EnhancerDB
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  3. vista35279[chr2:235399833-235400404]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35279[chr2:235399833-235400404]
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Tissue distribution of vista35279
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Transcription factor that possibly regulate vista35279[chr2:235399833-235400404]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235399830 235399834 ESR1 TRANSFAC yes 22235509
chr2 235399830 235399834 ESR1 TRANSFAC yes 81884491
chr2 235399842 235399847 SP1 TRANSFAC yes 22235510
chr2 235399842 235399847 SP1 TRANSFAC yes 81884492
chr2 235399857 235399870 HSF1 JASPAR yes 22235511
chr2 235399857 235399870 HSF2 JASPAR yes 22235512
chr2 235399857 235399870 HSF4 JASPAR yes 22235513
chr2 235399857 235399870 HSF1 JASPAR yes 81884493
chr2 235399857 235399870 HSF2 JASPAR yes 81884494
chr2 235399857 235399870 HSF4 JASPAR yes 81884495
chr2 235399857 235399874 BCL6B JASPAR yes 22235514
chr2 235399857 235399874 BCL6B JASPAR yes 81884496
chr2 235399860 235399871 STAT1 JASPAR yes 22235515
chr2 235399860 235399871 STAT3 JASPAR yes 22235516
chr2 235399860 235399871 STAT1 JASPAR yes 81884497
chr2 235399860 235399871 STAT3 JASPAR yes 81884498
chr2 235399861 235399872 STAT1 JASPAR yes 22235517
chr2 235399861 235399872 STAT3 JASPAR yes 22235518
chr2 235399861 235399872 STAT1 JASPAR yes 81884499
chr2 235399861 235399872 STAT3 JASPAR yes 81884500
chr2 235399874 235399877 MYB TRANSFAC yes 22235519
chr2 235399874 235399877 MYB TRANSFAC yes 81884501
chr2 235399877 235399889 PBX1 JASPAR yes 22235520
chr2 235399877 235399889 PBX1 JASPAR yes 81884502
chr2 235399893 235399900 NKX3-1 JASPAR yes 22235521
chr2 235399893 235399900 NKX3-1 JASPAR yes 81884503
chr2 235399897 235399909 PKNOX1 JASPAR yes 22235522
chr2 235399897 235399909 PKNOX2 JASPAR yes 22235523
chr2 235399897 235399909 TGIF1 JASPAR yes 22235524
chr2 235399897 235399909 TGIF2 JASPAR yes 22235525
chr2 235399897 235399909 PKNOX1 JASPAR yes 81884504
chr2 235399897 235399909 PKNOX2 JASPAR yes 81884505
chr2 235399897 235399909 TGIF1 JASPAR yes 81884506
chr2 235399897 235399909 TGIF2 JASPAR yes 81884507
chr2 235399915 235399921 MZF1 JASPAR yes 22235526
chr2 235399915 235399921 MZF1 JASPAR yes 81884508
chr2 235399917 235399929 TEAD1 JASPAR yes 22235527
chr2 235399917 235399929 TEAD1 JASPAR yes 81884509
chr2 235399920 235399936 SOX4 JASPAR yes 22235528
chr2 235399920 235399936 SOX4 JASPAR yes 81884510
chr2 235399924 235399936 FOXI1 JASPAR yes 22235529
chr2 235399924 235399936 FOXI1 JASPAR yes 81884511
chr2 235399927 235399931 YY1 TRANSFAC yes 22235530
chr2 235399927 235399931 YY1 TRANSFAC yes 81884512
chr2 235399934 235399940 JUN TRANSFAC yes 22235531
chr2 235399934 235399940 JUN TRANSFAC yes 81884513
chr2 235399940 235399953 DUXA JASPAR yes 22235532
chr2 235399940 235399953 DUXA JASPAR yes 81884514
chr2 235399941 235399952 DUX4 JASPAR yes 22235533
chr2 235399941 235399952 PHOX2A JASPAR yes 22235534
chr2 235399941 235399952 PROP1 JASPAR yes 22235535
chr2 235399941 235399952 DUX4 JASPAR yes 81884515
chr2 235399941 235399952 PHOX2A JASPAR yes 81884516
