EnhancerDB
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  3. vista35276[chr2:235392262-235392984]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35276[chr2:235392262-235392984]
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Tissue distribution of vista35276
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Transcription factor that possibly regulate vista35276[chr2:235392262-235392984]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235392503 235392949 CTCF UCSC Txn Factor no Conserved 108435841
chr2 235392252 235392273 ZNF263 JASPAR yes 22235223
chr2 235392252 235392273 ZNF263 JASPAR yes 81883524
chr2 235392253 235392267 PLAG1 JASPAR yes 22235224
chr2 235392253 235392267 PLAG1 JASPAR yes 81883525
chr2 235392263 235392268 ETS2 TRANSFAC yes 22235225
chr2 235392263 235392268 ETS2 TRANSFAC yes 81883526
chr2 235392279 235392289 FIGLA JASPAR yes 22235226
chr2 235392279 235392289 ID4 JASPAR yes 22235227
chr2 235392279 235392289 TCF3 JASPAR yes 22235228
chr2 235392279 235392289 TCF4 JASPAR yes 22235229
chr2 235392279 235392289 FIGLA JASPAR yes 81883527
chr2 235392279 235392289 ID4 JASPAR yes 81883528
chr2 235392279 235392289 TCF3 JASPAR yes 81883529
chr2 235392279 235392289 TCF4 JASPAR yes 81883530
chr2 235392299 235392311 PKNOX1 JASPAR yes 22235230
chr2 235392299 235392311 PKNOX2 JASPAR yes 22235231
chr2 235392299 235392311 PKNOX1 JASPAR yes 81883531
chr2 235392299 235392311 PKNOX2 JASPAR yes 81883532
chr2 235392300 235392310 MSC JASPAR yes 22235232
chr2 235392300 235392310 MYF6 JASPAR yes 22235233
chr2 235392300 235392310 MSC JASPAR yes 81883533
chr2 235392300 235392310 MYF6 JASPAR yes 81883534
chr2 235392301 235392322 REST JASPAR yes 22235234
chr2 235392301 235392322 REST JASPAR yes 81883535
chr2 235392305 235392309 NFE TRANSFAC yes 22235235
chr2 235392305 235392309 NFE TRANSFAC yes 81883536
chr2 235392308 235392314 MZF1 JASPAR yes 22235236
chr2 235392308 235392314 MZF1 JASPAR yes 81883537
chr2 235392312 235392328 ZNF143 JASPAR yes 22235237
chr2 235392312 235392328 ZNF143 JASPAR yes 81883538
chr2 235392326 235392337 NFKB1 JASPAR yes 22235238
chr2 235392326 235392337 NFKB1 JASPAR yes 81883539
chr2 235392328 235392342 SPI1 JASPAR yes 22235239
chr2 235392328 235392342 SPIC JASPAR yes 22235240
chr2 235392328 235392342 SPI1 JASPAR yes 81883540
chr2 235392328 235392342 SPIC JASPAR yes 81883541
chr2 235392331 235392341 MZF1 JASPAR yes 22235241
chr2 235392331 235392341 MZF1 JASPAR yes 81883542
chr2 235392332 235392338 MZF1 JASPAR yes 22235242
chr2 235392332 235392338 MZF1 JASPAR yes 81883543
chr2 235392337 235392352 RUNX2 JASPAR yes 22235243
chr2 235392337 235392352 RUNX2 JASPAR yes 81883544
chr2 235392340 235392351 RUNX1 JASPAR yes 22235244
chr2 235392340 235392351 RUNX1 JASPAR yes 81883545
chr2 235392341 235392351 RUNX3 JASPAR yes 22235245
chr2 235392341 235392351 RUNX3 JASPAR yes 81883546
chr2 235392342 235392351 RUNX2 JASPAR yes 22235246
chr2 235392342 235392351 RUNX2 JASPAR yes 81883547
