EnhancerDB
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  3. vista353[chr1:11050864-11051128]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista353[chr1:11050864-11051128]
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Tissue distribution of vista353
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Transcription factor that possibly regulate vista353[chr1:11050864-11051128]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 11050865 11050875 FIGLA JASPAR yes 26765714
chr1 11050865 11050875 ID4 JASPAR yes 26765715
chr1 11050865 11050875 TCF3 JASPAR yes 26765716
chr1 11050865 11050875 TCF4 JASPAR yes 26765717
chr1 11050865 11050875 FIGLA JASPAR yes 118229870
chr1 11050865 11050875 ID4 JASPAR yes 118229871
chr1 11050865 11050875 TCF3 JASPAR yes 118229872
chr1 11050865 11050875 TCF4 JASPAR yes 118229873
chr1 11050866 11050881 RFX5 JASPAR yes 26765718
chr1 11050866 11050881 RFX5 JASPAR yes 118229874
chr1 11050870 11050881 STAT1 JASPAR yes 26765719
chr1 11050870 11050881 STAT3 JASPAR yes 26765720
chr1 11050870 11050881 STAT1 JASPAR yes 118229875
chr1 11050870 11050881 STAT3 JASPAR yes 118229876
chr1 11050874 11050885 NFKB1 JASPAR yes 26765721
chr1 11050874 11050885 NFKB1 JASPAR yes 118229877
chr1 11050875 11050880 ETS2 TRANSFAC yes 26765722
chr1 11050875 11050880 ETS2 TRANSFAC yes 118229878
chr1 11050880 11050892 TFAP2A JASPAR yes 26765723
chr1 11050880 11050892 TFAP2B JASPAR yes 26765724
chr1 11050880 11050892 TFAP2C JASPAR yes 26765725
chr1 11050880 11050892 TFAP2A JASPAR yes 118229879
chr1 11050880 11050892 TFAP2B JASPAR yes 118229880
chr1 11050880 11050892 TFAP2C JASPAR yes 118229881
chr1 11050880 11050895 TFAP2A JASPAR yes 26765726
chr1 11050880 11050895 TFAP2C JASPAR yes 26765727
chr1 11050880 11050895 TFAP2A JASPAR yes 118229882
chr1 11050880 11050895 TFAP2C JASPAR yes 118229883
chr1 11050881 11050890 TFAP2A JASPAR yes 26765728
chr1 11050881 11050890 TFAP2A JASPAR yes 118229884
chr1 11050882 11050891 TFAP2A JASPAR yes 26765729
chr1 11050882 11050891 TFAP2A JASPAR yes 118229885
chr1 11050886 11050897 E2F1 JASPAR yes 26765730
chr1 11050886 11050897 E2F1 JASPAR yes 118229886
chr1 11050887 11050892 SP1 TRANSFAC yes 26765731
chr1 11050887 11050892 SP1 TRANSFAC yes 118229887
chr1 11050917 11050923 MZF1 JASPAR yes 26765732
chr1 11050917 11050923 MZF1 JASPAR yes 118229888
chr1 11050925 11050938 NFKB1 JASPAR yes 26765733
chr1 11050925 11050938 NFKB1 JASPAR yes 118229889
chr1 11050926 11050937 NFKB1 JASPAR yes 26765734
chr1 11050926 11050937 NFKB1 JASPAR yes 118229890
chr1 11050927 11050937 RELA JASPAR yes 26765735
chr1 11050927 11050937 RELA JASPAR yes 118229891
chr1 11050938 11050948 NKX2-3 JASPAR yes 26765736
chr1 11050938 11050948 NKX2-3 JASPAR yes 118229892
chr1 11050939 11050948 NKX2-8 JASPAR yes 26765737
chr1 11050939 11050948 NKX2-8 JASPAR yes 118229893
chr1 11050940 11050950 ETV3 JASPAR yes 26765738
chr1 11050940 11050950 ETV3 JASPAR yes 118229894
chr1 11050949 11050961 E2F8 JASPAR yes 26765739
chr1 11050949 11050961 E2F8 JASPAR yes 118229895
chr1 11050950 11050956 NFIC JASPAR yes 26765740
chr1 11050950 11050956 NFIC JASPAR yes 118229896
chr1 11050951 11050970 CTCF JASPAR yes 26765741
chr1 11050951 11050970 CTCF JASPAR yes 118229897
chr1 11050953 11050964 FLI1 JASPAR yes 26765742
chr1 11050953 11050964 FLI1 JASPAR yes 118229898
chr1 11050954 11050962 EHF JASPAR yes 26765743
chr1 11050954 11050962 EHF JASPAR yes 118229899
chr1 11050955 11050967 INSM1 JASPAR yes 26765744
chr1 11050955 11050967 INSM1 JASPAR yes 118229900
chr1 11050962 11050966 LFA1 TRANSFAC yes 26765745
chr1 11050962 11050966 LFA1 TRANSFAC yes 118229901
chr1 11050971 11050983 ZBTB7B JASPAR yes 26765746
chr1 11050971 11050983 ZBTB7C JASPAR yes 26765747
chr1 11050971 11050983 ZBTB7B JASPAR yes 118229902
chr1 11050971 11050983 ZBTB7C JASPAR yes 118229903
chr1 11050972 11050987 TFAP2A JASPAR yes 26765748
chr1 11050972 11050987 TFAP2C JASPAR yes 26765749
chr1 11050972 11050987 TFAP2A JASPAR yes 118229904
chr1 11050972 11050987 TFAP2C JASPAR yes 118229905