chr2 235399941 235399952 PROP1 JASPAR yes 81884517
chr2 235399953 235399971 SRF JASPAR yes 22235536
chr2 235399953 235399971 SRF JASPAR yes 81884518
chr2 235399955 235399973 SRF JASPAR yes 22235537
chr2 235399955 235399973 SRF JASPAR yes 81884519
chr2 235399961 235399965 TEAD2 TRANSFAC yes 22235538
chr2 235399961 235399965 TEAD2 TRANSFAC yes 81884520
chr2 235399961 235399966 TBP TRANSFAC yes 22235539
chr2 235399961 235399966 TBP TRANSFAC yes 81884521
chr2 235399976 235399991 HNF4A JASPAR yes 22235540
chr2 235399976 235399991 HNF4A JASPAR yes 81884522
chr2 235399977 235399992 HNF4G JASPAR yes 22235541
chr2 235399977 235399992 HNF4G JASPAR yes 81884523
chr2 235399981 235399987 TCF4 TRANSFAC yes 22235542
chr2 235399981 235399987 TCF4 TRANSFAC yes 81884524
chr2 235400003 235400007 YY1 TRANSFAC yes 22235543
chr2 235400003 235400007 YY1 TRANSFAC yes 81884525
chr2 235400015 235400020 TFAP2A TRANSFAC yes 22235544
chr2 235400015 235400020 TFAP2A TRANSFAC yes 81884526
chr2 235400015 235400021 MZF1 JASPAR yes 22235545
chr2 235400015 235400021 MZF1 JASPAR yes 81884527
chr2 235400033 235400043 NKX2-3 JASPAR yes 22235546
chr2 235400033 235400043 NKX2-3 JASPAR yes 81884528
chr2 235400034 235400043 NKX3-2 JASPAR yes 22235547
chr2 235400034 235400043 NKX3-2 JASPAR yes 81884529
chr2 235400082 235400096 TCF7L2 JASPAR yes 22235548
chr2 235400082 235400096 TCF7L2 JASPAR yes 81884530
chr2 235400087 235400100 DUXA JASPAR yes 22235549
chr2 235400087 235400100 DUXA JASPAR yes 81884531
chr2 235400088 235400099 NFIL3 JASPAR yes 22235550
chr2 235400088 235400099 NFIL3 JASPAR yes 81884532
chr2 235400104 235400108 H1TF2 TRANSFAC yes 22235551
chr2 235400104 235400108 NFE TRANSFAC yes 22235552
chr2 235400104 235400108 SRF TRANSFAC yes 22235553
chr2 235400104 235400108 H1TF2 TRANSFAC yes 81884533
chr2 235400104 235400108 NFE TRANSFAC yes 81884534
chr2 235400104 235400108 SRF TRANSFAC yes 81884535
chr2 235400106 235400116 EMX1 JASPAR yes 22235554
chr2 235400106 235400116 EMX2 JASPAR yes 22235555
chr2 235400106 235400116 GSX1 JASPAR yes 22235556
chr2 235400106 235400116 HOXB3 JASPAR yes 22235557
chr2 235400106 235400116 LHX2 JASPAR yes 22235558
chr2 235400106 235400116 LHX6 JASPAR yes 22235559
chr2 235400106 235400116 MEOX1 JASPAR yes 22235560
chr2 235400106 235400116 MEOX2 JASPAR yes 22235561
chr2 235400106 235400116 POU6F1 JASPAR yes 22235562
chr2 235400106 235400116 EMX1 JASPAR yes 81884536
chr2 235400106 235400116 EMX2 JASPAR yes 81884537
chr2 235400106 235400116 GSX1 JASPAR yes 81884538
chr2 235400106 235400116 HOXB3 JASPAR yes 81884539
chr2 235400106 235400116 LHX2 JASPAR yes 81884540
chr2 235400106 235400116 LHX6 JASPAR yes 81884541
chr2 235400106 235400116 MEOX1 JASPAR yes 81884542
chr2 235400106 235400116 MEOX2 JASPAR yes 81884543
chr2 235400106 235400116 POU6F1 JASPAR yes 81884544
chr2 235400107 235400115 LBX1 JASPAR yes 22235563
chr2 235400107 235400115 PDX1 JASPAR yes 22235564
chr2 235400107 235400115 VAX1 JASPAR yes 22235565
chr2 235400107 235400115 VAX2 JASPAR yes 22235566
chr2 235400107 235400115 VSX1 JASPAR yes 22235567
chr2 235400107 235400115 VSX2 JASPAR yes 22235568
chr2 235400107 235400115 LBX1 JASPAR yes 81884545