chr2 235392364 235392374 POU6F2 JASPAR yes 22235247
chr2 235392364 235392374 POU6F2 JASPAR yes 81883548
chr2 235392365 235392375 ALX3 JASPAR yes 22235248
chr2 235392365 235392375 EMX1 JASPAR yes 22235249
chr2 235392365 235392375 EMX2 JASPAR yes 22235250
chr2 235392365 235392375 ESX1 JASPAR yes 22235251
chr2 235392365 235392375 GBX2 JASPAR yes 22235252
chr2 235392365 235392375 GSX1 JASPAR yes 22235253
chr2 235392365 235392375 GSX2 JASPAR yes 22235254
chr2 235392365 235392375 HESX1 JASPAR yes 22235255
chr2 235392365 235392375 HOXB2 JASPAR yes 22235256
chr2 235392365 235392375 HOXB3 JASPAR yes 22235257
chr2 235392365 235392375 LBX2 JASPAR yes 22235258
chr2 235392365 235392375 LHX2 JASPAR yes 22235259
chr2 235392365 235392375 LHX6 JASPAR yes 22235260
chr2 235392365 235392375 MEOX1 JASPAR yes 22235261
chr2 235392365 235392375 MEOX2 JASPAR yes 22235262
chr2 235392365 235392375 MIXL1 JASPAR yes 22235263
chr2 235392365 235392375 MNX1 JASPAR yes 22235264
chr2 235392365 235392375 NOTO JASPAR yes 22235265
chr2 235392365 235392375 RAX JASPAR yes 22235266
chr2 235392365 235392375 ALX3 JASPAR yes 81883549
chr2 235392365 235392375 EMX1 JASPAR yes 81883550
chr2 235392365 235392375 EMX2 JASPAR yes 81883551
chr2 235392365 235392375 ESX1 JASPAR yes 81883552
chr2 235392365 235392375 GBX2 JASPAR yes 81883553
chr2 235392365 235392375 GSX1 JASPAR yes 81883554
chr2 235392365 235392375 GSX2 JASPAR yes 81883555
chr2 235392365 235392375 HESX1 JASPAR yes 81883556
chr2 235392365 235392375 HOXB2 JASPAR yes 81883557
chr2 235392365 235392375 HOXB3 JASPAR yes 81883558
chr2 235392365 235392375 LBX2 JASPAR yes 81883559
chr2 235392365 235392375 LHX2 JASPAR yes 81883560
chr2 235392365 235392375 LHX6 JASPAR yes 81883561
chr2 235392365 235392375 MEOX1 JASPAR yes 81883562
chr2 235392365 235392375 MEOX2 JASPAR yes 81883563
chr2 235392365 235392375 MIXL1 JASPAR yes 81883564
chr2 235392365 235392375 MNX1 JASPAR yes 81883565
chr2 235392365 235392375 NOTO JASPAR yes 81883566
chr2 235392365 235392375 RAX JASPAR yes 81883567
chr2 235392365 235392376 HOXA10 JASPAR yes 22235267
chr2 235392365 235392376 HOXA10 JASPAR yes 81883568
chr2 235392366 235392374 BSX JASPAR yes 22235268
chr2 235392366 235392374 DLX6 JASPAR yes 22235269
chr2 235392366 235392374 EN1 JASPAR yes 22235270
chr2 235392366 235392374 ISX JASPAR yes 22235271
chr2 235392366 235392374 LBX1 JASPAR yes 22235272
chr2 235392366 235392374 LHX9 JASPAR yes 22235273
chr2 235392366 235392374 LMX1A JASPAR yes 22235274
chr2 235392366 235392374 LMX1B JASPAR yes 22235275
chr2 235392366 235392374 NKX6-1 JASPAR yes 22235276
chr2 235392366 235392374 NKX6-2 JASPAR yes 22235277
chr2 235392366 235392374 PAX4 JASPAR yes 22235278
chr2 235392366 235392374 PDX1 JASPAR yes 22235279
chr2 235392366 235392374 PRRX1 JASPAR yes 22235280
chr2 235392366 235392374 RAX2 JASPAR yes 22235281
chr2 235392366 235392374 SHOX JASPAR yes 22235282
chr2 235392366 235392374 UNCX JASPAR yes 22235283
chr2 235392366 235392374 VAX1 JASPAR yes 22235284
