EnhancerDB
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  3. vista35280[chr2:235400661-235400783]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35280[chr2:235400661-235400783]
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Tissue distribution of vista35280
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Transcription factor that possibly regulate vista35280[chr2:235400661-235400783]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235400664 235400678 PLAG1 JASPAR yes 22235652
chr2 235400664 235400678 PLAG1 JASPAR yes 81884671
chr2 235400669 235400684 PRDM1 JASPAR yes 22235653
chr2 235400669 235400684 PRDM1 JASPAR yes 81884672
chr2 235400707 235400712 SP1 TRANSFAC yes 22235654
chr2 235400707 235400712 SP1 TRANSFAC yes 81884673
chr2 235400708 235400713 SP1 TRANSFAC yes 22235655
chr2 235400708 235400713 SP1 TRANSFAC yes 81884674
chr2 235400718 235400731 EOMES JASPAR yes 22235656
chr2 235400718 235400731 EOMES JASPAR yes 81884675
chr2 235400720 235400730 TBR1 JASPAR yes 22235657
chr2 235400720 235400730 TBR1 JASPAR yes 81884676
chr2 235400720 235400731 TBX20 JASPAR yes 22235658
chr2 235400720 235400731 TBX2 JASPAR yes 22235659
chr2 235400720 235400731 TBX20 JASPAR yes 81884677
chr2 235400720 235400731 TBX2 JASPAR yes 81884678
chr2 235400721 235400731 TBX21 JASPAR yes 22235660
chr2 235400721 235400731 TBX21 JASPAR yes 81884679
chr2 235400722 235400730 MGA JASPAR yes 22235661
chr2 235400722 235400730 TBX1 JASPAR yes 22235662
chr2 235400722 235400730 MGA JASPAR yes 81884680
chr2 235400722 235400730 TBX1 JASPAR yes 81884681
chr2 235400728 235400741 ZBTB18 JASPAR yes 22235663
chr2 235400728 235400741 ZBTB18 JASPAR yes 81884682
chr2 235400738 235400744 NFIC JASPAR yes 22235664
chr2 235400738 235400744 NFIC JASPAR yes 81884683
chr2 235400740 235400756 NFYA JASPAR yes 22235665
chr2 235400740 235400756 NFYA JASPAR yes 81884684
chr2 235400745 235400749 H1TF2 TRANSFAC yes 22235666
chr2 235400745 235400749 NFE TRANSFAC yes 22235667
chr2 235400745 235400749 SRF TRANSFAC yes 22235668
chr2 235400745 235400749 H1TF2 TRANSFAC yes 81884685
chr2 235400745 235400749 NFE TRANSFAC yes 81884686
chr2 235400745 235400749 SRF TRANSFAC yes 81884687
chr2 235400745 235400755 HOXB13 JASPAR yes 22235669
chr2 235400745 235400755 HOXB13 JASPAR yes 81884688
chr2 235400749 235400752 MYB TRANSFAC yes 22235670
chr2 235400749 235400752 MYB TRANSFAC yes 81884689
chr2 235400750 235400771 IRF1 JASPAR yes 22235671
chr2 235400750 235400771 IRF1 JASPAR yes 81884690
chr2 235400754 235400769 PRDM1 JASPAR yes 22235672
chr2 235400754 235400769 STAT2 JASPAR yes 22235673
chr2 235400754 235400769 PRDM1 JASPAR yes 81884691
chr2 235400754 235400769 STAT2 JASPAR yes 81884692
chr2 235400755 235400767 IRF1 JASPAR yes 22235674
chr2 235400755 235400767 IRF1 JASPAR yes 81884693
chr2 235400758 235400763 MYB TRANSFAC yes 22235675
chr2 235400758 235400763 MYB TRANSFAC yes 81884694
chr2 235400768 235400773 MYB TRANSFAC yes 22235676
chr2 235400768 235400773 MYB TRANSFAC yes 81884695
chr2 235400771 235400787 SOX4 JASPAR yes 22235677
chr2 235400771 235400787 SOX4 JASPAR yes 81884696
chr2 235400782 235400795 SMAD2 JASPAR yes 22235678
chr2 235400782 235400795 SMAD2 JASPAR yes 81884697
SNP sites on vista35280[chr2:235400661-235400783]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235400712 rs141316840 G A
SP1
6453654
chr2 235400729 rs13407074 G A,T
EOMES MGA TBR1 TBX1 TBX2 TBX20 TBX21 ZBTB18
6453655
Genes possibly regulated by vista35280[chr2:235400661-235400783]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 235401685 235405697 - ARL4C ENSG00000188042.5 235405697 0.85 0.98 3276 95086
Expression level of Genes
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miRNAs possibly regulated by vista35280[chr2:235400661-235400783]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results