chr2 235400107 235400115 PDX1 JASPAR yes 81884546
chr2 235400107 235400115 VAX1 JASPAR yes 81884547
chr2 235400107 235400115 VAX2 JASPAR yes 81884548
chr2 235400107 235400115 VSX1 JASPAR yes 81884549
chr2 235400107 235400115 VSX2 JASPAR yes 81884550
chr2 235400107 235400117 POU6F2 JASPAR yes 22235569
chr2 235400107 235400117 POU6F2 JASPAR yes 81884551
chr2 235400122 235400137 SOX21 JASPAR yes 22235570
chr2 235400122 235400137 SOX21 JASPAR yes 81884552
chr2 235400122 235400138 SOX4 JASPAR yes 22235571
chr2 235400122 235400138 SOX4 JASPAR yes 81884553
chr2 235400124 235400137 POU2F2 JASPAR yes 22235572
chr2 235400124 235400137 POU2F2 JASPAR yes 81884554
chr2 235400125 235400134 POU3F4 JASPAR yes 22235573
chr2 235400125 235400134 POU5F1B JASPAR yes 22235574
chr2 235400125 235400134 POU3F4 JASPAR yes 81884555
chr2 235400125 235400134 POU5F1B JASPAR yes 81884556
chr2 235400127 235400142 HNF1A JASPAR yes 22235575
chr2 235400127 235400142 HNF1A JASPAR yes 81884557
chr2 235400128 235400141 HNF1B JASPAR yes 22235576
chr2 235400128 235400141 HNF1B JASPAR yes 81884558
chr2 235400128 235400142 POU4F1 JASPAR yes 22235577
chr2 235400128 235400142 POU4F1 JASPAR yes 81884559
chr2 235400129 235400139 PAX3 JASPAR yes 22235578
chr2 235400129 235400139 PAX7 JASPAR yes 22235579
chr2 235400129 235400139 PAX3 JASPAR yes 81884560
chr2 235400129 235400139 PAX7 JASPAR yes 81884561
chr2 235400154 235400158 YY1 TRANSFAC yes 22235580
chr2 235400154 235400158 YY1 TRANSFAC yes 81884562
chr2 235400176 235400186 RUNX3 JASPAR yes 22235581
chr2 235400176 235400186 RUNX3 JASPAR yes 81884563
chr2 235400194 235400198 H1TF2 TRANSFAC yes 22235582
chr2 235400194 235400198 NFE TRANSFAC yes 22235583
chr2 235400194 235400198 SRF TRANSFAC yes 22235584
chr2 235400194 235400198 H1TF2 TRANSFAC yes 81884564
chr2 235400194 235400198 NFE TRANSFAC yes 81884565
chr2 235400194 235400198 SRF TRANSFAC yes 81884566
chr2 235400209 235400226 PAX1 JASPAR yes 22235585
chr2 235400209 235400226 PAX1 JASPAR yes 81884567
chr2 235400224 235400238 JUN JASPAR yes 22235586
chr2 235400224 235400238 JUN JASPAR yes 81884568
chr2 235400227 235400238 FOSL2 JASPAR yes 22235587
chr2 235400227 235400238 JUNB JASPAR yes 22235588
chr2 235400227 235400238 FOSL2 JASPAR yes 81884569
chr2 235400227 235400238 JUNB JASPAR yes 81884570
chr2 235400228 235400239 FOS JASPAR yes 22235589
chr2 235400228 235400239 JUND JASPAR yes 22235590
chr2 235400228 235400239 NFE2 JASPAR yes 22235591
chr2 235400228 235400239 FOS JASPAR yes 81884571
chr2 235400228 235400239 JUND JASPAR yes 81884572
chr2 235400228 235400239 NFE2 JASPAR yes 81884573
chr2 235400229 235400238 JDP2 JASPAR yes 22235592
chr2 235400229 235400238 JDP2 JASPAR yes 81884574
chr2 235400229 235400243 JUN JASPAR yes 22235593
chr2 235400229 235400243 JUN JASPAR yes 81884575
chr2 235400230 235400241 BATF JASPAR yes 22235594
chr2 235400230 235400241 BATF JASPAR yes 81884576
chr2 235400259 235400268 SRY JASPAR yes 22235595
chr2 235400259 235400268 SRY JASPAR yes 81884577
chr2 235400261 235400264 MYB TRANSFAC yes 22235596
chr2 235400261 235400264 MYB TRANSFAC yes 81884578
chr2 235400267 235400271 YY1 TRANSFAC yes 22235597
chr2 235400267 235400271 YY1 TRANSFAC yes 81884579