chr2 235392366 235392374 VAX2 JASPAR yes 22235285
chr2 235392366 235392374 VSX1 JASPAR yes 22235286
chr2 235392366 235392374 VSX2 JASPAR yes 22235287
chr2 235392366 235392374 BSX JASPAR yes 81883569
chr2 235392366 235392374 DLX6 JASPAR yes 81883570
chr2 235392366 235392374 EN1 JASPAR yes 81883571
chr2 235392366 235392374 ISX JASPAR yes 81883572
chr2 235392366 235392374 LBX1 JASPAR yes 81883573
chr2 235392366 235392374 LHX9 JASPAR yes 81883574
chr2 235392366 235392374 LMX1A JASPAR yes 81883575
chr2 235392366 235392374 LMX1B JASPAR yes 81883576
chr2 235392366 235392374 NKX6-1 JASPAR yes 81883577
chr2 235392366 235392374 NKX6-2 JASPAR yes 81883578
chr2 235392366 235392374 PAX4 JASPAR yes 81883579
chr2 235392366 235392374 PDX1 JASPAR yes 81883580
chr2 235392366 235392374 PRRX1 JASPAR yes 81883581
chr2 235392366 235392374 RAX2 JASPAR yes 81883582
chr2 235392366 235392374 SHOX JASPAR yes 81883583
chr2 235392366 235392374 UNCX JASPAR yes 81883584
chr2 235392366 235392374 VAX1 JASPAR yes 81883585
chr2 235392366 235392374 VAX2 JASPAR yes 81883586
chr2 235392366 235392374 VSX1 JASPAR yes 81883587
chr2 235392366 235392374 VSX2 JASPAR yes 81883588
chr2 235392366 235392376 HOXB13 JASPAR yes 22235288
chr2 235392366 235392376 HOXD13 JASPAR yes 22235289
chr2 235392366 235392376 HOXB13 JASPAR yes 81883589
chr2 235392366 235392376 HOXD13 JASPAR yes 81883590
chr2 235392391 235392403 PROX1 JASPAR yes 22235290
chr2 235392391 235392403 PROX1 JASPAR yes 81883591
chr2 235392400 235392417 BCL6B JASPAR yes 22235291
chr2 235392400 235392417 BCL6B JASPAR yes 81883592
chr2 235392401 235392416 STAT1 JASPAR yes 22235292
chr2 235392401 235392416 STAT1 JASPAR yes 81883593
chr2 235392419 235392436 PAX1 JASPAR yes 22235293
chr2 235392419 235392436 PAX9 JASPAR yes 22235294
chr2 235392419 235392436 PAX1 JASPAR yes 81883594
chr2 235392419 235392436 PAX9 JASPAR yes 81883595
chr2 235392452 235392457 MYB TRANSFAC yes 22235295
chr2 235392452 235392457 MYB TRANSFAC yes 81883596
chr2 235392462 235392465 MYB TRANSFAC yes 22235296
chr2 235392462 235392465 MYB TRANSFAC yes 81883597
chr2 235392481 235392499 SRF JASPAR yes 22235297
chr2 235392481 235392499 SRF JASPAR yes 81883598
chr2 235392483 235392499 SRF JASPAR yes 22235298
chr2 235392483 235392499 SRF JASPAR yes 81883599
chr2 235392483 235392501 SRF JASPAR yes 22235299
chr2 235392483 235392501 SRF JASPAR yes 81883600
chr2 235392484 235392496 SRF JASPAR yes 22235300
chr2 235392484 235392496 SRF JASPAR yes 81883601
chr2 235392486 235392498 SRF JASPAR yes 22235301
chr2 235392486 235392498 SRF JASPAR yes 81883602
chr2 235392489 235392493 YY1 TRANSFAC yes 22235302
chr2 235392489 235392493 YY1 TRANSFAC yes 81883603
chr2 235392504 235392508 YY1 TRANSFAC yes 22235303
chr2 235392504 235392508 YY1 TRANSFAC yes 81883604
chr2 235392527 235392540 NR2F1 JASPAR yes 22235304
chr2 235392527 235392540 NR2F1 JASPAR yes 81883605
chr2 235392531 235392535 ESR1 TRANSFAC yes 22235305
chr2 235392531 235392535 ESR1 TRANSFAC yes 81883606
