASPAR yes 22233989
chr2 235238847 235238858 TBX20 JASPAR yes 81867138
chr2 235238848 235238858 TBX21 JASPAR yes 22233990
chr2 235238848 235238858 TBX21 JASPAR yes 81867139
chr2 235238848 235238860 HNF1B JASPAR yes 22233991
chr2 235238848 235238860 HNF1B JASPAR yes 81867140
chr2 235238849 235238865 T JASPAR yes 22233992
chr2 235238849 235238865 T JASPAR yes 81867141
chr2 235238854 235238868 PAX6 JASPAR yes 22233993
chr2 235238854 235238868 PAX6 JASPAR yes 81867142
chr2 235238864 235238885 IRF1 JASPAR yes 22233994
chr2 235238864 235238885 IRF1 JASPAR yes 81867143
chr2 235238865 235238886 IRF1 JASPAR yes 22233995
chr2 235238865 235238886 IRF1 JASPAR yes 81867144
chr2 235238869 235238884 FOXP1 JASPAR yes 22233996
chr2 235238869 235238884 FOXP1 JASPAR yes 81867145
chr2 235238870 235238885 FOXP1 JASPAR yes 22233997
chr2 235238870 235238885 FOXP1 JASPAR yes 81867146
chr2 235238871 235238886 FOXP1 JASPAR yes 22233998
chr2 235238871 235238886 FOXP1 JASPAR yes 81867147
chr2 235238872 235238887 FOXP1 JASPAR yes 22233999
chr2 235238872 235238887 FOXP1 JASPAR yes 81867148
chr2 235238873 235238888 FOXP1 JASPAR yes 22234000
chr2 235238873 235238888 FOXP1 JASPAR yes 81867149
chr2 235238874 235238889 FOXP1 JASPAR yes 22234001
chr2 235238874 235238889 FOXP1 JASPAR yes 81867150
chr2 235238894 235238913 PAX5 JASPAR yes 22234002
chr2 235238894 235238913 PAX5 JASPAR yes 81867151
chr2 235238899 235238918 RFX2 JASPAR yes 22234003
chr2 235238899 235238918 RFX2 JASPAR yes 81867152
chr2 235238916 235238935 REST JASPAR yes 22234004
chr2 235238916 235238935 REST JASPAR yes 81867153
chr2 235238931 235238939 FOXO3 JASPAR yes 22234005
chr2 235238931 235238939 FOXO3 JASPAR yes 81867154
chr2 235238932 235238941 SRY JASPAR yes 22234006
chr2 235238932 235238941 SRY JASPAR yes 81867155
chr2 235238939 235238950 FOXC1 JASPAR yes 22234007
chr2 235238939 235238950 FOXC1 JASPAR yes 81867156
chr2 235238940 235238944 YY1 TRANSFAC yes 22234008
chr2 235238940 235238944 YY1 TRANSFAC yes 81867157
chr2 235238941 235238956 MEF2C JASPAR yes 22234009
chr2 235238941 235238956 MEF2C JASPAR yes 81867158
chr2 235238942 235238957 LEF1 JASPAR yes 22234010
chr2 235238942 235238957 LEF1 JASPAR yes 81867159
chr2 235238943 235238957 GATA2 JASPAR yes 22234011
chr2 235238943 235238957 GATA2 JASPAR yes 81867160
chr2 235238943 235238958 FOXP1 JASPAR yes 22234012
chr2 235238943 235238958 FOXP1 JASPAR yes 81867161
chr2 235238947 235238955 GATA3 JASPAR yes 22234013
chr2 235238947 235238955 GATA3 JASPAR yes 81867162
chr2 235238970 235238982 IRF1 JASPAR yes 22234014
chr2 235238970 235238982 IRF1 JASPAR yes 81867163
chr2 235238970 235238984 IRF7 JASPAR yes 22234015
chr2 235238970 235238984 IRF7 JASPAR yes 81867164
chr2 235238975 235238979 YY1 TRANSFAC yes 22234016
chr2 235238975 235238979 YY1 TRANSFAC yes 81867165
chr2 235238977 235238983 TCF4 TRANSFAC yes 22234017
chr2 235238977 235238983 TCF4 TRANSFAC yes 81867166
chr2 235238992 235239002 MAX JASPAR yes 22234018
chr2 235238992 235239002 MAX JASPAR yes 81867167
chr2 235239001 235239021 RREB1 JASPAR yes 22234019
chr2 235239001 235239021 RREB1 JASPAR yes 81867168
chr2 235239024 235239030 TCF4 TRANSFAC yes 22234020
chr2 235239024 235239030 TCF4 TRANSFAC yes 81867169
chr2 235239030 235239034 YY1 TRANSFAC yes 22234021
chr2 235239030 235239034 YY1 TRANSFAC yes 81867170
chr2 235239035 235239039 YY1 TRANSFAC yes 22234022
chr2 235239035 235239039 YY1 TRANSFAC yes 81867171
SNP sites on vista35254[chr2:235238832-235239060]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235238943 rs189066187 T A,C
FOXC1 FOXP1 GATA2 LEF1 MEF2C YY1
6451613
chr2 235238944 rs190621678 T G
FOXC1 FOXP1 GATA2 LEF1 MEF2C YY1
6451614
chr2 235239001 rs139465338 A ATG
MAX RREB1
6451615
chr2 235239001 rs762223658 A ATG
MAX RREB1
6451616
chr2 235239010 rs71423634 T C
RREB1
6451617
Genes possibly regulated by vista35254[chr2:235238832-235239060]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista35254[chr2:235238832-235239060]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results