chr2 235400273 235400288 MEF2C JASPAR yes 22235598
chr2 235400273 235400288 MEF2C JASPAR yes 81884580
chr2 235400274 235400287 POU2F2 JASPAR yes 22235599
chr2 235400274 235400287 POU2F2 JASPAR yes 81884581
chr2 235400276 235400280 YY1 TRANSFAC yes 22235600
chr2 235400276 235400280 YY1 TRANSFAC yes 81884582
chr2 235400280 235400294 POU1F1 JASPAR yes 22235601
chr2 235400280 235400294 POU1F1 JASPAR yes 81884583
chr2 235400281 235400293 POU3F1 JASPAR yes 22235602
chr2 235400281 235400293 POU3F2 JASPAR yes 22235603
chr2 235400281 235400293 POU3F1 JASPAR yes 81884584
chr2 235400281 235400293 POU3F2 JASPAR yes 81884585
chr2 235400281 235400294 POU3F3 JASPAR yes 22235604
chr2 235400281 235400294 POU3F3 JASPAR yes 81884586
chr2 235400282 235400286 YY1 TRANSFAC yes 22235605
chr2 235400282 235400286 YY1 TRANSFAC yes 81884587
chr2 235400282 235400294 POU2F1 JASPAR yes 22235606
chr2 235400282 235400294 POU2F1 JASPAR yes 81884588
chr2 235400283 235400292 POU5F1B JASPAR yes 22235607
chr2 235400283 235400292 POU5F1B JASPAR yes 81884589
chr2 235400283 235400297 POU4F1 JASPAR yes 22235608
chr2 235400283 235400297 POU4F1 JASPAR yes 81884590
chr2 235400284 235400299 HNF1A JASPAR yes 22235609
chr2 235400284 235400299 HNF1A JASPAR yes 81884591
chr2 235400285 235400298 HNF1B JASPAR yes 22235610
chr2 235400285 235400298 HNF1B JASPAR yes 81884592
chr2 235400285 235400299 POU4F1 JASPAR yes 22235611
chr2 235400285 235400299 POU4F1 JASPAR yes 81884593
chr2 235400285 235400301 POU4F2 JASPAR yes 22235612
chr2 235400285 235400301 POU4F3 JASPAR yes 22235613
chr2 235400285 235400301 POU4F2 JASPAR yes 81884594
chr2 235400285 235400301 POU4F3 JASPAR yes 81884595
chr2 235400286 235400298 HNF1B JASPAR yes 22235614
chr2 235400286 235400298 HNF1B JASPAR yes 81884596
chr2 235400290 235400294 YY1 TRANSFAC yes 22235615
chr2 235400290 235400294 YY1 TRANSFAC yes 81884597
chr2 235400301 235400307 GATA3 JASPAR yes 22235616
chr2 235400301 235400307 GATA3 JASPAR yes 81884598
chr2 235400307 235400318 PROP1 JASPAR yes 22235617
chr2 235400307 235400318 PROP1 JASPAR yes 81884599
chr2 235400313 235400317 YY1 TRANSFAC yes 22235618
chr2 235400313 235400317 YY1 TRANSFAC yes 81884600
chr2 235400327 235400337 HOXC10 JASPAR yes 22235619
chr2 235400327 235400337 HOXD11 JASPAR yes 22235620
chr2 235400327 235400337 HOXC10 JASPAR yes 81884601
chr2 235400327 235400337 HOXD11 JASPAR yes 81884602
chr2 235400327 235400338 HOXA10 JASPAR yes 22235621
chr2 235400327 235400338 HOXC11 JASPAR yes 22235622
chr2 235400327 235400338 HOXC12 JASPAR yes 22235623
chr2 235400327 235400338 HOXD12 JASPAR yes 22235624
chr2 235400327 235400338 HOXA10 JASPAR yes 81884603
chr2 235400327 235400338 HOXC11 JASPAR yes 81884604
chr2 235400327 235400338 HOXC12 JASPAR yes 81884605
chr2 235400327 235400338 HOXD12 JASPAR yes 81884606
chr2 235400328 235400337 CDX1 JASPAR yes 22235625
chr2 235400328 235400337 CDX1 JASPAR yes 81884607
chr2 235400328 235400339 CDX2 JASPAR yes 22235626
chr2 235400328 235400339 CDX2 JASPAR yes 81884608
chr2 235400341 235400351 HESX1 JASPAR yes 22235627
chr2 235400341 235400351 LHX2 JASPAR yes 22235628
chr2 235400341 235400351 RAX JASPAR yes 22235629
chr2 235400341 235400351 HESX1 JASPAR yes 81884609