chr2 235392563 235392576 JUN JASPAR yes 22235306
chr2 235392563 235392576 JUN JASPAR yes 81883607
chr2 235392567 235392587 TBX19 JASPAR yes 22235307
chr2 235392567 235392587 TBX19 JASPAR yes 81883608
chr2 235392569 235392585 T JASPAR yes 22235308
chr2 235392569 235392585 T JASPAR yes 81883609
chr2 235392574 235392589 PRDM1 JASPAR yes 22235309
chr2 235392574 235392589 PRDM1 JASPAR yes 81883610
chr2 235392580 235392595 HNF4G JASPAR yes 22235310
chr2 235392580 235392595 HNF4G JASPAR yes 81883611
chr2 235392586 235392604 ESR1 JASPAR yes 22235311
chr2 235392586 235392604 ESR1 JASPAR yes 81883612
chr2 235392617 235392627 TFE3 JASPAR yes 22235312
chr2 235392617 235392627 TFEB JASPAR yes 22235313
chr2 235392617 235392627 TFEC JASPAR yes 22235314
chr2 235392617 235392627 TFE3 JASPAR yes 81883613
chr2 235392617 235392627 TFEB JASPAR yes 81883614
chr2 235392617 235392627 TFEC JASPAR yes 81883615
chr2 235392629 235392649 PPARG JASPAR yes 22235315
chr2 235392629 235392649 PPARG JASPAR yes 81883616
chr2 235392653 235392665 IRF1 JASPAR yes 22235316
chr2 235392653 235392665 IRF1 JASPAR yes 81883617
chr2 235392717 235392734 RARA JASPAR yes 22235317
chr2 235392717 235392734 RARA JASPAR yes 81883618
chr2 235392726 235392731 ETS2 TRANSFAC yes 22235318
chr2 235392726 235392731 ETS2 TRANSFAC yes 81883619
chr2 235392742 235392750 TBX15 JASPAR yes 22235319
chr2 235392742 235392750 TBX1 JASPAR yes 22235320
chr2 235392742 235392750 TBX4 JASPAR yes 22235321
chr2 235392742 235392750 TBX5 JASPAR yes 22235322
chr2 235392742 235392750 TBX15 JASPAR yes 81883620
chr2 235392742 235392750 TBX1 JASPAR yes 81883621
chr2 235392742 235392750 TBX4 JASPAR yes 81883622
chr2 235392742 235392750 TBX5 JASPAR yes 81883623
chr2 235392768 235392788 TBX19 JASPAR yes 22235323
chr2 235392768 235392788 TBX19 JASPAR yes 81883624
chr2 235392770 235392786 T JASPAR yes 22235324
chr2 235392770 235392786 T JASPAR yes 81883625
chr2 235392791 235392810 RFX2 JASPAR yes 22235325
chr2 235392791 235392810 RFX2 JASPAR yes 81883626
chr2 235392796 235392805 NFIX JASPAR yes 22235326
chr2 235392796 235392805 NFIX JASPAR yes 81883627
chr2 235392798 235392804 NFIC JASPAR yes 22235327
chr2 235392798 235392804 NFIC JASPAR yes 81883628
chr2 235392808 235392828 RREB1 JASPAR yes 22235328
chr2 235392808 235392828 RREB1 JASPAR yes 81883629
chr2 235392810 235392825 RUNX2 JASPAR yes 22235329
chr2 235392810 235392825 RUNX2 JASPAR yes 81883630
chr2 235392814 235392824 RUNX3 JASPAR yes 22235330
chr2 235392814 235392824 RUNX3 JASPAR yes 81883631
chr2 235392819 235392838 RFX2 JASPAR yes 22235331
chr2 235392819 235392838 RFX2 JASPAR yes 81883632
chr2 235392821 235392836 RFX5 JASPAR yes 22235332
chr2 235392821 235392836 RFX5 JASPAR yes 81883633
chr2 235392823 235392839 RFX2 JASPAR yes 22235333
chr2 235392823 235392839 RFX3 JASPAR yes 22235334
chr2 235392823 235392839 RFX4 JASPAR yes 22235335
chr2 235392823 235392839 RFX5 JASPAR yes 22235336
chr2 235392823 235392839 RFX2 JASPAR yes 81883634
