EnhancerDB
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  3. vista35278[chr2:235399360-235399773]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35278[chr2:235399360-235399773]
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Tissue distribution of vista35278
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Transcription factor that possibly regulate vista35278[chr2:235399360-235399773]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235399371 235399377 NFIC JASPAR yes 22235468
chr2 235399371 235399377 NFIC JASPAR yes 81884444
chr2 235399379 235399388 HIC2 JASPAR yes 22235469
chr2 235399379 235399388 HIC2 JASPAR yes 81884445
chr2 235399382 235399386 LFA1 TRANSFAC yes 22235470
chr2 235399382 235399386 LFA1 TRANSFAC yes 81884446
chr2 235399405 235399411 SOX10 JASPAR yes 22235471
chr2 235399405 235399411 SOX10 JASPAR yes 81884447
chr2 235399432 235399436 LFA1 TRANSFAC yes 22235472
chr2 235399432 235399436 LFA1 TRANSFAC yes 81884448
chr2 235399461 235399465 NFE TRANSFAC yes 22235473
chr2 235399461 235399465 NFE TRANSFAC yes 81884449
chr2 235399466 235399480 SPI1 JASPAR yes 22235474
chr2 235399466 235399480 SPI1 JASPAR yes 81884450
chr2 235399474 235399478 YY1 TRANSFAC yes 22235475
chr2 235399474 235399478 YY1 TRANSFAC yes 81884451
chr2 235399485 235399499 SPIC JASPAR yes 22235476
chr2 235399485 235399499 SPIC JASPAR yes 81884452
chr2 235399528 235399540 POU3F1 JASPAR yes 22235477
chr2 235399528 235399540 POU3F1 JASPAR yes 81884453
chr2 235399529 235399538 POU3F4 JASPAR yes 22235478
chr2 235399529 235399538 POU3F4 JASPAR yes 81884454
chr2 235399548 235399553 ETS2 TRANSFAC yes 22235479
chr2 235399548 235399553 ETS2 TRANSFAC yes 81884455
chr2 235399556 235399567 USF2 JASPAR yes 22235480
chr2 235399556 235399567 USF2 JASPAR yes 81884456
chr2 235399556 235399572 T JASPAR yes 22235481
chr2 235399556 235399572 T JASPAR yes 81884457
chr2 235399557 235399567 TFE3 JASPAR yes 22235482
chr2 235399557 235399567 TFEB JASPAR yes 22235483
chr2 235399557 235399567 TFEC JASPAR yes 22235484
chr2 235399557 235399567 TFE3 JASPAR yes 81884458
chr2 235399557 235399567 TFEB JASPAR yes 81884459
chr2 235399557 235399567 TFEC JASPAR yes 81884460
chr2 235399557 235399568 USF1 JASPAR yes 22235485
chr2 235399557 235399568 USF1 JASPAR yes 81884461
chr2 235399569 235399576 JUN TRANSFAC yes 22235486
chr2 235399569 235399576 JUN TRANSFAC yes 81884462
chr2 235399569 235399583 TCF7L2 JASPAR yes 22235487
chr2 235399569 235399583 TCF7L2 JASPAR yes 81884463
chr2 235399569 235399584 LEF1 JASPAR yes 22235488
chr2 235399569 235399584 LEF1 JASPAR yes 81884464
chr2 235399578 235399593 MYBL2 JASPAR yes 22235489
chr2 235399578 235399593 MYBL2 JASPAR yes 81884465
chr2 235399580 235399593 SMAD2 JASPAR yes 22235490
chr2 235399580 235399593 SMAD2 JASPAR yes 81884466
chr2 235399585 235399588 MYB TRANSFAC yes 22235491
chr2 235399585 235399588 MYB TRANSFAC yes 81884467
chr2 235399587 235399599 MYBL1 JASPAR yes 22235492
chr2 235399587 235399599 MYBL1 JASPAR yes 81884468
chr2 235399592 235399595 MYB TRANSFAC yes 22235493
chr2 235399592 235399595 MYB TRANSFAC yes 81884469
chr2 235399601 235399604 MYB TRANSFAC yes 22235494
chr2 235399601 235399604 MYB TRANSFAC yes 81884470
chr2 235399609 235399624 STAT1 JASPAR yes 22235495
chr2 235399609 235399624 STAT1 JASPAR yes 81884471
chr2 235399611 235399622 STAT1 JASPAR yes 22235496
chr2 235399611 235399622 STAT3 JASPAR yes 22235497
chr2 235399611 235399622 STAT1 JASPAR yes 81884472
chr2 235399611 235399622 STAT3 JASPAR yes 81884473
chr2 235399626 235399637 EBF1 JASPAR yes 22235498
chr2 235399626 235399637 EBF1 JASPAR yes 81884474
chr2 235399650 235399664 SPIC JASPAR yes 22235499
chr2 235399650 235399664 SPIC JASPAR yes 81884475
chr2 235399701 235399715 STAT1 JASPAR yes 22235500
chr2 235399701 235399715 STAT1 JASPAR yes 81884476
chr2 235399701 235399716 STAT2 JASPAR yes 22235501
chr2 235399701 235399716 STAT2 JASPAR yes 81884477
chr2 235399702 235399714 IRF1 JASPAR yes 22235502
chr2 235399702 235399714 IRF1 JASPAR yes 81884478
chr2 235399717 235399722 ETS2 TRANSFAC yes 22235503
chr2 235399717 235399722 ETS2 TRANSFAC yes 81884479
chr2 235399744 235399758 STAT1 JASPAR yes 22235504
chr2 235399744 235399758 STAT1 JASPAR yes 81884480
chr2 235399744 235399759 STAT2 JASPAR yes 22235505
chr2 235399744 235399759 STAT2 JASPAR yes 81884481
chr2 235399745 235399757 IRF1 JASPAR yes 22235506
chr2 235399745 235399757 IRF1 JASPAR yes 81884482
chr2 235399760 235399765 ETS2 TRANSFAC yes 22235507
chr2 235399760 235399765 ETS2 TRANSFAC yes 81884483
chr2 235399770 235399787 ZNF410 JASPAR yes 22235508
chr2 235399770 235399787 ZNF410 JASPAR yes 81884484
SNP sites on vista35278[chr2:235399360-235399773]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235399480 rs115368577 G T
SPI1
6453634
chr2 235399552 rs553693601 C CTTG
ETS2
6453635
chr2 235399618 rs543636880 A G
STAT1 STAT3
6453636
chr2 235399638 rs114187304 G A,T no 6453637
chr2 235399662 rs3115362 G C
SPIC
6453638
chr2 235399700 rs137980502 C A,G,T no 6453639
chr2 235399739 rs559536150 C G no 6453640
chr2 235399743 rs570014609 C G,T no 6453641
chr2 235399749 rs78861660 A G
IRF1 STAT1 STAT2
6453642
Genes possibly regulated by vista35278[chr2:235399360-235399773]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 235401685 235405697 - ARL4C ENSG00000188042.5 235405697 0.85 0.98 3276 94076
Expression level of Genes
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miRNAs possibly regulated by vista35278[chr2:235399360-235399773]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results