chr2 235400341 235400351 LHX2 JASPAR yes 81884610
chr2 235400341 235400351 RAX JASPAR yes 81884611
chr2 235400342 235400350 LHX9 JASPAR yes 22235630
chr2 235400342 235400350 SHOX JASPAR yes 22235631
chr2 235400342 235400350 LHX9 JASPAR yes 81884612
chr2 235400342 235400350 SHOX JASPAR yes 81884613
chr2 235400343 235400360 BCL6B JASPAR yes 22235632
chr2 235400343 235400360 BCL6B JASPAR yes 81884614
chr2 235400346 235400353 MEIS1 JASPAR yes 22235633
chr2 235400346 235400353 MEIS1 JASPAR yes 81884615
chr2 235400346 235400354 MEIS2 JASPAR yes 22235634
chr2 235400346 235400354 MEIS3 JASPAR yes 22235635
chr2 235400346 235400354 MEIS2 JASPAR yes 81884616
chr2 235400346 235400354 MEIS3 JASPAR yes 81884617
chr2 235400369 235400373 H1TF2 TRANSFAC yes 22235636
chr2 235400369 235400373 NFE TRANSFAC yes 22235637
chr2 235400369 235400373 SRF TRANSFAC yes 22235638
chr2 235400369 235400373 H1TF2 TRANSFAC yes 81884618
chr2 235400369 235400373 NFE TRANSFAC yes 81884619
chr2 235400369 235400373 SRF TRANSFAC yes 81884620
chr2 235400369 235400384 FOXA1 JASPAR yes 22235639
chr2 235400369 235400384 FOXA1 JASPAR yes 81884621
chr2 235400371 235400383 FOXC2 JASPAR yes 22235640
chr2 235400371 235400383 FOXC2 JASPAR yes 81884622
chr2 235400372 235400383 FOXB1 JASPAR yes 22235641
chr2 235400372 235400383 FOXC1 JASPAR yes 22235642
chr2 235400372 235400383 FOXB1 JASPAR yes 81884623
chr2 235400372 235400383 FOXC1 JASPAR yes 81884624
chr2 235400373 235400377 YY1 TRANSFAC yes 22235643
chr2 235400373 235400377 YY1 TRANSFAC yes 81884625
chr2 235400373 235400384 FOXA1 JASPAR yes 22235644
chr2 235400373 235400384 FOXA1 JASPAR yes 81884626
chr2 235400381 235400393 NHLH1 JASPAR yes 22235645
chr2 235400381 235400393 NHLH1 JASPAR yes 81884627
chr2 235400382 235400392 ID4 JASPAR yes 22235646
chr2 235400382 235400392 NHLH1 JASPAR yes 22235647
chr2 235400382 235400392 TCF3 JASPAR yes 22235648
chr2 235400382 235400392 TCF4 JASPAR yes 22235649
chr2 235400382 235400392 ID4 JASPAR yes 81884628
chr2 235400382 235400392 NHLH1 JASPAR yes 81884629
chr2 235400382 235400392 TCF3 JASPAR yes 81884630
chr2 235400382 235400392 TCF4 JASPAR yes 81884631
chr2 235400383 235400392 SNAI2 JASPAR yes 22235650
chr2 235400383 235400392 SNAI2 JASPAR yes 81884632
chr2 235400384 235400389 USF2 TRANSFAC yes 22235651
chr2 235400384 235400389 USF2 TRANSFAC yes 81884633
SNP sites on vista35279[chr2:235399833-235400404]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235400033 rs3105850 C T
NKX2-3
6453643
chr2 235400052 rs76547394 C T no 6453644
chr2 235400079 rs550960561 C G,T no 6453645
chr2 235400151 rs191242013 C T no 6453646
chr2 235400193 rs183044834 C T no 6453647
chr2 235400198 rs115074467 A G
H1TF2 NFE SRF
6453648
chr2 235400215 rs188530257 C T
PAX1
6453649
Genes possibly regulated by vista35279[chr2:235399833-235400404]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 235401685 235405697 - ARL4C ENSG00000188042.5 235405697 0.85 0.98 3276 94707
Expression level of Genes
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miRNAs possibly regulated by vista35279[chr2:235399833-235400404]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results