chr2 235392823 235392839 RFX3 JASPAR yes 81883635
chr2 235392823 235392839 RFX4 JASPAR yes 81883636
chr2 235392823 235392839 RFX5 JASPAR yes 81883637
chr2 235392824 235392843 RFX2 JASPAR yes 22235337
chr2 235392824 235392843 RFX2 JASPAR yes 81883638
chr2 235392845 235392865 RREB1 JASPAR yes 22235338
chr2 235392845 235392865 RREB1 JASPAR yes 81883639
chr2 235392848 235392851 MYB TRANSFAC yes 22235339
chr2 235392848 235392851 MYB TRANSFAC yes 81883640
chr2 235392853 235392873 RREB1 JASPAR yes 22235340
chr2 235392853 235392873 RREB1 JASPAR yes 81883641
chr2 235392875 235392887 GRHL1 JASPAR yes 22235341
chr2 235392875 235392887 GRHL1 JASPAR yes 81883642
chr2 235392882 235392892 NOTO JASPAR yes 22235342
chr2 235392882 235392892 NOTO JASPAR yes 81883643
chr2 235392907 235392913 NFIC JASPAR yes 22235343
chr2 235392907 235392913 NFIC JASPAR yes 81883644
chr2 235392907 235392920 TFAP2A JASPAR yes 22235344
chr2 235392907 235392920 TFAP2A JASPAR yes 81883645
chr2 235392915 235392919 LFA1 TRANSFAC yes 22235345
chr2 235392915 235392919 LFA1 TRANSFAC yes 81883646
chr2 235392918 235392922 YY1 TRANSFAC yes 22235346
chr2 235392918 235392922 YY1 TRANSFAC yes 81883647
chr2 235392919 235392931 FOXI1 JASPAR yes 22235347
chr2 235392919 235392931 FOXI1 JASPAR yes 81883648
chr2 235392922 235392926 YY1 TRANSFAC yes 22235348
chr2 235392922 235392926 YY1 TRANSFAC yes 81883649
chr2 235392931 235392950 REST JASPAR yes 22235349
chr2 235392931 235392950 REST JASPAR yes 81883650
chr2 235392934 235392938 NFE TRANSFAC yes 22235350
chr2 235392934 235392938 NFE TRANSFAC yes 81883651
chr2 235392945 235392961 GLIS1 JASPAR yes 22235351
chr2 235392945 235392961 GLIS1 JASPAR yes 81883652
chr2 235392946 235392960 GLIS2 JASPAR yes 22235352
chr2 235392946 235392960 GLIS2 JASPAR yes 81883653
chr2 235392973 235392979 YY1 JASPAR yes 22235353
chr2 235392973 235392979 YY1 JASPAR yes 81883654
chr2 235392980 235392992 GLI2 JASPAR yes 22235354
chr2 235392980 235392992 GLI2 JASPAR yes 81883655
SNP sites on vista35276[chr2:235392262-235392984]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235392294 rs148342471 G A no 6453529
chr2 235392398 rs60500159 G A,C
PROX1
6453530
chr2 235392439 rs76531666 C A no 6453531
chr2 235392573 rs559627095 C CA
CTCF JUN T TBX19
6453532
chr2 235392703 rs79495670 G A
CTCF
6453533
chr2 235392713 rs6735354 C T
CTCF
6453534
chr2 235392751 rs62184402 C T
CTCF
6453535
chr2 235392787 rs150122226 A G
CTCF TBX19
6453536
chr2 235392816 rs576271670 T G
CTCF RREB1 RUNX2 RUNX3
6453537
chr2 235392893 rs11900995 C T
CTCF
6453538
chr2 235392980 rs572026539 A G
GLI2
6453539
Genes possibly regulated by vista35276[chr2:235392262-235392984]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 235401685 235405697 - ARL4C ENSG00000188042.5 235405697 0.85 0.98 3276 87287
Expression level of Genes
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miRNAs possibly regulated by vista35276[chr2:235392262-235392984]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results