EnhancerDB
  1. Home
  2. Enhancers
  3. vista35293[chr2:235952893-235953060]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35293[chr2:235952893-235953060]
Back to top
Tissue distribution of vista35293
Back to top
Transcription factor that possibly regulate vista35293[chr2:235952893-235953060]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235952903 235952917 SPI1 JASPAR yes 22236203
chr2 235952903 235952917 SPI1 JASPAR yes 81930890
chr2 235952905 235952918 ELF3 JASPAR yes 22236204
chr2 235952905 235952918 ELF3 JASPAR yes 81930891
chr2 235952909 235952914 ETS2 TRANSFAC yes 22236205
chr2 235952909 235952914 ETS2 TRANSFAC yes 81930892
chr2 235952935 235952940 SP1 TRANSFAC yes 22236206
chr2 235952935 235952940 SP1 TRANSFAC yes 81930893
chr2 235952964 235952968 YY1 TRANSFAC yes 22236207
chr2 235952964 235952968 YY1 TRANSFAC yes 81930894
chr2 235952992 235953004 TFAP2A JASPAR yes 22236208
chr2 235952992 235953004 TFAP2B JASPAR yes 22236209
chr2 235952992 235953004 TFAP2C JASPAR yes 22236210
chr2 235952992 235953004 TFAP2A JASPAR yes 81930895
chr2 235952992 235953004 TFAP2B JASPAR yes 81930896
chr2 235952992 235953004 TFAP2C JASPAR yes 81930897
chr2 235952993 235953004 TFAP2A JASPAR yes 22236211
chr2 235952993 235953004 TFAP2B JASPAR yes 22236212
chr2 235952993 235953004 TFAP2A JASPAR yes 81930898
chr2 235952993 235953004 TFAP2B JASPAR yes 81930899
chr2 235953008 235953013 MYC TRANSFAC yes 22236213
chr2 235953008 235953013 MYC TRANSFAC yes 81930900
chr2 235953012 235953023 NRL JASPAR yes 22236214
chr2 235953012 235953023 NRL JASPAR yes 81930901
chr2 235953025 235953029 H4TF2 TRANSFAC yes 22236215
chr2 235953025 235953029 H4TF2 TRANSFAC yes 81930902
chr2 235953030 235953049 RFX2 JASPAR yes 22236216
chr2 235953030 235953049 RFX2 JASPAR yes 81930903
chr2 235953034 235953050 RFX2 JASPAR yes 22236217
chr2 235953034 235953050 RFX5 JASPAR yes 22236218
chr2 235953034 235953050 RFX2 JASPAR yes 81930904
chr2 235953034 235953050 RFX5 JASPAR yes 81930905
chr2 235953056 235953067 SPDEF JASPAR yes 22236219
chr2 235953056 235953067 SPDEF JASPAR yes 81930906
chr2 235953058 235953063 GATA2 JASPAR yes 22236220
chr2 235953058 235953063 GATA2 JASPAR yes 81930907
SNP sites on vista35293[chr2:235952893-235953060]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235952994 rs571536193 C T
TFAP2A TFAP2B TFAP2C
6459153
chr2 235953007 rs114486294 C T no 6459154
chr2 235953058 rs569520811 A G
GATA2 SPDEF
6459155
Genes possibly regulated by vista35293[chr2:235952893-235953060]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 235860617 235964358 + SH3BP4 ENSG00000130147.11 235860617 0.71 1.0 3277 7724
Expression level of Genes
Back to top
miRNAs possibly regulated by vista35293[chr2:235952893-235953060]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results