chr1 11050974 11050987 TFAP2A JASPAR yes 26765750
chr1 11050974 11050987 TFAP2B JASPAR yes 26765751
chr1 11050974 11050987 TFAP2C JASPAR yes 26765752
chr1 11050974 11050987 TFAP2A JASPAR yes 118229906
chr1 11050974 11050987 TFAP2B JASPAR yes 118229907
chr1 11050974 11050987 TFAP2C JASPAR yes 118229908
chr1 11050975 11050986 EBF1 JASPAR yes 26765753
chr1 11050975 11050986 EBF1 JASPAR yes 118229909
chr1 11050975 11050987 TFAP2A JASPAR yes 26765754
chr1 11050975 11050987 TFAP2B JASPAR yes 26765755
chr1 11050975 11050987 TFAP2C JASPAR yes 26765756
chr1 11050975 11050987 TFAP2A JASPAR yes 118229910
chr1 11050975 11050987 TFAP2B JASPAR yes 118229911
chr1 11050975 11050987 TFAP2C JASPAR yes 118229912
chr1 11050978 11050989 ESRRA JASPAR yes 26765757
chr1 11050978 11050989 ESRRA JASPAR yes 118229913
chr1 11050980 11051000 TP53 JASPAR yes 26765758
chr1 11050980 11051000 TP53 JASPAR yes 118229914
chr1 11050982 11050986 LFA1 TRANSFAC yes 26765759
chr1 11050982 11050986 LFA1 TRANSFAC yes 118229915
chr1 11050987 11050999 INSM1 JASPAR yes 26765760
chr1 11050987 11050999 INSM1 JASPAR yes 118229916
chr1 11050996 11051009 ZBTB18 JASPAR yes 26765761
chr1 11050996 11051009 ZBTB18 JASPAR yes 118229917
chr1 11050998 11051008 NEUROG2 JASPAR yes 26765762
chr1 11050998 11051008 NEUROG2 JASPAR yes 118229918
chr1 11050998 11051010 TAL1 JASPAR yes 26765763
chr1 11050998 11051010 TAL1 JASPAR yes 118229919
chr1 11051005 11051024 REST JASPAR yes 26765764
chr1 11051005 11051024 REST JASPAR yes 118229920
chr1 11051016 11051030 PLAG1 JASPAR yes 26765765
chr1 11051016 11051030 PLAG1 JASPAR yes 118229921
chr1 11051040 11051059 REST JASPAR yes 26765766
chr1 11051040 11051059 REST JASPAR yes 118229922
chr1 11051041 11051054 TFAP2A JASPAR yes 26765767
chr1 11051041 11051054 TFAP2B JASPAR yes 26765768
chr1 11051041 11051054 TFAP2C JASPAR yes 26765769
chr1 11051041 11051054 TFAP2A JASPAR yes 118229923
chr1 11051041 11051054 TFAP2B JASPAR yes 118229924
chr1 11051041 11051054 TFAP2C JASPAR yes 118229925
chr1 11051043 11051054 EBF1 JASPAR yes 26765770
chr1 11051043 11051054 EBF1 JASPAR yes 118229926
chr1 11051055 11051063 MEIS2 JASPAR yes 26765771
chr1 11051055 11051063 MEIS3 JASPAR yes 26765772
chr1 11051055 11051063 MEIS2 JASPAR yes 118229927
chr1 11051055 11051063 MEIS3 JASPAR yes 118229928
chr1 11051092 11051107 HNF4A JASPAR yes 26765773
chr1 11051092 11051107 HNF4A JASPAR yes 118229929
chr1 11051093 11051108 HNF4G JASPAR yes 26765774
chr1 11051093 11051108 NR2C2 JASPAR yes 26765775
chr1 11051093 11051108 HNF4G JASPAR yes 118229930
chr1 11051093 11051108 NR2C2 JASPAR yes 118229931
chr1 11051094 11051098 H4TF2 TRANSFAC yes 26765776
chr1 11051094 11051098 H4TF2 TRANSFAC yes 118229932
chr1 11051096 11051109 NR2F1 JASPAR yes 26765777
chr1 11051096 11051109 NR2F1 JASPAR yes 118229933
chr1 11051117 11051137 TP63 JASPAR yes 26765778
chr1 11051117 11051137 TP63 JASPAR yes 118229934
chr1 11051119 11051134 TP53 JASPAR yes 26765779
chr1 11051119 11051134 TP53 JASPAR yes 118229935
SNP sites on vista353[chr1:11050864-11051128]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 11050962 rs77922821 G C
CTCF EHF FLI1 INSM1 LFA1
77500
chr1 11050965 rs147623173 G A
CTCF INSM1 LFA1
77501
chr1 11051012 rs138659541 GGCAT G
REST
77502
chr1 11051024 rs74055026 T G
PLAG1 REST
77503
chr1 11051066 rs116299845 C T no 77504
chr1 11051067 rs142194534 G A no 77505
chr1 11051094 rs143689961 T C
H4TF2 HNF4A HNF4G NR2C2
77506
Genes possibly regulated by vista353[chr1:11050864-11051128]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 11006528 11042094 - C1orf127 ENSG00000175262.10 11042094 0.96 1.0 142 91230
chr1 11072414 11085796 + TARDBP ENSG00000120948.11 11072414 0.7 0.99 143 78714
chr1 11086580 11107290 - MASP2 ENSG00000009724.12 11107290 0.99 0.99 144 43838
chr1 11114641 11120081 - SRM ENSG00000116649.5 11120081 0.82 1.0 145 31047
Expression level of Genes
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miRNAs possibly regulated by vista353[chr1:11050864-11051128]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results